Array 1 905-209 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUC01000014.1 Ligilactobacillus salivarius strain FYNDL2_4.scaf Scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 904 36 100.0 30 .................................... ACTCGTAATAGCTGAGTTTTCGCAACATAG 838 36 100.0 30 .................................... CTTAGGCGTTGTTTCTAGTACAGACGCAAC 772 36 100.0 30 .................................... TGGGCCCTAATAACTTATTCAAGTGGCTTA 706 36 100.0 30 .................................... AATTGGTGTATCCTGAAATCTACTTTTTGA 640 36 100.0 30 .................................... ACAACAAATGTTAGCAGTGGCTGACTTACA 574 36 100.0 30 .................................... CAATAATTGCATCTACCACGTCAATCTTAA 508 36 100.0 30 .................................... TTATAACAAGAAAGATTTTTATCAAAATAA 442 36 100.0 30 .................................... TGGTCAAGTCGTCAATCTCACTAGGTGTTA 376 36 100.0 30 .................................... TGGTCAAGTCGTCAATCTCACTAGGTGTTA 310 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 244 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.2 30 GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGTGAGATTTTGTATAAAATTGATATACCCTTACAAGCAGATTATGATAATGATTTAATAAGACTATTCAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAGTGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACT # Right flank : CTAAAATACAAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGAGTAAACACACTATAGTGTGACATTACAGATAAAAAGGCCCTCAAAATCACATTTTCCTAGTGATTTTGAGGGCCTTACTTTGTACAAATTTCTTTAACTTTAGAATTCCATGGCAAAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //