Array 1 110838-112325 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLRB01000036.1 Streptococcus iniae strain QMA0191 NODE_1_length_170929_cov_125.502_ID_4233, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 110838 36 100.0 30 .................................... AAGCGGAACAGATGACAATATATGATTTTT 110904 36 100.0 30 .................................... TCGATTGGAACAGGTTTGACATTATAAACT 110970 36 100.0 30 .................................... TGCTTGGTATGCAAATGCATTAAACGGTCC 111036 36 100.0 30 .................................... ATGAAAAAATTACCGAACTGCCGGGAAAGC 111102 36 100.0 30 .................................... CGAAAGGTACTATAACCGATGAAGATATTA 111168 36 100.0 30 .................................... GGTCAGATACGCTCAAGGTCAAACAATTGT 111234 36 100.0 30 .................................... GCACTAGCAACAGACCAAGACTCGCACGGA 111300 36 100.0 30 .................................... TTTAGAGAGATAGCTTTGTTTTGTATCTTC 111366 36 100.0 30 .................................... TATGGAAAATGTTGACTTCCACGGTAAATC 111432 36 100.0 30 .................................... TTTGATACGATCTATGTCAGCGAGCATTTG 111498 36 100.0 30 .................................... GTTTTAGCTTTTTTAAATTCTTCTTGCTTC 111564 36 100.0 30 .................................... GTGGCATTTTTGGAAATAGTTAGACAATTA 111630 36 100.0 30 .................................... AGGTGTCAAACTTATCACAGCTCTTGTTCA 111696 36 100.0 30 .................................... ACAATTATTTTATGTCAGATATTGATGAAT 111762 36 100.0 30 .................................... GTGTTCGCCGAATAAGTAGAATTAAGAAGC 111828 36 97.2 30 ..........................C......... CCTGCAAAAGATTCATATGCGATTAGTTAT 111894 36 100.0 30 .................................... CAAGTCTTGCAACAACAAGTATCCACTACA 111960 36 100.0 30 .................................... ATATATATCAATGGAAATACCAAAACGTTT 112026 36 100.0 30 .................................... TTAATTCCTTGGTTGTCAGTGTAATAGATA 112092 36 100.0 30 .................................... CGGTTTAGCTGCTCTTGAGAAGATTGTATT 112158 36 100.0 30 .................................... TTAGTATTAAATATAATATCAACACCTTTA 112224 36 100.0 30 .................................... TACAACAGTACCTATAAGTGTGGCTACACC 112290 36 75.0 0 ................T.....TG..T.T.TTT..G | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 98.8 30 GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Left flank : AACCAGAAGTAAAATCAATGATCGAAAAACTTGCTGCAACTATTACCGAATTAATTGCTTATGAATGTTTAGAAAATGAGTTGGATTTAGAATTCGATGAAATCACAGTTTTAGAGCTAATTAAGGCCTTAGGTGTAAAAATTGAAACTCAAAGCGATACGTTTTTTGAAAAATGTCTGGAAATCGTACAAATATTTAAATATTTAACTAAAAAGAAGTTACTAGTTTTTATTAATAGTGGAGCATACTTTACTAGAGATGAATTTGAGAAACTGTTAGAATATATTAGTTTGTCTAGTCAACCAGTCTTATTTTTGGAATCAAGAAAGATGTATGATTTTCCTCAATATGTTTTAGATGAAGATCTTTTTATGCTAACTGAAAATATGGTATAATAGTATTAAGAAAGACAATAGTAATTAAAAGGATCATCAAGATAGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTGTAGAAAAAATTTAGCTACGAG # Right flank : GGCAATATTTCCCATTTGAATAACTTACATATTCGGAAACCGCTTTCAAAAATAGTTTTTTTATGCTATACTGATAAAAAAGCTAAGTGAGGGCATTATGGAAAAAACCTTTTTTATGATTAAACCAGATGGTGTTAAGCGGGGGCTGATTGGTCAGGTTCTTGAACGTATTGAGCGTAGGGGTTTTGTGATTGAGAAGTTGGAATTGCGTCAGGCTGATGCAGCAATTCTGAGAAAACATTATGATTTTCTGGTTGATAAACCGTTTTTTCCAGAGATTGAGGCTTACATGACAAGTGGTCCTCTGTTGATTGGTGTTTTGTCAGGCAATCGTGTGGTCTCTTCCTGGCGTATGATGATGGGGGTTACAAATCCTAAAGATGCCCTGCCAGGAACAATTAGAGGAGATTTTGGGCAAGCGCCAGGAGACGATGGTGGCATTCAAAATGTGGTGCACGGTTCAGATTCTATCGACGCTGCAAGACGTGAAATTGATATCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //