Array 1 987179-985831 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP041587.1 Acinetobacter baumannii strain J9 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    987178	    28	  85.7	    32	C.AAA.......................	CAACTGGTGAACGTGCTCAAGTAGTTATACCG	
    987118	    28	 100.0	    32	............................	ATCAGCCGTTTTGCCTGACTTACCAACGCCGT	
    987058	    28	 100.0	    32	............................	TACAGACAAGCCATTTACAGAAGTAACACAAA	
    986998	    28	 100.0	    32	............................	GTCATAGTCCTTCTGAACACCAAATGTATAAG	
    986938	    28	  92.9	    32	...TC.......................	GGTATTAGTGCGAATTGGCTTTTAGCCCACGC	
    986878	    28	  89.3	    32	....C.......GT..............	GTGTTTTTCGATATGCTTCGAAAGGTCATCCT	
    986818	    28	  89.3	    32	...TC.....A.................	TGATGGTTCAGCATATATAGCTAGACGTACAC	
    986758	    28	  82.1	    32	...GC......TGT..............	ATCACCAAACACAACCAAAGGTGAACGGGTAT	
    986698	    28	  92.9	    32	...GC.......................	TTATCTGCCATACCCGACTGCTTTGTTCCTAA	
    986638	    28	  85.7	    32	...GC.......AT..............	ATTTTTATTCCAAGGGCTTTTGCTTCTTGTGA	
    986578	    28	  82.1	    32	...GC......TAT..............	TTCAAATGATTTAATGAGCTTGTAGCCATTTT	
    986518	    28	  85.7	    32	...GC.......TT..............	ACGTCTTCTAATGATGGACTTTAATCCAATAT	
    986458	    28	  85.7	    32	A..GA.......T...............	ATCTCACTGAAGATATGACCATCACTTTCTTC	
    986398	    28	  89.3	    32	..CGC.......................	TTTATAACCACCAGTTAAAGTATTGACTAAAA	
    986338	    28	  75.0	    32	...GC.G...A.A..AT...........	ACAATCGGGGACGTGGTCAAAAAGATTATCAG	
    986278	    28	  89.3	    32	....A.......AT..............	GTGTTGATGTTGTTGTTCAGATCGTTTTTGGT	
    986218	    28	  85.7	    32	...GC....T..T...............	GACATGCGAGCTTTCATTTAAATGTGTCATCA	
    986158	    28	  96.4	    32	............A...............	ATTAAAGCATTTTCATATGAGCCTTCCTCATT	
    986098	    28	  92.9	    32	....A......T................	TTCGGATCAGTCCAGTCATCATCCTCGTCAAT	
    986038	    28	  82.1	    32	T..GT.......GT..............	TATCATTGCGCGACAGAACGCATCAATTAATG	
    985978	    28	  92.9	    32	...GC.......................	AGATCTATGCAAGATTTATTGGTCTACATTAG	
    985918	    28	  89.3	    32	...T........AT..............	CAAGCTGATGCTTCCTTATGGTTACAGTCAGG	
    985858	    28	  75.0	     0	..CGC.......AT..........AT..	|                               	
==========	======	======	======	============================	================================	==================
        23	    28	  88.7	    32	GTTCGTCATCGCCCAGATGATTTAGAAA	                                	       

# Left flank :   CGTGTGCAAATTTATGTTTTGCTCCGACAACCCATACTAGCTTCATTCTTCGCACACCAAAATTAATGTAAGCAGCTACCGCAGTTTGTCGGGTGGCTACTTTTTTTAATGCGCTTCGGATTTCTTTTAAGCCGTCCATTGTCATTGGTGCTTGCCAAGACGAATCTCCTGTACGAATAGCATAGCTATCCAAAATTGCTCTTGTTTTCTTTAAAGCTCTTTTTTCACAAGCAGAGATGAGAATGACATGCATAGTTTATTGTTAAAGTTTGAATGTAATAAAAATATAATCTTTTGTTTTAAAAAGAGAAAGTTTTTATCAGCTTAATACGGCCTTTTAACGACAAAATACGTCGTCTTAAATTTTGAAAGGAACTCTTTTAAATCATCTATGCGATGAATAACCCTGTGAAGGACTCTGATCACATCTAACGCAATTTCTAAATCATCTGGGCGATGAACAACCTCATTTCCACCGCCGACTAACGGCACAATGATTT
# Right flank :  TTTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA

# Questionable array : NO	 Score: 4.89
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.19,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGTCATCGCCCAGATGATTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:60.87%AT]
# 	Reference repeat match prediction:         R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [14-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.91   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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