Array 1 3824723-3822842 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRLW01000001.1 Rubripirellula obstinata strain LF1 LF1_contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================ ================== 3824722 28 100.0 32 ............................ GTTAACGCAATTACCGCGAAACAATCGAATGC 3824662 28 100.0 32 ............................ GCAAAGCGCACAACGTGCTCCGGCAGCCATCG 3824602 28 100.0 32 ............................ TGTTCAGCCACCGCTATCTACGGCAATTGAGC 3824542 28 100.0 32 ............................ ACATCGCGATCGTTCGGTTCGCTGGTGTTGTT 3824482 28 100.0 32 ............................ CGATTCAGGCAGCGAATCAAGCTTCGCCAGTT 3824422 28 100.0 32 ............................ CCGTTCCAGTACGAAAGCAATAACACTGGCAT 3824362 28 100.0 33 ............................ AATCAGGCCGGACGCCACCTCCGGTACAACATT 3824301 28 100.0 32 ............................ ACCGACGGGAAATCTACGACAAGATTCAGCAA 3824241 28 100.0 32 ............................ AGTTACCGGCGAGCAAGGATGGTTCTCGGTTG 3824181 28 100.0 32 ............................ GATTTTTGCGTGCTTTCGCGCGACCCTCCGAG 3824121 28 100.0 32 ............................ TTGATAAAACCAACACGTCATTCCCTTTCGTT 3824061 28 100.0 33 ............................ GTCGATGATGTCGCCGCTCAATTGGCGGAATAC 3824000 28 100.0 33 ............................ GCTGTTTGGTACTGCTAACAATGCAGGATCAAT 3823939 28 100.0 32 ............................ TCACGGTCCGCAAAGTACTCCCAAGGCCCGTT 3823879 28 100.0 32 ............................ TCACGGTCCGCAAAGTACTCCCAAGGCCCGTT 3823819 28 100.0 32 ............................ TCGCGGTAGGTAAACGTGGCATTCGTCAAACG 3823759 28 100.0 33 ............................ GCTGACAAAGGTACGCGTTCTAATGCGTGTCGT 3823698 28 100.0 32 ............................ CCCCATCATCACAAACATAGGATCCGCATGCG 3823638 28 100.0 32 ............................ ACCATCGTAGAGGCTACGTGAATGCGGAACTT 3823578 28 100.0 32 ............................ GCTCGCTTGGTGTCCCGCCGGCGAATTTGACT 3823518 28 100.0 33 ............................ TGTATCGGCGGCTCGAAAAACTAGGTGTGCCTT 3823457 28 100.0 32 ............................ ATTGCTAAGGCAGCAAGTTGGGAAATCATGTC 3823397 28 100.0 32 ............................ AAAGGACTGCGTCTGAATGTGGAGTTGCCATT 3823337 28 100.0 32 ............................ TACCTGAAGCTGCTCAAGGAAACCGAAGGCAA 3823277 28 100.0 32 ............................ ATGAATTGAAATCGGCAAGCGTGGCTAAGGCT 3823217 28 100.0 32 ............................ TTCTTTGGAGTGCGCGACAGACGAAAGTGCCG 3823157 28 100.0 33 ............................ AACCCGCGCCATCGATCATCCGCGACACTGCAC 3823096 28 100.0 32 ............................ TACAGCGGCGCACCGAACAGGGCTAGGCAAAT 3823036 28 100.0 32 ............................ CGCCAGCCGATGCAAGGCTGACGGGCTCTATC 3822976 28 100.0 80 ............................ TACAACAATTCGCCGATGGCGGCACCCGCCAACGTTCGCTGCCGACCAGGCATAAACACGGCGGAGGGCCGCCATGCTAC 3822868 27 75.0 0 ...............A...-.G.C.GTC | ========== ====== ====== ====== ============================ ================================================================================ ================== 31 28 99.2 34 GTTCGCTGCCGAGCAGGCAGCTTAGAAA # Left flank : GATGATTTGTTGCAATTGAACTTGTCGAACCGTCTTTCGCGGCTGCTGGACTATGTTCATTTGACTTCGGTGCGAAAGCTGGAGCGAAAGATCAATCGCTATGCCGTTTACAAACGTTGCCAAACCAAGAGTTCGCGAGACCGATTGATTCGGCGTCAAATGAAGCGAAAAGGGCTTGATCAGGCCACGGCACAGGCCGAGTACGCAACGTTCAAACCACGGTATTCGCAATTGCCTTACGTCAACATGCGAAGTCACAGTACAGCCCAGCGATTTCGACTATACATCGAGCGCAGCATGGCCGAAGCTGGAGAGGATTGGTGCTTCAGTACCTACGGTTTAAGTGGAACGACGGCCGTTCCAGAGTTTTAACCCTTTTTCCTAAGAGTCGAGAAAACATCGTAAAAACATGCCTTCTTCGATCATTACCAAAAAAGGGTCGCACCACCCAAGTCGTGATCCACACCGCCTTTCACGTTGTTTCTACCCAGAGAAGGCGA # Right flank : TTGCCACCTATAGTCTTGCCAAGTTTTGAGCATGTATCCCCCCGGCACCTTTTTTCCGACGCGTCGGAAGCCTGCGGCTCAGGGAACAACTAGATGGTTGATGATCTGACTCAACAATTTTCGGCGCATGCGTTGCGCAGTAAAAGTGAAAACGATGTTGCGCTGAATACCAGACTGAATGACGGCCGCGAATCATCGTTTTGCCCCTTCATCGTTTTGCCCAGAAAATCAGCGGACTAAGTAGCCCGCGAAAGGTCTTTGCTTCGGTCTGGCATGGGTAGCTGACAAGCATTAAAACCACTGCTTCGTTGGTGTCGTTTGCCGAGGGAGTAGGGAAATGTTGGGGAGTAGAGAAATGTCAGATTCTAAACCAAGAAAAGTGTTTTTTAGCCGGCAACTGCCTGGGGTGGCACTTGATCGATTGGCGGCGGAGGCCGATGTGACGATTTGGCCGAAGGCTGATGCGCCGACGCCGGATGAATTGTCCGACGTGGTTCGAG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGAGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //