Array 1 522621-524723 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622296.1 Lachnoanaerobaculum saburreum DSM 3986 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 522621 28 100.0 34 ............................ CTATACATTCAGAGAAAACGGCATGGCTGTAGCA 522683 28 100.0 33 ............................ CAGGATAAAAAAGAAATTCCCAAGCCAAGTGAT 522744 28 100.0 33 ............................ CTTAACGCCTTGTACTGAAGTTGCAGTTTGTCC 522805 28 100.0 33 ............................ TACCGCTACATTGAACACCTCAATTTTTAAGCA 522866 28 100.0 33 ............................ CGAATTGCAGTTAGGCAAAGTATATATATTTGT 522927 28 100.0 33 ............................ TACTTCATCAAGCTTATTGAATGTATAAGGCAA 522988 28 100.0 33 ............................ CTTGCAGATGATGATGCGCCGCTTGCGACTCCG 523049 28 100.0 33 ............................ CCTGTAAGCTTTCTAGCTATAGAACTAAGACAG 523110 28 100.0 33 ............................ CAAAACTTGCAAGACCTTTCGCACCATCGATTA 523171 28 100.0 33 ............................ TGAGAAGCTACAGCCTTTAGCACTATTTGCAAG 523232 28 100.0 33 ............................ CCCTTGCCATCTCCATTCCCTCCGCAAGGCCTA 523293 28 100.0 33 ............................ TAGAATGTATGTATTATTTAAAAACGGCTGGTA 523354 28 100.0 33 ............................ CCCGAAACGCTGGGAATTTGAAATTGTGGATAA 523415 28 100.0 33 ............................ CTGCTAACAAATAATCCTTTATTGTTGCCTTAC 523476 28 100.0 33 ............................ CGACTTTGTCAACGCCTTTTTGTCGTTTTTACG 523537 28 100.0 33 ............................ CATACATACATTTGTATACCATCTGAGGCTTGA 523598 28 100.0 33 ............................ TCGACCAGTTTAACCTTAAATCTCTTCAAGCAC 523659 28 100.0 33 ............................ CAGGCGCCTGCAGTGCCAAAGTCTGCAAAGCCT 523720 28 100.0 33 ............................ CATCTATGCGTAAAGTATATGGTGCATTGCCCG 523781 28 96.4 33 ..............A............. TATCCTCTTCGGCAAGCCACTTTGTAAGTACAG 523842 28 96.4 33 ..............A............. CGCTTCTTAAAAGTATTGGAAGTATCCCACTGT 523903 28 96.4 33 ..............A............. CTCGGCAAATTTGATTGACTGGAAGGCAAATTT 523964 28 96.4 33 ..............A............. CTTAACAGGATTCTGGCCACTATGGATGAAAGT 524025 28 96.4 33 ..............A............. CTTAACAGGATTCTGGCCACTATGGATGAAAGT 524086 28 96.4 33 ..............A............. CAATCCTGACTTTATGATAGCAGCATTTAAAGC 524147 28 96.4 33 ..............A............. CTTAACAGGATTCTGGCCACTATGGATGAAAGT 524208 28 96.4 33 ..............A............. TCTATCATCCACTGATACTTATAAGTCATTTTA 524269 28 96.4 33 ..............A............. TGGCAAGTGATGAAGCGAGTGTTTGGTATTTAT 524330 28 96.4 33 ..............A............. CTTTGCTACAGAAAACGGGGGTAACAGCACAGG 524391 28 96.4 33 ..............A............. TAGAATGAACTCTGTGCAAATGCATTATTCTTA 524452 28 96.4 33 ..............A............. TTGATACAGAGGATTTTGTAAAAGAGCTGATAA 524513 28 96.4 33 ..............A............. TGGCAAATAAGGATATTATACCGGATACAGTTA 524574 28 96.4 33 ..............A............. CAAACAGCAGAACAATAGATAGAAAAAGGAGGC 524635 27 92.9 33 .......................-..T. TTGTTTTTTAATCCCGAAATTGAATACAATTTA C [524660] 524696 27 92.9 0 .......................-..T. | C [524721] ========== ====== ====== ====== ============================ ================================== ================== 35 28 98.2 33 GTGTTCCCCGCGTATGCGGGGGTGATCC # Left flank : AATGAAAAAAATGTTATTATTGAGGTAGGGGCAATAAAATCTGTAAGCGGAGTACTTAGTGAGTTTCAAAGTTTGGTAAATTATGAAGGCACTTTGCCGAAGCATATAGTTTCATTAACCGGCATTACAACTGATATGTTAAAAAAAGACGGCAGTGATATAGTTGTAGTTTTAAAAGACTTTGTGGATTTTCTGGGTGACTTGGATATTATCGGATATAATATAGGATTTGATATTGACTTTATCAATATTGCTTTATTAAAATCAGGGCTTGAAAATTTAAACAATAAAAGATATGATTTAATGAGGTTTGTAAAGAATGAGAAATTATTTCTGGAAAATTATAAATTACAAACCGTGATTAAGGAATATGGAGTAGGAGATAAAGTGCCACATAGAGCATTGGAAGATGCCAAAATGATATATAAACTTGCGATGAAAGTAAATAAATTCAGGGACTTATATAGTCTGGTATAGCCTTTCTACGGGATCTTTTTACT # Right flank : CATTATCCGAATGCAGGACAATATGCTCATATATCTTTTTTTGATAATATATTGAGCATAATATAATATTGATTTATTACATTACTATAATATATTTAATCAATATATTATAAAAGAGTCTATCAGGAACCGGACAGGCTTAAGGTAGGAAGTGTATGTATATAGTCAGAGAAACTATTGGAGAATATTTCTAAGAACCACATTATAGAGATTGTAACTGTTTTGCACTTGAAATATTGAAGTTCAAAAAATCTTAGAATATTAGTAAAATTTGAAAATATAAGTAATAATTATTATTTATAAAAACAATTGTAATAATTATATACCTTGTACAAATATAAAATTATATAAAATTTTAAGTGTATACATATTGAAAATATAATGAAAAATAATTATAATAGGATTAGATAGTTTTAAAACAATTGTGCGTGTTTTAGTTTTATGCATAAACAATAAGCAGTTTGTCATTATATGACATTACTAAGATATTTCAGGGGGTA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : GTGTTCCCCGCGTAAGCGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1652836-1651672 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622296.1 Lachnoanaerobaculum saburreum DSM 3986 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================= ================== 1652835 30 100.0 36 .............................. ATATTGTTTTAGCTCATTAATAAATTCATTTACCGC 1652769 30 100.0 40 .............................. TGGTTGTTAGTGTCAACAAACTTTTCGTTTATTAGAAGTC 1652699 30 100.0 42 .............................. CCCTTGCGGTCGATAATTTTATACCCAATATCATAGGGTAGT 1652627 30 100.0 49 .............................. ATTGTCAAATCTCCTTTACCCGTTACCGATAGCTCAGTTTTTATTATTT 1652548 30 100.0 39 .............................. TCAAATTTATATTCATTCTTTTGCCAGTCGAATTCGCAC 1652479 30 100.0 45 .............................. TACTCCGGTGTGGAAGAATCTGTCAAGATCCTGACCGGCCTGTAA 1652404 30 100.0 40 .............................. TACTAACAATCTATCAATAGATACATCTTTCCATTTAACC 1652334 30 100.0 42 .............................. TATGCCATTCTCTTTCAACCAGTCAGTAAAATCAGCCGATCT 1652262 30 100.0 37 .............................. GTTCATATTCCCTCCTTGGGATCTTCCGCTTTGTGCG 1652195 30 100.0 37 .............................. AGTGCAGATGTTGATAGTGTGCGGTGTAAGGTTAACT 1652128 30 100.0 43 .............................. AATAAACTATCACTTACAATTAAACCTGTAATCCACACTTTTT 1652055 30 100.0 36 .............................. AACCTCTTCACCAACATTGATAATATGTCACTACAA 1651989 30 100.0 39 .............................. AATTTCTGATTGTCATAATTCAATCCTCCCTGAAATATT 1651920 30 96.7 41 ........................T..... GATTTGAGAAACCCACATCCAACATTCCAATCATTCTTTGC 1651849 30 100.0 48 .............................. AGACTACATATAATTTGTACTGTGTTTTCATCCATATTGCTTGTCATC 1651771 30 100.0 40 .............................. TCTGAGAGAGCTCTTGCTACCGCAACACCATAAACTGGGT 1651701 30 83.3 0 .......A.......G.........T.C.T | ========== ====== ====== ====== ============================== ================================================= ================== 17 30 98.8 41 GTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTAATTTTTTATAATGTCCTGATATCTGAATTTTTGAGAGTACTCCTTGATTTAAAATTGCTGTTTTAAACGGATTTTATTCAAAATAGTGCTATATTTTTACTTTAATATCCTTATTTTTATAGCAATGCTTATAATTACTCATTTTATATACTAAATCAAAAAAGTCTGTCACTGATTGTATACAATCACGACACCCTGAAAAGCCCCATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTAGCCTGTAATACAATAGTTTTAGGTCAAAATAGTAGTTTTTACCTATTACAACGGCTTAAATGCAGTT # Right flank : CTAGTTTGATGATAAACAGTAACTATATTCCATATTCAACGTAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 1664036-1663288 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622296.1 Lachnoanaerobaculum saburreum DSM 3986 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =============================================== ================== 1664035 31 100.0 47 ............................... CCAACATCATTACTTTCTACTATACCCTTTATAGATGAGCGCTCACC 1663957 31 100.0 40 ............................... TCAGTCTCAACTAATAACTGTCGTATTCTAAACAGTAAAT 1663886 31 96.8 39 C.............................. TTTTCCTTCTTCAGTATCTCGAAGATCTGCAGATTGCTC 1663816 31 100.0 37 ............................... TAACCTACCCAACCCATTGGCAGTCCATCAACATCTT 1663748 31 100.0 40 ............................... TAAACTTTTTGACTGCAAAATTAACCGTAGTATTAACATT 1663677 31 100.0 42 ............................... GATCACCAATAGGAATGTAAAAGCTACTGCCTTTGCTTTCTG 1663604 31 100.0 41 ............................... TCTTCCATTGTAACGGGTTCGCCATCTTTTTCGCACTCTTT 1663532 31 96.8 35 A.............................. TCTTCGCCATTTTCTTTGTTCTTCTCCTTTATCTT 1663466 31 100.0 44 ............................... ATATCATATATTCTAACTTCTACTACGTTAGATAACCAGTCGGA 1663391 31 100.0 42 ............................... TGTAGGAATGTACATATCCTTACCTTTTTTTACTGCATTAAC 1663318 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =============================================== ================== 11 31 99.4 41 TGTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCAATTTTTTATAATATTCTAATATCTGAATTTTTGAGAGTACTCCTAGATTTAAAATTGCTGTTTTAAACAGATTTTATTCAAAACAGTGCTATATTTTTACTTTAATATCCTTGTTTTTATAGCAATACTTATAATTACTCGTTTTATATAATAAATCAAAAAAGTCCGTCGCTGATTGTATACAATCATGACACCCTGAAAAGCCATATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTTGCCTGTAATACAATGGTGTTGGATCGAAACAAGAGTTTTTACCTATCACAACGGCTTAAATGCAGT # Right flank : ACTGCATTTTTCATGAAAAAATCCTCCTTTCATGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTCGTTTATTCCCCTAATGTCTATTCCAAATCCTTTCTCATAGTTATTTTTTATACTCTTACTTTTCAAATCATTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 4 1666512-1666272 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622296.1 Lachnoanaerobaculum saburreum DSM 3986 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================ ================== 1666511 31 100.0 33 ............................... AAATCACCGATTCTCTGGTATGATACAACACGA 1666447 31 100.0 35 ............................... AAATCCATCCACCCATATCGGGATCGAAGTATTGC 1666381 31 100.0 48 ............................... GAGATAACTTGAAACTCTTTTTCGGTTAGGCAACTCCTGATTGCAGCT 1666302 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ================================================ ================== 4 31 100.0 39 TGTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : TCATTACCAATAATTGAACTTTATAATATTACGTTCTTTGTTATATAGCCAATAATATAACAGTTCAGTTACTATCTTAATTGGTAAACCATTAAGTATATCTAAATATTATAATAAGTTTTTTATAATAAAATGTCAGCTGTCATCTCATTTATATACAATGTATCTTATTATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTGATTTAAAATTGCTGTTTTAAACGGATTTTATTCAAAACAGTACTATATTTTTATTTTAATATCCTTATTTTTATAGCGATACTTATAATTACTCGTTTTATATGCTAAATCAAAAAAGTCTGTCGCTGATTGTATACAATCACGACACCCTAAAAAGCCCCATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTTGCCTGTAATACAATGGTCTTGAGTCGAAACAAGAGTTTTTGCCTACCACAACGGCTTAAATACAGT # Right flank : TATCAAAGAACCACTCGTTCTCCCTTGCCTCGTCGCCGTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 5 1681998-1681122 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622296.1 Lachnoanaerobaculum saburreum DSM 3986 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================= ================== 1681997 30 100.0 36 .............................. GAATAAGCTGCATAGCAGTGATTCCAATCTGATTTA 1681931 30 100.0 35 .............................. AATTCAAGTAGACAAAGCCTGCTGGATAGTACTTG 1681866 30 100.0 35 .............................. CATACGTCCCTCCTTATTAACGTACAAACTTTTCC 1681801 30 100.0 49 .............................. TTTTTTGCCCTTTGCTCAATCAAATCAATTTTAAAAGTTTTTCCATTAA 1681722 30 100.0 40 .............................. CTCTTGCGATTCCCTCAGATTCGTATTCTCTAATAACTGT 1681652 30 100.0 40 .............................. GTGCTTATAATTAAGCTTGGCTTTGATATTTTCAAAATAT 1681582 30 100.0 41 .............................. CTTTTACGAGCTGCACCCTCGTGCTGTCGGCTACCAACCGA 1681511 30 100.0 44 .............................. AAATCCCTCCACCAAGTAATCCATAATACTATTCCAGCTATAGA 1681437 30 100.0 43 .............................. TTCGGTTCAGGTCTATTGCTTGGGATCTCCGGCCTTTTGTCGG 1681364 30 100.0 48 .............................. TATTAGCTGGTGATACAAATCTATCATTCTTATGCTTATCGAGTTCTC 1681286 30 96.7 35 ........................T..... AATTGCTCTTCTATATCTTTTCTTCTAGCCTCTGC 1681221 30 96.7 40 ........................T..... GATTATACATATCAGATTCTTTGTTTTGAAGCTCCCGAAT 1681151 30 93.3 0 ...................A.....A.... | ========== ====== ====== ====== ============================== ================================================= ================== 13 30 99.0 41 GTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : TCGGCTTGTCTGCTATGATGAAAAATACAAGCCATTTAAGTACAACTAGCAGGGGCATTGATTTTCTCCTATTTTTTATGTACGAATCATTATAGAATAAAAAGTCTGTCGCCCTCTATTTTTGCTTTTAAATATGTAATTACATATTCATACTATAGTATGTGTTTGTAATTACATTATTTGATTAATTTTTATCATATCTTGATATATAAGTTCTTGTTAAGTGTTTTTAATATAAGTTTACTGTTTTAAACGGATTTTATTCGAAATAGTGCTATATTTTTGCTTTAATATACTTATTTTTAAAACAATACTTACAATTACTCTTTTCATGCAATAAAGAAAAAAAGTCTGTCACTGATTGTATACAATCACGACACCCTGAAAAGTCCCATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTAGCCTGTAATACAATAGTTTTAGGTCAAAACAAGAGTTTTTACCTATCACAACGGCTTAAATGCAGTT # Right flank : CAACCGGTATTTTGATATATCTGTTGGTTCTATTTTGCCTTTAAACAACAAAAAAGACAGTAGTACCATTTCGATACTACTGCCTTTTTATATTGTCTATATTTTATTTTCTTTTCTGATACTGTCTACTTCTTCGTTTATTCCCCTAATGTCTATTCCCAATCCTTTCTCACATTTATTTTCTATATCCTTACTTTTCAAATCATTTATATCATTTTCAGAAGAGAAATATCTCTGATTTGATAAATGTACTGAAAAAGGTATGCCTTTTTGTGCAACCATTTGTTTTAGACACATTCTGAGAACTGTTGATAAATCAATTCCCAGCTGATTACAAATATCTTCAGCATCAATTTTTAAATCCCTGTCAATCCTAAACTGTATTAAATCCTGCTTATTCAAAATACCTCTCTTTCTATTTTTTTAACTTCTTCAAATCTGAAATATAGTCTATTATAAGTTTTTTTAGATTTGTCAGACTAACTCTATAATCAGGGTTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 6 1685707-1684687 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622296.1 Lachnoanaerobaculum saburreum DSM 3986 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================ ================== 1685706 30 100.0 33 .............................. TGGTCGACCGTCACATTCTGATGAGACTGATCC 1685643 30 100.0 47 .............................. GAAACCCATCCACCCATACCTTCATCAAAATATTGGTCAGTTTCTCC 1685566 30 100.0 45 .............................. AAATCCAAGTCTTGTTGGTAAATATGCAAAATAACTACTGAGAGC 1685491 30 100.0 39 .............................. GTTACCTGCCTCCGCAAACATTCCATCAGCCAGTGCGAA 1685422 30 100.0 44 .............................. GAGCCTGCTCGGTCTGATCTCCTTGCTCTTGAGAGGAAGTGTTT 1685348 30 100.0 47 .............................. ATCATGTATTTTTTTGAACCAAGATTACTAAAACCATTGTTTGGAGG 1685271 30 100.0 37 .............................. CTATGTACTCTATGGGAGGTGGTATCAACAGAGCATC 1685204 30 100.0 48 .............................. CTGCCATCACAATACACAATTGCTTTATCACTGTCAGTCTTTATTACA 1685126 30 100.0 42 .............................. TAATGAATTAAGCTGTACATTATTGATTGCATTTTCTGATTC 1685054 30 100.0 45 .............................. GGTATAACGAATTTAACTGTGTACTTGAGTCCGGCGAGTGGTTTT 1684979 30 100.0 35 .............................. TCCGTTGTTCACGGGATCGCCCTTGCGAGAACAAG 1684914 30 100.0 34 .............................. CCACTTCCACGGCGACATTATCGTCCCGCTTCAG 1684850 30 100.0 38 .............................. TTTTCCAAGTCCAGACGCCCCAGCGAAGATCCAGGCCT 1684782 30 100.0 34 .............................. TAGTATAGCAAATGGTATATGGCTATGATGAGTT 1684718 30 90.0 0 ......................G.AC.... | C,T [1684690,1684692] ========== ====== ====== ====== ============================== ================================================ ================== 15 30 99.3 41 GTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : ATTTTCATTTATGTCGCTTGGGAAGCCTATAGAAATATAAAATGTATGAACTTCATATACTCATGCCATTTATATATATTTAGTGAAAAAGTCTGTCAATCTCTACTTTTACTTTACGGATATGTATTACAAACACATATTATGGTATGGGTTATGCATGTATATTGCATGTTCTTCTTTATCTTATTTTTTATAATAATATGATACAAAACCTCTGTAGAGCTATTTCGGATGTAGATTTAATATTTTAAGCATATTTTACTTCAAAAAAGTATATTATATAATTTTAAATACTGCATTTATTATACAATATTTACAAAGAGCACTTTTGCTCATTAAGATCAAAAAGTCTGTCACTGATTGTATACAATCAGTGACAGACTTAAAAGCACCATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTCACCTGTACTACAATAAATTTAGCACAAAGCGAGGGCTTTCCCATATTACAACGGCTTAAATGCAGTT # Right flank : CTATATTCACCAGGTTGGAATACTAAAATCAAAATACAAGGAGGAAGAGATGTTCGTCATTATCACATATGATGTTAAGGCTAAGCGAGATCCCAAGGTGATGAAAACCATCCGAAAATACCTTACACATGAGCAACGTTCAGTGTTCGAAGGGCTTATTACACCAGGACGATTAAAACACCTAAAAGAAGAACTAAAAAGAATCGTGAACGTTTCCGAGGACTGCATTAATATCTATTCTCTGGAAACACTTCGATATTCCAAAAAAGAAAGCATTGGAAAACAGGTGTACCATGGGAACATCATCTGAGATATCTTATGAAAAAGCTTACGATGGAAGATATTTTTATTTCCGAACAGATTGAAGAGGCTCTAGACCATCTTTCCACAAAGAAAGATACTTGTGGAATAGACGGGCTCTATCTTTCTGAATTAAGAGATGATTGGAATATTAATGGAGAGCGATATCTTTCTTTACTGCGAAAAGGAAAGTACAAACC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //