Array 1 185251-183171 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHD010000002.1 Streptococcus gordonii strain DFI.4.79 EKONJGNN_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 185250 32 100.0 34 ................................ AGAGTTGAAGCGCTTGGGCTTGAAAAAGCAAAGA 185184 32 100.0 34 ................................ ACGCTTGAACTTCGCAACAATCGGAGACGCTATT 185118 32 100.0 35 ................................ CCTAAACTAAATGAAACACTAATTGTTGAAACAGT 185051 32 100.0 34 ................................ AGATATTGATAATTATGAAAACGGTAACTTTATC 184985 32 100.0 34 ................................ TTATGAACCTTGGTATGATGACCGCAAGGACTAC 184919 32 100.0 36 ................................ ATGCTGAGTATGTAGATAGCATGGTTCAAGAGCTTT 184851 32 100.0 34 ................................ AAAGGAAAACATAGCTACAAAATTACAACCAAAC 184785 32 100.0 36 ................................ CTTTGACTGGCACGCCTTCGATCTCACCATAGACAA 184717 32 100.0 35 ................................ ATCATGGCTGATGTGTTATCCACAACTGCTTGGTT 184650 32 100.0 34 ................................ TTTTTCTTTATCCATAATCTCCACTCTACCTAAA 184584 32 100.0 34 ................................ TGTATCATTTTTAAAAATAAACCGATTGTGTTTT 184518 32 100.0 34 ................................ TCCTTTTTATAATTCAATGTCATATAGGCCAGGG 184452 32 100.0 36 ................................ TTTAAACGCATAAGCCGTGTAATGCTCTTTAAAAAA 184384 32 100.0 35 ................................ TAGAGAGGGCTACTATTTTTTTACTGACTGAGATT 184317 32 100.0 34 ................................ TCCTGCTTCCCCGGCAGTTCGGTAATTTTTAAGC 184251 32 100.0 34 ................................ CGTAAATTGTATCATTTTGTCGTTTGTAGGATAT 184185 32 100.0 32 ................................ TTGTCATTTATCAGTACGGCTACGGTTGCTGA 184121 32 100.0 35 ................................ TTGCGCGGTATTAATGCTGCAGGAGTTGAATTAGC 184054 32 100.0 35 ................................ AAGAGCTTCAACCATTGCTTGAATCATTTTCTTAG 183987 32 100.0 35 ................................ ACGGCTTTGTTGACTTTTTCGGTAATGATAGCGTC 183920 32 100.0 35 ................................ AAAACGAAGTTTTAGGCTCAGGATTTGACATTGAC 183853 32 100.0 35 ................................ ATTGCATGGTAGCGGATAATAAAGGCTTTTCCCTC 183786 32 100.0 34 ................................ TGAACTGACTGATTTTAAGCAGAAAGTGCAGACT 183720 32 100.0 34 ................................ CTTGCAAAAGAGCTACTAGATCGGCCTTCTTAGC 183654 32 100.0 33 ................................ TGTTACATTTAAAAACGGCGTCGTTCAGATGGA 183589 32 100.0 34 ................................ AGGTATTTGGAACGGTATCAGCTCAACTGCATCT 183523 32 100.0 36 ................................ CTTGGCCAAAACCAAGGCGGAGAAGCTGGGCCTAAT 183455 32 100.0 35 ................................ ACCAACTGTTTTTGCTTTTAGAAATCCTTTAAAAC 183388 32 100.0 33 ................................ TGTATCATTTCCAAGTGAAGCCATAAGAAAAGC 183323 32 87.5 23 ...........................TT.TA GGGCTTTGTTGCGTTGCCCTTGT Deletion [183269] 183268 32 100.0 34 ................................ TTCTGCCATAGTAGGCCTCCTGCATTTGATATTC 183202 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 32 32 99.6 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : CCAAGACAATCCGTGGAGAATTGGAATCCTATCCACCATTTTTGATATAGGAGCTAGTTAATGATGGTATTAGTAACATATGATGTGAATACTGAAACTGCGCAAGGCAGGAAAAGACTACGTCATGTGTCAAAATTATGTGTTGATTATGGGCAACGCGTTCAGAATTCAGTTTTTGAATGCTCAGTAACTCCTGCAGAATTTGTAGAAATAAAAGCTAAGCTTTTGAGTATAATTGACACTGAGTCTGACAGTATTCGTTTTTATTTGCTAGGAAAAAACTGGCAAAATCGCCTAGAAACAATTGGACGTGATACAAGTTATGATCCTGATATAGGCGTACTACTCCTTTAAATTACTTAGTGCGAATAGTGGTTACTCATAAAAAAGTAGGGCATTCGCGCGAAAAACAAACAAAAATAAGGTAAAAATTCAAAAATATAGAGGAGTTATCTCTCCTTGAAAAATAATTTTTACCTAAAACAGTGCAATTACGCGCT # Right flank : TCAATGATTGATCGTGTAACTCGTCTATGCTATAAGGTAGCTTCCTTCATTTTGAAAATTTTCATGAACCCAAGATACTTATTTATTATTTATATAATATATTTAGTTGTTCTCTTTCATATCTATCCAAAAAAAAACCACCTATTAGGTGGTTTTTTTCAGTATCTATCACTGCTTACTAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGAAGCGCTCGATAGCTTGGAGCATCAAAGAGATCAATAGTCGATTCGCCCTTGCGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAGGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTTGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //