Array 1 1912928-1912025 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPKU01000001.1 Devosia enhydra strain ATCC 23634, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1912927 32 100.0 35 ................................ TACATCCGCGCCGGCCGCCCAAAGTGCCACGAGCG 1912860 32 100.0 36 ................................ GTCGCATCAACGACGTGAAGCGCACGGGGCAGGCGT 1912792 32 100.0 35 ................................ TACATCCGCGCCGGCCGCCCAAAGTGCCACGAGCG 1912725 32 100.0 36 ................................ GTCGCATCAACGACGTGAAGCGCACGGGGCAGGCGT 1912657 32 100.0 37 ................................ ACGGCAAAGCGGAACACGGGCTCGCTGACAGCGGGGG 1912588 32 100.0 36 ................................ GATATGCACGGGTGCTTGGGCATCCTCCCACCCGTC 1912520 32 100.0 34 ................................ CTCGACACCCTTTCGGACCCCTTCGAAGCGGTCG 1912454 32 100.0 34 ................................ TCAGCCATCTTGGCTGCGATCCGTTCGAGCTCGG 1912388 32 100.0 33 ................................ CGCGTGCTTTGTGGCGATTGGGCGAAGGCTGCG 1912323 32 100.0 35 ................................ CCCCATACGCGGGTGATCTCGCCATCCCCGGCCGC 1912256 32 100.0 37 ................................ TGGCGCCACGAGAACTTCGCCCACATCGTGCCGGACT 1912187 32 96.9 33 .........G...................... GGCTGGATCGAGAAAGGCCCAAGCGAGGCCGTC 1912122 32 96.9 35 .............A.................. GTGGCATCGGCGACTGCGACAATGCTGTCTGCCTC 1912055 31 93.8 0 ...A.......................-.... | ========== ====== ====== ====== ================================ ===================================== ================== 14 32 99.1 35 GTCGCCCCTCCCACAGGGGCGTGGATCGAAAC # Left flank : CCTCCCACAGGGGCGTGGATCGAAACGTCGATGAATACCTCGTCGACCTCAACGCCACGCAGGGTCGCCCCTCCCACAGGGGCGTGGATCGAAACCCAAGCCGAAGCGGACTGTAGGCGTAATCATAGCGTCGCCCCTCCCACAGGGGCGTGGATCGAAACTACTGGACGCATGGCGCGACCACCACGAACTTCGGTCGCCCCTCCCCACAGGGGCGTGGATCGAAACGGCAGCATCGGCAGGCCCGCTATCTCCCTCGCGTCGCCCCTCCCACAGGGGCGTGGATCGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CTTCGCGAAGGCATCAAGCACTATCCCAGCCGGCGATCACCCCGCCCTCCAGCTGGGAAAAGGATCAGGCAACTGGCTCCAGACGTCGGGCAGCATCTGGCGGGCCGGCACGAGGCAGGCATCGAGGTCGCGGCGGATGCGCGCTTCGTCCATCGGGTTGGTGCCGATGAACACGAGCTCCTGCCGGCGGTCGCCCCAGACCGGGTCGATATAGGGCTGCATCGCGGCGAGCCAGTCCGGATCGTCCGGCCAGCGGCGGCGCGGTACCGCAGCCCACCACAACCCGCGCCGCCCGGTGCGCACCAGAGCGCCGGCCTGGCTCAGTTCGCCGACATGGTCGGGCCGCGTCGCCAGCCAGAAAAACCCCTTGGCTCGCACCACGCCGGGCCAGGGGCGGGCGATGAATTTTGCCAGCAGCACCGGGTTGAAGGGCTGGCGGGCGCGGTAGACGAACGCGCGGATGCCATACTCTTCGGTTTCGGGCACATGGTCCGAAAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCCCACAGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.20,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1913414-1913124 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPKU01000001.1 Devosia enhydra strain ATCC 23634, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1913413 24 75.0 37 --------........................ GTCGATGAATACCTCGTCGACCTCAACGCCACGCAGG 1913352 32 100.0 34 ................................ CCAAGCCGAAGCGGACTGTAGGCGTAATCATAGC 1913286 32 100.0 34 ................................ TACTGGACGCATGGCGCGACCACCACGAACTTCG 1913220 32 100.0 32 ................................ GGCAGCATCGGCAGGCCCGCTATCTCCCTCGC C [1913211] 1913155 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 5 32 95.0 34 GTCGCCCCTCCCACAGGGGCGTGGATCGAAAC # Left flank : C # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCCCCTCCCACAGGGGCGTGGATCGAAACTACATCCGCGCCGGCCGCCCAAAGTGCCACGAGCGGTCGCCCCTCCCACAGGGGCGTGGATCGAAACGTCGCATCAACGACGTGAAGCGCACGGGGCAGGCGTGTCGCCCCTCCCACAGGGGCGTGGATCGAAACTACATCCGCGCCGGCCGCCCAAAGTGCCACGAGCGGTCGCCCCTCCCACAGGGGCGTGGATCGAAACGTCGCATCAACGACGTGAAGCGCACGGGGCAGGCGTGTCGCCCCTCCCACAGGGGCGTGGATCGAAACAC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCCCACAGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.20,-5.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //