Array 1 42131-39238 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASJR010000014.1 Lysinibacillus sp. K60 scaf_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================== ================== 42130 29 100.0 36 ............................. GTTAGCTTAACTCCTACACATTATTTGATGATACGG 42065 29 100.0 36 ............................. CAAATCATTTAGCATCTTTAAACATGTGCTGTTTAC 42000 29 100.0 36 ............................. TTTTTCGTCTCTCTGAAATTTTGGCAGCACACACTG 41935 29 100.0 34 ............................. AAAGGTATTTCTTATACAGGAACAGTTGCCGGCG 41872 29 100.0 35 ............................. TAAAGAGTTGCAAGAACTGTATGACTACGCAAAAG 41808 29 100.0 36 ............................. ACGCAACAACCGCCAAAGAACGGATAGCGGCACAAA 41743 29 100.0 35 ............................. TTGAAATGCACGATGATTTTGGTAGTTTCATAGCA 41679 29 100.0 37 ............................. TATCAGAAGTGACTGGTATTGCTGCTGAAAAGATAGA 41613 29 100.0 36 ............................. GTAGTAAACGTAACACGTATAGGAGAAAGACCAACC 41548 29 100.0 34 ............................. TAATGAACGCTCTCCACAGTTGGTCATTCAACGA 41485 29 100.0 36 ............................. TTTTTATGGATAGATAAAGAAACAAATAAGGTAAGT 41420 29 100.0 35 ............................. AAATGAGTAGCGCTTACTGAACAATATAGAACGAT 41356 29 100.0 36 ............................. GACAGATTATACGCACAGCTTAGAGCGTGATAATTC 41291 29 100.0 37 ............................. TCTATTTTGATAATTTTGTAATCTTGATAGCTCTGCC 41225 29 100.0 35 ............................. ATTGAACGGGATTTCACGAATTACAATCAAATGCG 41161 29 100.0 35 ............................. ATGTGAACAGGATATTAAAAAGGCAGAGGTTGAAC 41097 29 100.0 36 ............................. ATTGATAATCTTGGCGTTTGTGTTGTAAGATTCTGC 41032 29 100.0 35 ............................. ATGAATATAACCATTGGAACATAGAGGAAAATACG 40968 29 100.0 35 ............................. AGCTTTGGCTGTTTCGTTCATCTTTCTCACCTTCA 40904 29 100.0 35 ............................. ATCAGGGTTAAGGATAGGAACGTAGTTTTGACGAG 40840 29 100.0 36 ............................. GCACAATATCTTTCTATTAATCCCAAGCACCATTAC 40775 29 100.0 36 ............................. GGTGTAAAAAGTGGTCCTACCCTCAAAGTCAATAAA 40710 29 100.0 35 ............................. CAAAATAGCGCTAAGAGTACGAATAGCCGACAAAA 40646 29 100.0 35 ............................. CATGAATATTTTGGAGTCTATAAATATACCAAACA 40582 29 100.0 37 ............................. GATGATTCATATACGTCTGAATCCACTGAGGTATTAC 40516 29 100.0 37 ............................. ATTACCAATGCAATCGATACGACAGTCGGCAAGGTAA 40450 29 100.0 37 ............................. AAACATTAATGCTGTTGATTTATCCTCTAACTTTTTC 40384 29 100.0 37 ............................. AAACATTAATGCTGTTGATTTATCCTCTAACTTTTTC 40318 29 100.0 35 ............................. GTTGCAGGTAGATTAATGCTTAAATTTGCTAATGG 40254 29 100.0 36 ............................. ATAGATGTGGTGTTTAACATCCCTAGACCTCCTAAG 40189 29 100.0 36 ............................. AGCTCCACTTTTATCAGTAGACGCTGTTGTGCCAAG 40124 29 100.0 37 ............................. TTGTTTTATCGAGAGCTATAAACAGAGCTGCCCAGGC 40058 29 100.0 38 ............................. AAGAATGATTAATGAATATAACAAACAAATGCAGAAAT 39991 29 100.0 38 ............................. AAGAATGATTAATGAATATAACAAACAAATGCAGAAAT 39924 29 100.0 35 ............................. TTCTACGTTTCTGTCCGTTAAGTAACGCTATTGAC 39860 29 100.0 36 ............................. AACGAAGCGTGTTACTTATTTGCCTGCGTGCTTAAC 39795 29 100.0 36 ............................. GATTATGCGAAAGTAACGACTCGTTGCTCGCTTTTT 39730 29 100.0 35 ............................. TTCTTATCGACGCAGGCATTGCTAAAACGAAAATA 39666 29 100.0 36 ............................. ATAGCATGTTGCATAGTAACCGACAGAATCAACAAC 39601 29 100.0 36 ............................. GGTGAAGATTTTCGATGTCGTTGTATAGCACTGCCA 39536 29 100.0 36 ............................. AAAGCACCTAACAATCGTCCAACGTTGCGCAAACGT 39471 29 100.0 37 ............................. ATTTCACCACGTTGAAATTGAGCCTCCACCTGTGACT 39405 29 100.0 35 ............................. GGAGCATTTACTCAACCATCTGGCAATCTCGAAAT 39341 29 96.6 46 ...........................G. TGCTGAGGATTCGTCATTCTCAGCAACTTCAATAAATACCGTCATT 39266 29 96.6 0 ...................T......... | ========== ====== ====== ====== ============================= ============================================== ================== 45 29 99.8 36 GTTTTACATTAACTAAGTGGAATATAAAT # Left flank : GCGTATGATGTGGATGTGAAACGGTGGGAAAAGTCCATAAAGTATTGAAAAAATATTTAACGTGGACACAAAATTCTTTATTTGAAGGAGAAATTACTGAAGGACTTTTAAAACAATGCCTAGCTGAATTAGCAACAAAGGCTAATCCGAATATTGATTCAATTTATGTTTACCGAATTGCCAATCCCGAAAATATGAAAAAAACTGTGTATGGGGTCGAGAAAGATTTTGAAAGCATGTTTTTATAGTCATCTATTCTATTAGTAAAGACTAGAAAAGTGAGTATCGATTGTATTCAAACTCTCTTTTAGTAGAATTGCAGTGAATCATTTTACAACATAATATTCCTTCCAGGCATATCATACCTAGCTTTGAGGGCACTTTGATTGTAAAGGCAAATTTCTGGACTACCGATTGACTGCAAATAATCATATTTGTCGTAAATTACAAGCCGTCAAAGCGTTGAAAAATAAGGGTTTTTTGATTATGCTTAAGGTGGG # Right flank : AGACTCTAAAACCCCGATACCAACCCAAAAAACGAACAGCAGACCCTTAACCGCTGTTCATATTTAAGCCTAAAACCACCCCACTTTCATTAAACCGTCAAACATTCCAAATAAACGCCTGCATATTCCAGCAATTTTACACAAAATTGAATAAGCACAAGCATGTTCGGTATATAAATAGGGTATGAACATTTTTTGGTTAGGAGTGTGTAAATGGCTGTACTTGTGGTGAAGAGGAGTATTATGCATCGTTATCAAAGTATCGGGCAGGCGATTGAAGAGGCGGCGCCTGGGGATATGATTGAAATTCGGGATGGGATTTATGAGGAAAGCTTGGATATTGCCAAGCGGCTGACGTTGTATGGGGTTGGCAATGTGACCATCAAGGGTGGCGTATTTATTCGTTATCAAACACCTGTCGCGATGCGTAATTTACGGTTCCGGCAAGGGCAGGGGCTGTATGTGAAAGGCGATTTACAGCTTGAGAATTGTGTGATTGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACATTAACTAAGTGGAATATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 51303-52629 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASJR010000014.1 Lysinibacillus sp. K60 scaf_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ============================================= ================== 51303 27 96.3 38 ...................A....... ATTCACAAGCTGCTGAACTATCAGAACAGTCACTTGGG 51368 27 96.3 36 ...................A....... ATGATGTAATGGACTTTTTTGGTAACACACTTTCTG 51431 27 96.3 38 ...................A....... TCGCCATCACCATCATCACCAGAACCCACAACTTCAGG 51496 27 96.3 39 ...................A....... CTTAAATATCAACTTTTATATAGGCTAAAATCTTCTTGG 51562 27 96.3 39 ...................A....... ATAACAACGGCCACTGTCTTAAATTGATCTGTTTCTTGG 51628 27 96.3 37 ...................A....... ATTTTACGAAAATATTTCGATAACTCGCTACAAACTG 51692 27 100.0 38 ........................... TGCATGCTCGTGATGCCATTCATGGTGCGCAAGGTGGG 51757 27 96.3 37 ...................A....... TTATCATCTGTATAGCCACTATAAGCAAAAAGTTCGG 51821 27 100.0 37 ........................... CATTGTGGTATAGGCTGGGTTCAAGCAAGTTCAGAGG 51885 27 100.0 39 ........................... AAATCATCGTGCATTTCAAAAGATACAGCTGGCTCATGG 51951 27 100.0 38 ........................... TACTCAGCAAAAAAATCTATTTTATATAAAGAATTAGG 52016 27 100.0 39 ........................... TTTTGGGGTCCTGCTGTTGACGCTGGAAGGGATTATTGG 52082 27 100.0 37 ........................... GTATGTTGTCATAACGCATACTGAAACAGATAATCGT 52146 27 100.0 37 ........................... GTATGTTGTCATAACGCATACTGAAACAGATAATCGT 52210 27 100.0 37 ........................... GTAGTAATGGCGCAACAAGTGGCTCAAACTCCTACGT 52274 27 100.0 38 ........................... GCAGTATTAGAGGTCATTAGCAGTTCGATTGCACCTGT 52339 27 81.5 38 ................TTCA.A..... AGTAAGTTTTCACTGGCTCCCAGCCATTCACTTCACGT 52404 27 96.3 37 ....T...................... CCGACTAGTCGATCACGTCCAATTGCCGTACCAGCTG 52468 27 92.6 37 ....T..............A....... TTTGTGAAGAGATCGACAGCTGATAAAGATATTTCGT 52532 27 92.6 45 ......................AT... AAGTAAATAGGTTAGGAAGATATTGTTCAACTGAAGGCATTTTTA 52604 26 77.8 0 ....T....G.-......CA......C | ========== ====== ====== ====== =========================== ============================================= ================== 21 27 95.9 38 TTTTCATTAACTAAGTGGATTTTAAAT # Left flank : TTTTTTATTAACTATGTGGAAATTTACTTACTTCAAGTTCTTACTTTCTTAAAAAAAACTACAAAAGAGCCTACTTGAGACTATTTCGAGTAGGTTTTTTACATAGCTGATTACTTTTAGTAATTCTAACTAAACTTCATTTAATTTCCTTTACCCTCTTCACTATACGCCGATTACACATGATGAGGATGTAACACAAGTAAGGCAAATTTATAAAGCATGAAAATATTTAACATAGATACAAAACTCCCTATGAGAATGTGCTCGACATGAACTATTACTTGAATGAAATGGATTTTCCCCTCTTTATAAAAATTGCAGTGAATCATTTTACAACATTAAATCCCTTCAATGCTTTCCATGCCAAGCATTGAGGCACTTGAATAACAAAGGGAAATTTTCAAACTACAGATTGACTGCAAAAAAATGATATTAGTCTCAAAGTACAACCTGATAAAGCGTTGAAAAATAAGGTTTTTTTGATTATGCTTAAGGTGGGG # Right flank : CCCTTGCAATCTATTATTCCCTAAAAAAACCAACAACAACCGAATCCCCTCGATCATTGCTGGTTCTTTTCATTTACATTATTTCTTGCGTTTCACAAATACAATAACAAAAATAGCGGCTAAGGCTGCTAGGATGGCGATCATCCATACTGTGTTTGAGTTGGATGTTGTGTCATCTGCTGCGGCTGCTTGTTGCTCTTCTCTTGGTGTAGCGTTCGAAGACTCCATTTCTTTGGCATCCTCTTTCACCACTTGTGCAGTGCTAATTTGTACATATTGTAGTGTTGCTTCATTCGAGGCGGATGTTTCATGCTCGTGGCTATCGCCATGGCCTTCTGCATGATCCCCGTGGCTTTCCTCTTGCCCACCGTCATGACCATGATGGTGATCCGCTGCTGTTGTAAAAATAGAACGTTCTAGCTGTTGCCCTACCCAGCTTTTGGCATCTGTTGAATCGGCAAAGATGCGAGGGTGTCCTGACAGCATGTATGTTTTACCGT # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCATTAACTAAGTGGATTTTAAAT # Alternate repeat : TTTTCATTAACTAAGTGGAATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.48%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //