Array 1 46362-47262 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHLHJ010000002.1 Streptococcus equi subsp. zooepidemicus strain SEZ_14-128 tig00000005, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	================================	======================================	==================
     46362	    32	 100.0	    34	................................	TGGCCGGACAGTCCTGGTCATACTATAAAAAAAC    	
     46428	    32	 100.0	    38	................................	AGCTCTAGTTTATTATTGATCTTAAACATAGTTTTAAA	
     46498	    32	 100.0	    34	................................	AGCTAAAAATGACAACACAAACTCAATCACGGTG    	
     46564	    32	 100.0	    34	................................	TAAGCCATCTACAATATTTGTCAATATCGACTCA    	
     46630	    32	 100.0	    35	................................	TAAAAATGTCGAAGATGTTGTCAATCTCTCCAGTC   	
     46697	    32	 100.0	    33	................................	CGATAATCCATTACCACCAAACTCAAACAGAGC     	
     46762	    32	  90.6	    34	.........CA.A...................	GTGGGGTACTTGAATGAGCAATCTAGTATTATCG    	
     46828	    32	  90.6	    35	.........CA.A...................	GGAGACGGTGGAAAAACGGCTTGCGTTGTAGGGAT   	
     46895	    32	  90.6	    37	.........CA.A...................	TTGATGAAACAGGTGGAGAATTACTTCGAGGATGGGG 	
     46964	    32	  90.6	    34	.........CA.A...................	AAAAGATCAAATACATTCAATCAATGGTGGTCTC    	
     47030	    32	  90.6	    35	.........CA.A...................	TGATGAAGCTGCTACAAAGCGTAAGGAGGAGTTAG   	
     47097	    32	 100.0	    35	................................	TTTGGCATGCCTCACATCAGACTCATGTCTAGCAT   	
     47164	    32	 100.0	    35	................................	CCGACACTGCGAACTAATCATTTGTGACTCCTTTC   	
     47231	    32	 100.0	     0	................................	|                                     	
==========	======	======	======	================================	======================================	==================
        14	    32	  96.6	    35	GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT	                                      	       

# Left flank :   CAGGTGACAGCACAGGTGCCTATTCAAAATGCGATTACCAGTCCAATTGGTTATATTGGAGCACGTAAGGTCGTGATTGAGCAGGTCCAGCAGCTGATGATGCAGATTGCTACCTTCCAGAGCTATCATGATGTGCAGTTTATTCCTATTTTCCGAGAAGAAGAGCTGCCATTGTGGAATTGGAGCCGGTGGCTGCCTCATACTAAACTAAAGGCGCTAAATAGTCGTGGCTTTGTTTATAGCCAGCGAACACGTGACCAATTGTTGACCTCGCTTTATCAGCTGATCAAGGAGCGGCAATTAGATAGTGAGCAGGATAAGGGGACAGAAAAGCAATACACTCCGCATTATATCGTGCTGATTACTGACATGAGCCTCATGCTTGACCACAATATCATGGAATACATCAATGAGGATTTGTCTCATCTAGGCATTCATTATATTTTTGTTGAAGAGGTCATTGAAAGTTGAGGAGCTTAAGCATGTCTGAGCAGGTGGTT
# Right flank :  TTTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGCCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAG

# Questionable array : NO	 Score: 9.09
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT
# Alternate repeat :   GTCTCGCCCCATACGGGCGAGTGGATTGAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-7.10,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.74   Confidence: HIGH] 

# Array family : NA
//