Array 1 11590-11361 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFJW010000114.1 Corallococcus exercitus strain CA046A NODE_114_length_24955_cov_36.9879, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 11589 31 100.0 29 ............................... GCCAAGCCGGCCGAAGGCGCCGAACCCGC 11529 31 96.8 38 ......G........................ CCGAAGCCCGAGGTGACGGCGGAGAGCGCTGAACCCGC 11460 31 100.0 38 ............................... GCCAAGCCGCCGGAGGGCGCCGCGCCCGCGGAGCCCGC 11391 31 93.5 0 ...C..G........................ | ========== ====== ====== ====== =============================== ====================================== ================== 4 31 97.6 35 CGCTCCCAAGAAGCGCGGCCGTCCGCCCAAG # Left flank : GCGGACGTGGAGGAGATCTACGCGTTCCTCCGCTCGGACAGTGACAAGGCGGACCTGGACTGGAAGCAGCGCGCGCGCACCAACCTGGACCGCATGACCCAGGGCGGCATCCTGGGGCTGGCGGAGGTCGTCAAGGGCCTCCAGGTCCTGAGTGAGCTGCGGCCGCTGCCCACCAAGGAGCGCGAGCTCTACGACAACGCCCGGCACCTGCTGGTGTCGGAGGTCGCCGCCGCGCTGGGCACCGCCGAGGCCAACGCCGAGGACTCCATCGACATCGTCCTCTTCCCGCCCGGGAAGGAGCGTCCCAAGCGCACCGCCGCGGAGTTCGCGCGGCCCGGTGGCGACGAGGACGACATGGACCTGGACGGCGACCTCATGGGTCTGGAGGGCGGAGAGCTGGACCTGCCCTCGGACGAGGAGCCGCAGGCCGAGTCCGAATCCGAGGAGGAGACCTCCGAGGAGGGTGGCGAGGAGGAAGGCGGCGAGGAAGGGGCCGAGGA # Right flank : GCGAAGCCCGCCGAGGACGAGTGAACCGCAGGACTCCACGGCCCTCCGGCCGCCCGCGTCGCGCCCCAAGCGCGCGCCCGGCACCGCGAGGGCCCTCCCGCCGAGGTGACGCCCCGTGATTCGCGTCGTGACGCTGGACCCCTTCGACGACAAGCAGCTCGCCAAGTTCAACCGCACGCTCTACACGGCCTTCGGCGTGGGCAGCGAGCACAGCGGCTCCGCGGAAGTCCCCGCGGGCATGTCCGAGCCCCTGGACGCGGAGAAGCTGCTGGATGAGGTGAAGGGCATCCGGGCCTACAAGGACGACAAGGTGCTGCTGCTCACCTCGCGCAAGCTGAAGGACCGGGACCTGCCCAGCGGCAAGGCGCCCACGTCCGGCTTCGCGCGGTACGGCAAGGACCGGGCGGTGCTCTCCATCGCGCCGTTCAAGGACCTGGAGAAGGACTTCAAGCCCATCGCGCGCCACGCGCTGCACCAGCTGGGCACGCTCTGGGAGCTGC # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCTCCCAAGAAGCGCGGCCGTCCGCCCAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 2198-2380 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFJW010000302.1 Corallococcus exercitus strain CA046A NODE_302_length_12026_cov_29.0149, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 2198 38 100.0 35 ...................................... GGGCGAGGCCGCGCTGGTCCGGCTGAGGAGCTGAG 2271 38 94.7 34 ..T..................G................ CCTGGAGCCGCGCTGGTCCGGCTGAAGCGATGGA 2343 38 97.4 0 .....A................................ | ========== ====== ====== ====== ====================================== =================================== ================== 3 38 97.4 35 AACTGGTCCGACAGTCGGACCAGTTCGCGCCGTCCGGG # Left flank : GCCAGTGGAGGAGCACCTGTCCCCACGCAACCGCGAGCACCTCCAGCACACGGCCCGGGAGGTGCATCGGCTCGCGAAGCGAAGCCTGGACCTGTCGCGCCGATACCCGGATGCGGGTGTGCTTCATGCCCGGCAGCGGACGCTCATCCTGATGAACCAGCTCTGCAACGAGCTGTTCACCATGTCCGTTACGCTGGCCCACGCGGCGGCCCTGACTTCACGGGGACAGCCTCACGCCGATGCGCTGGCGGACGTCTACTGCACCGCCGCGCGCTATCGGCTGGAGGATCTCTGGCGCCAGGCCGACGCCGACGCGGAGCCGGACTTCGCGGGCGTGAGCGAGCGGTGGCTGACAGGCGACACGCTCGACTTCCTGCTGAGCGACGTGCTCATCCGGCGGTGAGGCTCACGGCGCCTGAACGGTTCGCCGTGTCGTCCTCGTGAAGAATCTCCTTTGGCCTCATACGGGCCTTGGCACCCGGCCGGGGGCGCCTCAGGTC # Right flank : GGCCTCGGGCCGCGCCTGCCCGCAAGTGATGAGGACGAGCTGGCATCGCGCCCAGGTCAGCCCTTCTTGCGATGTGACGTGCTCCTCCGGCGGTGTGACGCTCACGGCGCGGCGCGCGAACAGGCCGCCGTGTCGTCGCGCTGGATGACGCCCTCCTTCATCACGAAGAAGACCTTCTGCGTGACGCGGATGTCCTTCAGCGGATCGCCCGGTACGGCGACGACGTCCGCCAGCTTCCCGGGCTCCAGCGTCCCCAGCCTGTCCGCCACGCCCAGCAGCTCCGCCGCGTTCACCGTGGCGGTGCGCAGGGCCTCCGCCGGCGTGAGGCCTGCCTCCACCAGCAGCGCGAACTCCTGCGCGTTACGGCCGTGCTCGAACACTCCCGCGTCCGTGCCGAAGGCGATGCGCACACCCAGGGAGATCGCCTTGCGCAGCACGTGCTCCCTTCGCTTGTCCACGGCGCGCAGCTTGGCGACGGTGTCAGGAGTCAGCTTGCCCTG # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACTGGTCCGACAGTCGGACCAGTTCGCGCCGTCCGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.60,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 20114-20281 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFJW010000141.1 Corallococcus exercitus strain CA046A NODE_141_length_21514_cov_32.5442, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =============================================== ================== 20114 25 100.0 46 ......................... CTCTACGCGACCCGAACGGAGCAGCCGCCCCCGAGGCCGCGGATGC 20185 25 100.0 47 ......................... GTTCTCGCGGCCCGGGTGGGGAGGCAGCCTCCGTCCGGCGCGGTGGT 20257 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= =============================================== ================== 3 25 100.0 47 CCAAACCTGTCCGACAGTCGGACAG # Left flank : GCGAAGCCCCGTACTCGGGGACGCAGGCCGTGACCGCGAGGGTGGGGCCGGACGCGTTCCCGCTGCCCCGGAGGGTGGACGACGAGGGCGCCGTGAGGGACACGGCCGACGCGGGGCGGCCCGGAGCACCGGCCCCCGGGGTGATGGTCAGCGCCGCGGACGCGTCCCGGGCCCGGCAGCATGCACTCGTGGGGCCACGAGGCCTCGCGATGGAGGGACGGCTCGACGAGCCCTCATCGACAGGGGACCTGCCGCACCCGCCGGGCTTCTACTTCGCGGTCATCTCCCACGGCTTCGGCGTGATGCCCGCCTACGGCCCACAGCTCACGCCCCATGAGCGCTGGGCCGTGGTCGCGTACCTGCGAGCGCTGGGCCGCAGCCAGCGAGCACCCCTCGCCGCCGCCCCGCCCGAAGTGCAGGCACGGCTGCGCCAGGAGGTCCAAGGACCATGAGGACCCCACGGACCTTCATGTTGTACCCCCACCGTCCGACACGGCGGT # Right flank : GGTTTTCGTGGACCGCCGCCGGCGGGGAGCCTCTGCCGGGTTCTCACCTTCTCATCCGTGGGGACGGTCTCCCTGCACGAGGGCCTGGCCCCTGCGTCCTTCGCTGCCTCCGCCGCTCGGTTGCGATCCGGTGAGGAGGTCCGCGCGCCATGACGCCTCCCGTGCTCCCACGCTTCGAGGGCGGACGGCGCGCGCTGGGCATCAGCGCGGCGCTCGGGGTCGTGGGCCTTGGGGCCACCGCCATCGGTGCTTTCCTCGACGTGCGTCAGGCCCTGGCGGGCTACCTCTTCGGGTTCACCTACTGGCTGGGGCTCAGCCTGGGGGCGCTGTTGCTGCTCGCCTCCTTCCACGCGTCCAAGGCGCGTTGGCCCGTGGTGCTGCGCCGCGCGCTGGAGGTCACGGCCGCCCTCGCGCCGCTGTTCCTGCTGCTCTTCGTGCCCCTCGCGCTGGGGATGCGGCACCTGTTCCCGTGGGTCGCGCCCTCCGCGAACCTGGGCGCG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAAACCTGTCCGACAGTCGGACAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //