Array 1 81136-79073 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMGN01000010.1 Niveispirillum cyanobacteriorum strain CGMCC 1.12958 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 81135 31 100.0 34 ............................... CATGGTCATTGTCCTATCGTTACGTTGATATTGG 81070 31 100.0 34 ............................... AGTTCAGTCTCGCGGCGTGGATGGACACGCGAAG 81005 31 100.0 34 ............................... CGCAGCCCCCACTGCTTTGTGCGTTGCCTGCAAA 80940 31 100.0 34 ............................... CATGGCGGTGGCGCCGTCCATCCCTATGACAGCG 80875 31 100.0 35 ............................... AATCTGATCCATTTCGACACGATGCGCAATCATGT 80809 31 100.0 33 ............................... CGCCCCTGTAAAGCTGCCGGGATATACGGTAGG 80745 31 100.0 34 ............................... TGTCGCGCCAAGGCATCGCGGAATGCGGTTTGCA 80680 31 100.0 33 ............................... AGCGTGATCGAGGGGCTGCGCAGTCTGGACACG 80616 31 100.0 36 ............................... GTCCGAAGCGTAACCCAGGACAAGGCTGACCGCCAA 80549 31 100.0 34 ............................... ATTGAAATCTGGAACTACGGCAACCCTATCGAAA 80484 31 100.0 34 ............................... ACGGTGGACGCTGGCCGCGTGCCGCCGAACTACA 80419 31 100.0 35 ............................... ACGCAGACGCTGGTAGCAGCAGCTACCTTGGGCAA 80353 31 100.0 34 ............................... AGGGCCAGACCGGCGGAAGATGATGCCTGCACCG 80288 31 100.0 33 ............................... GCTCGCTTCACGTGTGCCCGCCGGCCTGGGCTG 80224 31 100.0 35 ............................... GTCGCGCTGTGCTGCCTAGCGCTGGGTGTCGGCAT 80158 31 100.0 35 ............................... TATGCGCGGGTGGAGGAGGTCACCTCGCCCATTCC 80092 31 100.0 34 ............................... ATCGTTGCGCGCCGATCAACTGCAAGAGGCTATC 80027 31 100.0 37 ............................... AGCGGCGGCTGCCGTCCAGCGGTCAACGTTATCACGA 79959 31 96.8 35 .............A................. TGGTAAGTCCGCGGGGCAATCGGTGACAGGATGGC 79893 31 100.0 37 ............................... CTTGAACTTGGCCCGGAACTGCCGGATCTGGGCGAAG 79825 31 100.0 35 ............................... CCACGCGAGCACCAGGCTCCGCCCGACCCGTGAAA 79759 31 100.0 34 ............................... GTCGTCTAATGGATCTGGCCTTGCCCGGCCAGAC 79694 31 100.0 35 ............................... GTGGCGTCAATGCCGCTGGACAACGTCAAGAACGA 79628 31 100.0 37 ............................... GGCCACGCCAGGCTACCCATCTGGTGACGGTGGTGGT 79560 31 100.0 35 ............................... GTCAATGCCGCCGGTAACCTGCGGCCCGCGCTGAT 79494 31 100.0 34 ............................... GCTGACCGGTTGCCCGTCTTATCCTCTATCGATG 79429 31 100.0 35 ............................... ATATTGAAAAGGGCCTCTAACCCCTTAACGACCGG 79363 31 100.0 34 ............................... AGATCGGAGCAGGCGGCGCGGGATGCTGGTTGCA 79298 31 100.0 34 ............................... AGGCCAGAAACGCCCAGGTTGAAGAACCGCCGCG 79233 31 100.0 35 ............................... GATTTCTGCCTTGGCCTGCGCCAGCGTCACGGCAG 79167 31 96.8 33 ................A.............. CAGTGCTGGGAAAGCCAATTGCCACCCGATAGG 79103 31 93.5 0 ..........G.........C.......... | ========== ====== ====== ====== =============================== ===================================== ================== 32 31 99.6 35 GTCGCCCCTTCACGGGGGCGTGGATTGAAAC # Left flank : ATAGGATTTCCTCATCATGTTGATGCTGATTACTTATGATGTGCGAACGGAAGACACGGCAGGCCGACGCCGCCTGCGTCGCGTCGCGCGCGCCTGCCAGGATTTTGGCCAGCGGGTACAGTTTTCTGTCTTCGAATGCGAGGTCGAACCGGCGCAGTGGGTGGCCCTGCGGGCAAGGCTGGTGGGAGAAATTGATCCGACAGTGGACAGCCTGCGCTTCTATCACCTGGGCGCCAACGCCGCCCGCCGCATCGAACATGTCGGTGCCAAACCGGCCCAGGATTTCGATGCCCCGCTTATCTTCTGATCCCGGGTGTTTCCCCCGCGCGAACCCCAAGCTGTCCGATAGATGGCGTACCGTTCGCGCTGGAAAAGTCACCTCAATAACAATATCTTAACTTCCGGAAGCAGAAGCGCCGCCGCCGAGGGCAGCGCCAACGCCCCCTGTTCGCGCAAGGCCGCTTCTTGCACCTTCTTGGACAAGTATATATTCAAAGGCC # Right flank : GCCTCCATAAAAAGGCCCGGCACACTTGTTGATTTCCACGCGGAACTGACCCGGGATTTCCATCGAGAAATGACCCGCCATTGAGCTATGCGGCGGGGTTTATGGTTGGGTCAAGGCATGTGGATTTCCCTTTCTTTTGGCGGATGCTGCGGCAGTGCTGGCTTTGAAACGAAAGCTGTCATTTCCGGTTTCGACGATGTGACAGCGATGTGTCAGTCGATCAAGCAAGGCGGTGGTCATTTTGGCATCGCCAAAGACGGTGGCCCATTCGCTGAAGCTGAGGTTGGTGGTTATGATGACGCTGGTCCACTCGTAGAGTTTGCTGAGCAGGTGGAATAGCAGCGCACCGCCAGATGCGCTAAACGGCGGGTATCCGAGTTCGTCCAGAATCACCAGATCCAGGCGTGTCATGGCCTCGGCCAACTGCCCGGCTTTTCCCTTGGTCTTCTCCTGCTCGAGCGCGTTGACGAGTTCGATGGCCGATATGAACCGGGCTTTAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTTCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //