Array 1 34992-33399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEOW010000007.1 Cedecea davisae strain CSURP8687 NODE_7_length_268405_cov_33.625, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 34991 28 100.0 32 ............................ GGTGCTCTCGCCTGGCACTTTTACAGCACACA 34931 28 100.0 32 ............................ AAAACAGAAGACTATCTCGCGCTGGGCGAATA 34871 28 100.0 32 ............................ ACCGGGGACTCCACCCGCGTTCCGGGATTGGC 34811 28 100.0 32 ............................ GTCATGCTGTACACCCGCCCCGCTCTCGTAGC 34751 28 100.0 32 ............................ CAGCCCATTTACCAGTCGTGCGGCGTCAGCAC 34691 28 100.0 32 ............................ TGCCAGCGAGCCAAGGCTTGATTCAGAATAAC 34631 28 100.0 32 ............................ AGCGGCATCACTTTCAACGATTGTCTATCAGG 34571 28 100.0 32 ............................ AATAGACGGAATCATGATATTTGAGATCATCG 34511 28 100.0 32 ............................ ATTCAGTCCAGTTGTTGGTCCAATTGATCGCG 34451 28 100.0 32 ............................ TGCGGTCATAAACAAACGGTGCATTCCATGGA 34391 28 100.0 32 ............................ GCGATGGCGTCTTCCATGTTAATGACGTAGCG 34331 28 100.0 32 ............................ AGAAGGGGCGCAAGTTCCTGGAGTCAATGAAA 34271 28 100.0 32 ............................ TCGTAAATTTGGGCTGATTGCCGTCTCACTGG 34211 28 100.0 32 ............................ GTAACCAGTATGGGATCATCTTTCCCAAGCAA 34151 28 96.4 32 .......T.................... TTAAGGAAGGGGACTTCAACTTCATCCTGCCC 34091 28 100.0 33 ............................ GTAGAGCATGTTGAATGTGTCTGTGTTGTAGCG 34030 28 100.0 32 ............................ AGACGGAACGCCAGAAGGCGATCAAACGTTAT 33970 28 100.0 33 ............................ AACGATATAAACCGGATCGTCACTTTTAAACGC 33909 28 92.9 32 .........T......A........... ATAAACGGCGCATTCAGCCCGTTTATGTCTGC 33849 28 100.0 32 ............................ GAGAAGAAAACATTCTTAGAATCAGCCGACTT 33789 28 100.0 32 ............................ ATTGATACGCACTCCCGTTTTTAGCGTGTAGA 33729 28 100.0 32 ............................ CGAATAATCCTCAGCCGATTCCAGCAAAGACA 33669 28 100.0 32 ............................ TACTACGGCAACGTTGCAAGCGAGAAGTTATT 33609 28 100.0 32 ............................ TCCACGGTGCCGCCAGCGGCGCGGATTGCTTC 33549 28 100.0 32 ............................ CGAATGACGGCGGGTGTTCGTTTAGGCGTAAT 33489 28 96.4 32 .................T.......... TTCACAGCTAATGGGCAAGCCTCCAGCTCAGC 33429 28 85.7 0 ...........C..C.....A.....G. | TA,A [33403,33408] ========== ====== ====== ====== ============================ ================================= ================== 27 28 98.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TAACCATCCCCGCCCCTGGGTGATGATAAGCGTCTGCCCGAGGGGATGGGTATGCCAGGCGGTACGTGCGCCGGGTTCGAAAGTCACCGTAGCGCCGCCCACGCGGGCGTTATCGCTGCCGCTGAACGGAGCATCGATACGAACCGTACCGGTAAAATAATTCTCAGGCCCTTTTTGCGAGGGCAGCGAGCCACTGCGGGTAATTTTCATCGTCTTCTCCGGGTAGAACGTTACTGTGCGTAGAAATACAGTAGACCCGATCCAGAAAGGGCACTAGCCGGTGAAATCTGCAAGAACCTATGAATGGGATTCATGAGTGTTGCTATCTGCGGAGATATTTGTACCGGGTAAATTGTCAGCGGCTTGCAGACCCTATTTTTGAGTTGTTCTGTAACTTATTGATTTTTATTGGCGTTAACCACTGTGGATAAAAAAGGGGTTGATGCAGAGAAGTAAGGGCTTTTGTTATTGCAGCAATGGGTTAGCTATGGAAAACTGCG # Right flank : TATTACTCAATTTTCAGGGTAAAAAGGTGATTTAAGTAAAATCATTTTTATTAAATTAGTTGTGGTTTTAAATTATTACTTTATTTTTAATACGTACTCAGTCTTCAGGTAAGAATCGCGCTATATTAATTTCGCATGAGTATGCCGTATCACTTACATGGATGTGATGATGATGTTAATGCCTTCAGATTTGAAAACTATTCTGCATTCTAAGCGCGCAAATATTTATTACTTACAGTATTGCCGGATTCTGGTTAATGGCGGTAGGGTTGAGTATGTTACGGATGAGGGTAAGTCGTCTTTATACTGGAACATTCCGATCGCCAATACAACGGTTGTTATGCTGGGAACAGGCACGTCGGTTACTCAGGCCGCTATGCGGGAGTTTGCCAGGGCCGGAGTATTAGTAGGGTTTTGTGGCAGCGACGGGACACCACTTTATTCTGGTAATGAAATCGATATTGATGTTTCATGGATTACCCCGCAAAGCGAATATCGCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //