Array 1 1073988-1067221 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTLL01000001.1 Coprococcus sp. AM14-16 AM14-16.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1073987 32 100.0 34 ................................ ATATTTATAAAACCCGCAAAGAGGGGATTATACA 1073921 32 100.0 34 ................................ TGCATGATAAAGATGAAAATAAGGACGGAGAACT 1073855 32 100.0 34 ................................ CTTTTTATAAACTTTTAATCTATTTTGTAGCAAT 1073789 32 100.0 34 ................................ TGGAGTGTAACAATCGGTGCAATAGTTGTTATTG 1073723 32 100.0 34 ................................ AATCTTACAAGCGCAGATATAGGAAGTGTTACAA 1073657 32 100.0 34 ................................ CTCAATATTTTCAAACCTTGTCTAAATGACCTTA 1073591 32 100.0 34 ................................ ATTAGAGTTTCTTAACCACAAGTGCAAGGTTCTG 1073525 32 100.0 36 ................................ ATGCAACAATTCACTTGCAAGGCTTTGTGTGTCACC 1073457 32 100.0 33 ................................ ATTATATATAGTCCCCCTCTCCCATCTGTGATA 1073392 32 100.0 34 ................................ ATAAAGTGATGTGTCGCCCCATATATTTGCACTC 1073326 32 100.0 33 ................................ ATATTTGGACTATAGTCCATTTAAGCAAGCACA 1073261 32 100.0 35 ................................ AGATGGTAATACAATAGCATCTGATACTGAGTGTT 1073194 32 100.0 34 ................................ ACAACTCTGATGGAACGGTAAGTTTTGAAGATGT 1073128 32 100.0 36 ................................ CACTATGTCAAGTATTTAACACCTGTCGTGGAAAAT 1073060 32 100.0 35 ................................ TGAAATAATCGGCAAAACATAAGTTGAAATGAATG 1072993 32 100.0 34 ................................ CGTAAGAAAACAAAGTGTGATATACTGATTAAAA 1072927 32 100.0 33 ................................ TGCATGGCTGGGACGGTTCGGAATGTATATATT 1072862 32 100.0 35 ................................ AAATAAAAATCATACCAGATACAAGGAGGAAAGCC 1072795 32 100.0 34 ................................ CACATAGGGGACCTGCATACAAGTTGCACATATA 1072729 32 100.0 34 ................................ GTTTCTGTGACCGTCTGTGTTGCTGTACCGCCCG 1072663 32 100.0 34 ................................ CTGCAATACCTCCAAGCGGTCCCAGTGCTGTTTT 1072597 32 100.0 34 ................................ CTAAAAAGCCGTTGACAATGGACTGCTTCACGCC 1072531 32 100.0 35 ................................ ATTCTTGAAAAGTTCCCACTTGTAGAAAAAATGCT 1072464 32 100.0 34 ................................ TGAATATTTTGACGAGTTAGGTTGTAGAGATTTT 1072398 32 100.0 35 ................................ TTCCCGTAAGAAGGGCAAAAAAATTGCCGAGTTTG 1072331 32 100.0 33 ................................ GGTTTTAATGCAACGGTTGACTACTCATTACCG 1072266 32 100.0 36 ................................ TATAACGGGTGCGGGTTGGAGTATTGACAATGTGCC 1072198 32 100.0 34 ................................ TCCACGTTAGATACCGCTCACAATCTGAATGACA 1072132 32 100.0 34 ................................ AGTAAGGTAAAAAAGGATAAGGCAGGAAATATAG 1072066 32 100.0 33 ................................ GGCTATATCAGTCTTGAATAAGATCCCAAAGGT 1072001 32 100.0 35 ................................ CTAAGACACTTTTCCCACTGCTCATGTGTCGCCTC 1071934 32 100.0 34 ................................ TGCTGTGGCTGTGGATTGTACCCCATGAGTGCCG 1071868 32 100.0 36 ................................ TTTGTCATAGCTACTGTTACATCGCCGGCGGTAGAT 1071800 32 100.0 33 ................................ TTGTCTGTTACTGCAGCAATATCTGCTAATGAT 1071735 32 100.0 33 ................................ TTGCCAAGTACCTCGCAAACCTCGGAAAGTGTC 1071670 32 100.0 34 ................................ TTCTTGCTATTGTAGGCCTTTGTGCTGATTCCAA 1071604 32 100.0 34 ................................ ATAGACACCGGGCGCAAGCGTAACCGTGATTTTG 1071538 32 100.0 35 ................................ AAGTAATTTGAGCAGATACTTCACCCGCTTTAGAT 1071471 32 100.0 34 ................................ GTATGTTATCGCTGAGGGGTGGACAGACGCAAGC 1071405 32 100.0 34 ................................ TCAAATGAAACGGCTAAGTTTGCACAATTATTTG 1071339 32 100.0 34 ................................ CTAAACAGGCAGACAATGAAACTGTCCTTGCTGG 1071273 32 100.0 34 ................................ CTTATGCTTGAAATACTTGTATATATCTACCGCA 1071207 32 100.0 33 ................................ CATCAGCCAGATGTAAGCGTGAGACTTTTTGAT 1071142 32 100.0 34 ................................ TGATATGTACTCATATGTACTATCAACCGTAGGA 1071076 32 100.0 35 ................................ TCAAGTGCCTATGTCAGCGTATGACGTTAGCGCAA 1071009 32 100.0 33 ................................ ATAAAATGTTTAACAAATATTCAACACTTTACC 1070944 32 100.0 33 ................................ GTCGTGAGACTAACAGTTTCCAAGACGGGCAAT 1070879 32 100.0 35 ................................ TGTTGTTGCTCGTATATTGACGAACGTGGCGTCTA 1070812 32 100.0 34 ................................ ACTATGTCAAGTATTTAACACCTGTCGTGGAAAA 1070746 32 100.0 33 ................................ TTGTACTTATAGCGATAGAGCTAATGGTGTGGA 1070681 32 100.0 33 ................................ ACGATGACTTGCTGAGGCGATTAGCTACGTTAT 1070616 32 100.0 35 ................................ GGCATTGGCATTGTCATTTGATATAGAAACATCAA 1070549 32 100.0 34 ................................ TTTTGTTTCATACGCATCTAGCACATTTTTTACA 1070483 32 100.0 34 ................................ ATATCTTGTAGTGATGCAGGAGACAGCACACTTA 1070417 32 100.0 35 ................................ CTAAATGGTATACCTCGTTAGCATTCCCGCACTCT 1070350 32 100.0 34 ................................ ATTTTATAACAAACCCTTACAGAAAACTTAAATT 1070284 32 100.0 33 ................................ ATTATTATTTATAGCGGGTTCACCATTTTTTTT 1070219 32 100.0 33 ................................ TTTATGAAACTTCTGGCTCAAAACAGTATGGAA 1070154 32 100.0 33 ................................ AGAAAGATAGGTGGCTCATATACTGCTTCAGCG 1070089 32 100.0 36 ................................ CAGTGTAGGAGCTTGTCCACCTTCGGTTCAGGGAGC 1070021 32 100.0 34 ................................ TCCGTCATAGACAGCTCATTCATCAGCGTTTTAT 1069955 32 100.0 34 ................................ ATATTATACCTCCTTGATTTACTCGGCTCTGGCG 1069889 32 100.0 35 ................................ AAGAAAGACCAGGATGCACCATACATCACGATTGA 1069822 32 100.0 35 ................................ AGAAAGTATATGGAGATCAGCGTATTTTACAAAGA 1069755 32 100.0 34 ................................ CATGTACCTACAAGAAATTCCAGAGTTTAAAACA 1069689 32 100.0 34 ................................ TTTCAATAATATCTCAAATGACTCGTCTATGACT 1069623 32 100.0 35 ................................ ATACGAAGATATACGGCTAACAGAGTTACAAATAC 1069556 32 100.0 34 ................................ TTTGAAGAGCAGACATTAAGGCTTGACCAGATAT 1069490 32 100.0 34 ................................ ACTATTTGTATGAAGAAAGAGTGAAGGCTGCACT 1069424 32 100.0 36 ................................ ATGGTGGTTGCTCCGGGATCCTGGAATCAGCTTGAG 1069356 32 100.0 33 ................................ TTGGTTATAGATGTGGGCTCCGCATCGGTGAGG 1069291 32 100.0 34 ................................ CTCAGCCTTTGAAACGAAGAATACCTCCTTGTCC 1069225 32 100.0 34 ................................ TTTACCTCTCCACCCCAATTTATAGTTGGCTGAA 1069159 32 100.0 34 ................................ ACAAGCATATTCATAACCATCAGCTTGAGCATGA 1069093 32 100.0 33 ................................ TGGGAGTATACCACTATGCAAATGGCGGAGATC 1069028 32 100.0 34 ................................ TACCTGATGATGTGGCGAGAACAATAGCAAATAT 1068962 32 100.0 35 ................................ TAGGAAAGATGTGGCAAAAGTGCCACTTATATATC 1068895 32 100.0 34 ................................ GCGATTTTTGAAGAGGAAAACGGCCGGGCGCGCT 1068829 32 100.0 34 ................................ TTGCTCTCCCAGTCAAGTACAATGACAGCTTTTC 1068763 32 100.0 33 ................................ ACAAAGGCGTCAATGACAAGCAAGTCCCCAACC 1068698 32 100.0 33 ................................ GGTTGATTACCCTATCAAACCATAGGGAGCTCA 1068633 32 100.0 34 ................................ ATTATACATCTGACATATAGCTGCGATAGTGTTA 1068567 32 100.0 34 ................................ GACTTTAAAAAGGAAGCAGAGGTAAAACAGAGCC 1068501 32 100.0 33 ................................ ATCAGCGCTGTCGGCCATGATATCAAGTGTCAG 1068436 32 100.0 35 ................................ TCCGAGGATCCAGCCAGATGCGGCATCCTGTCCCA 1068369 32 100.0 33 ................................ TGCAGGTGATCCAGCTTTATCTGACGCATTGGC 1068304 32 100.0 32 ................................ TCAATGTTCGGAATTTTTACAGTGTTGTTGTA 1068240 32 100.0 33 ................................ TGTTGTATGTCATTTTGCCTCCATGTACCAGTA 1068175 32 100.0 33 ................................ ATATAGCTATCAATGGCAGAATTGATATATTCA 1068110 32 100.0 33 ................................ CTCAGACCGTTTTTATTACATAAAAATGAAATT 1068045 32 100.0 33 ................................ TTAATATGTGGCTTGGTCGGTATGCTTTTGTAC 1067980 32 100.0 34 ................................ ACCAGAAGCACCTGATGCAACATCTGGCCCAGCT 1067914 32 100.0 34 ................................ ACAGAATGGCGATCAGATGTGTATAGCTAGATAT 1067848 32 100.0 35 ................................ TTATTTGATTGCACCAAGCAAAGAATATTTGAAAC 1067781 32 100.0 34 ................................ AACAAAGTTCCGTTACTTAAAGTAATTGATTCCA 1067715 32 100.0 35 ................................ ACCGAGATTACGTCGTGGCAGGGTGTTGCGTCAAC 1067648 32 100.0 34 ................................ TAGTTTTTTGTTTGCGCTGGAGATTGATGATGAG 1067582 32 100.0 33 ................................ TAAACAGTTGGAAACAGCACATATATTATTTGA 1067517 32 100.0 35 ................................ TTAAATGGAGTATATTCGATAAATGCAGGAATGAG 1067450 32 100.0 33 ................................ CGTTCAACAACACCAAGGCAGGCACAAAGGAAG 1067385 32 100.0 34 ................................ AAAGGTACGTGTTCATTTTGACATAGTAGATAAA 1067319 32 100.0 35 ................................ ACAAGTAGTCGGATATAAAAACCTTGAAGAAATTA 1067252 32 93.8 0 ....A...............A........... | ========== ====== ====== ====== ================================ ==================================== ================== 103 32 99.9 34 GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Left flank : TATCCGGTTTTTTTATGGAAATGAGGTGATAAGAATGTTATTGTTGATAACCTATGATGTTAATACGGAAACATCTGCAGGGAAAAATAGATTGAGAAAGGTTGCAAAACAATGTGAAAATTATGGTCGACGAGTACAGAATTCAGTTTTCGAATGTATAGTGGACCAAGCACAGAGCGTTAAATTGAAAGCCTTGTTATCTGAAATAATTGATGATACAGTGGACAGTCTTAGGTTTTATTATTTGGGAAGTAAATATCAAACTAAAGTTGATCATATAGGATGTGATAAGGGGATAGATGTTGATCAGCCATTAATTTTTTGATATTGTGCGTAATGATAGTGAACATAGAATTACAGGGGCATTCGCACCATGAAAAATATACAGTTGAGAAGCTTATCTATGTATATATGCATAAGGAACAGATTTTATTGTAAAAAACAATAATATTATTAAGCGGTTTTGTATAGAATTTTAGATTTTTTTGTGCAAAATTGCT # Right flank : CCAAATATTCGGGAGGTAGATTATGGCAGCACGCCTTGCCATTCGGGAAAAGCAGTTAGAGACTTGGATTGCAAATATTAAGGACTGCAGGAACAGCGGTATGAAAACAAAGGGCTGGCTTGCTGAAAATAACATATCAAAAGATCAGTATTACTACTGGTTCAAGCAGCAGAGACTGGCAGTGTGCATGCAGTCCTCTGGTTTTCAACCAGAATTGCCTGTTAAATCGGAGAAAACACAGATAGTCAAATTGGAATGCACTGATTATCAGTTTACAATGTAAATTTATAGAATGATGATATATTAAGGGAGAAAGAGATATGAATGATAAGACAAATGCTTTAAAATCCGCCATCTACGGCCTCGCCGTAGGTGATGCGTTGGGCGTTCCATATGAATTTAAATTCAGGGGCGCATTTGAATGTACAGATATGATAGGCTACGGTACGCACAATCAGCCGGAGGGAACCTGGTCGGATGATACCAATATGGCGCTTGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCGTTCGTCGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //