Array 1 636875-644578 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLCU010000001.1 Chryseobacterium sp. C3 NODE_1_length_838122_cov_116.900326, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================================================================================================================================================================== ================== 636875 47 87.2 30 T..C....CG.A.............................G..... CTGACTAAATTAAAAGCTCAATACGATCTC C,C [636877,636881] 636954 47 100.0 30 ............................................... TTCGCTCATTCCTTTTTTATCCGTAGCCCA 637031 47 100.0 30 ............................................... TTTACGGGAAGGCGAGTTTATAGAACTCGA 637108 47 100.0 30 ............................................... TTTTCCACTATACCCCAGTTTTGTACTATA 637185 47 100.0 30 ............................................... GAGGGCTAAATTTAGCCCTGAACGAATTAA 637262 47 100.0 30 ............................................... TAAGGTTAATAAAGGACGGCGCTATTAACG 637339 47 100.0 30 ............................................... CATCATACTTTGACTGAGTTTCGGTAGCAG 637416 47 100.0 31 ............................................... ATTTGCATAATTCTTCACGTCCTGACCAACT 637494 47 100.0 30 ............................................... ATCATCAGAATCAATACCTTCATCAATATC 637571 47 100.0 30 ............................................... CTCAAATGTTACCGCATTAAGATCTGCTGG 637648 47 100.0 30 ............................................... GTCAGCGCAATGGGAGGGTTTTGTGTATTG 637725 47 100.0 30 ............................................... AGGCATTAAATTTACGCAATTTGCAGATTA 637802 47 100.0 30 ............................................... ATCTCCTCTTCAGATATTAGCATATCTGCG 637879 47 100.0 30 ............................................... TCAAATAGAAGGTGGCATGGTTGGCATTTA 637956 47 100.0 30 ............................................... ATCATCAGAATCAATACCTTCATCAATATC 638033 47 100.0 30 ............................................... CTCAAATGTTACCGCATTAAGATCTGCTGG 638110 47 100.0 30 ............................................... GTCAGCGCAATGGGAGGGTTTTGTGTATTG 638187 47 100.0 30 ............................................... AGGCATTAAATTTACGCAATTTGCAGATTA 638264 47 100.0 30 ............................................... AAGATCGCGGTCTGGTTCCCGCCTAAAAAA 638341 47 100.0 30 ............................................... TCATGATCAGATTTTCCGGACGTTTTCCTA 638418 47 100.0 30 ............................................... ATTAAAGGAGTTAACCCCAGTTCATTGTAA 638495 47 100.0 30 ............................................... TAGCTGGACTGGTTGGAATACTTTCATCAT 638572 47 100.0 30 ............................................... CAGGTAAGTGAATTAGATTTGATTCGGCGG 638649 47 100.0 30 ............................................... AATGCGCCCAACCTTAATCAAGAGAGTTGG 638726 47 100.0 30 ............................................... TCAATCAATATCTATAAATAACCTAATTAA 638803 47 100.0 30 ............................................... TACCTCTGGTATTTATGATCCAACCATTCA 638880 47 100.0 30 ............................................... TGCTAAAAAGGGCATTGCATTTACGTCTAA 638957 47 100.0 30 ............................................... ATCGTAATATCTTTTTAATGGTCTTGTTTT 639034 47 100.0 30 ............................................... ATCCGGGACCCATTCTTAAACTGTATATAG 639111 47 100.0 30 ............................................... TGAGTTTATATTTGCAAAGTATAGGAATGG 639188 47 100.0 30 ............................................... GCTGAAATAAAAGTCAGCTTCAGCTTCGTA 639265 47 100.0 30 ............................................... TTCAATACACATTTGAATGATTCGAATGCA 639342 47 100.0 30 ............................................... TATGAAAACTCCTTTTTTAATACGCTTTAA 639419 47 100.0 30 ............................................... TCCCTCGGTCTGCCGTTATAATGTTTTTCG 639496 47 100.0 30 ............................................... TTCCAGATTTTGAATATCAATAGTATCAAA 639573 47 100.0 30 ............................................... ACATAAGTAAGATGCAATTTGTTTTGTTTC 639650 47 100.0 30 ............................................... ATTTAACGCCTTGTCTACTGTGGGGCGAGA 639727 47 100.0 30 ............................................... TTCCATCCTTTAATCATTGATGGAACCGTA 639804 47 100.0 30 ............................................... GGATTGTTATGAACACATTTGAAAAACTAA 639881 47 100.0 30 ............................................... CAGAAATCTTCTGTAAACCTTGCCATGATC 639958 47 100.0 30 ............................................... AGGGCGTTTTGACCTGCAAAACACAACTGA 640035 47 100.0 30 ............................................... AATTCCGAAGAATTGCGGTCTGATTTACTA 640112 47 100.0 30 ............................................... ATATGTTGAAACTTTTAATTGTGATGCTGG 640189 47 100.0 30 ............................................... ATTTCTATTACAAGAGTTGAAAAAGGAAAT 640266 47 100.0 30 ............................................... TGGGGTTCTTTTTAAGCTTTTCCGCCCATG 640343 47 100.0 30 ............................................... GAATTCCGACGGATCTGCCTTTTTGCTTAA 640420 47 100.0 30 ............................................... GTAAAATTGGAATGTTTCCTCCGATTTGAA 640497 47 100.0 30 ............................................... TCTAAATTGTTTAGCCAATTCGCTTCAAAA 640574 47 100.0 30 ............................................... TTGGCTTTATTATTCCCGTTTTTGTTTTCG 640651 47 100.0 30 ............................................... GGACTGGGACGCAATCGAAGACCGTTTGAG 640728 47 100.0 30 ............................................... GTTCTTCTTTGTAGTTCCCGACGGGCTTGT 640805 47 100.0 30 ............................................... GCAAATGCACACAAATACGACTAATATAAA 640882 47 100.0 30 ............................................... TAAAAGGTAAAATAAATTCTGAATATTTTA 640959 47 100.0 30 ............................................... TATTTCCAGCCAGTTACTAACATTTGAGTA 641036 47 100.0 30 ............................................... TAAACCAACACAGGAGCGAATAGCGAAACT 641113 47 100.0 30 ............................................... ATTTTACCTGTGAAATACTTAAAACATCTA 641190 47 100.0 30 ............................................... TTTGCACAAATCAAATTGTGACACAAACGT 641267 47 85.1 18 ...................................T.T..TT..TTT GTACTGGGTAAGCGTTGG Deletion [641332] 641332 47 100.0 30 ............................................... AAAAGTAATTCCTTTCATTGTAAACTTTGA 641409 47 100.0 30 ............................................... CCAGCACCTCAACGGCTATATATTTCTGCA 641486 47 100.0 30 ............................................... TCGTCTATTTCACTGTTGTACTGATCTATA 641563 47 100.0 30 ............................................... GTTGCAACGGCTGGCAATACCTGCGGCAAT 641640 47 100.0 30 ............................................... TTAAAATGAGTGGAGGAAACACACGGTATA 641717 47 100.0 30 ............................................... GCCGTAAACTTACACCAGACGAAGCTACAG 641794 47 100.0 30 ............................................... GTAAAGGACGTAAACCAGTGGAATTTAATA 641871 47 100.0 30 ............................................... TATTTTCGACGGAAACGCACAAATTTTCTA 641948 47 100.0 30 ............................................... GCGATTTAAAAATACTTATCCTAATCCTTT 642025 47 100.0 29 ............................................... AACCGCGTAATTTTCTCCAACGTACGTTA 642101 47 100.0 30 ............................................... ATACCCAACTGATAATGCTTTTCTTCCACA 642178 47 100.0 30 ............................................... ATAAACATCTCCATACTCCGTTATCTCGTA 642255 47 100.0 30 ............................................... AAATTGAGCGTTTACCAATTCATTACGACG 642332 47 100.0 30 ............................................... CCGTAGCAAAGACTACTAAATTTACAGACC 642409 47 100.0 30 ............................................... GATAAGAAAAAACAGCCTTTAGAGGATTTA 642486 47 100.0 30 ............................................... CTATACACTAAATGGACGGAGGAGGAATTT 642563 47 100.0 30 ............................................... AATGCGCCCAACCTTAATCAAGAGGTTGGG 642640 47 100.0 30 ............................................... AAAGCTTCCATTGTTTACATCCGGTATGTA 642717 47 100.0 30 ............................................... AATTATATCAGACGTTACATTAGGTAATGT 642794 47 100.0 30 ............................................... TGACGAAACAAACGCAGCCTCCGCAGCTAA 642871 47 100.0 30 ............................................... CTCAAGGGGACCTGTTATAGTCATATCGGA 642948 47 100.0 30 ............................................... ACCACCAATAGGCTTACCAGCTAATGCTCC 643025 47 100.0 30 ............................................... AACCGCTGATCCGATTGTTGCTATCTCCGC 643102 47 100.0 30 ............................................... TGTTTATCATTGACGCTGTAGTGGTGTCAA 643179 47 100.0 30 ............................................... AACCTTATTAATTTGAAATTAATTGTTATA 643256 47 100.0 30 ............................................... CATTACATTCTGCTGAAAGTCTGACATCGG 643333 47 100.0 30 ............................................... TTACCGTTTTCCTCGTAAATCTGTGGTGTA 643410 47 100.0 30 ............................................... GTACTGTAACTCTTTGGCTGCGTCGTAGTA 643487 47 100.0 30 ............................................... AAATACTCCTCTATACCCTCGCCCGTAATA 643564 47 100.0 30 ............................................... ATAAGTTTGTCGCGCTCCTTTGCCAGTCTG 643641 47 80.9 18 ....................................GCT.CTG.GGT CTTTCCAATGCTGGGACG Deletion [643706] 643706 47 100.0 30 ............................................... ATTTTCAAAAATAAATCTACGTGCCTATTA 643783 47 100.0 30 ............................................... GTTACTCTTGTAAGGGCTTAAACCCATTAT 643860 47 100.0 30 ............................................... GTCTCAGCTACTACTGTGATCTTTAGCCTA 643937 47 100.0 30 ............................................... TAGCATAGGCTGCCAAGTTAATGGGATCAA 644014 47 100.0 30 ............................................... TAGAAGTACCATCAGGATTTGCGTAATTTA 644091 47 100.0 175 ............................................... CTCAAAATCTAATCCATTGGTTTTCAATGGATTTTTTTTATATTTTAAAAATAACAAAATCTCTAAAAGTTAATTATAATCTATCTCTAATTATCTTTTTTGATTTTCTATTTGGGAATTGCTTTGACTCAGCCAAATCGAATCCAACGCTTTTCGTCGAATCCGCCCACGCTTA 644313 46 74.5 174 TCC.GCTGCG.A....-........................G..... CTCAAAAAATAATCCATTGGTTTTCAATGGATTATTTTATATTTTAAAAATAACAAAATCTCTAAAACTTAATTATAATCTATCTCTAATTATCTTTTTTGATTTTCTATTTGGGAGTTGCTTTGACTCAGCCAAATCGAATCCAACGCTTTTCGTCGAATCCGCCTACGATTA 644533 46 72.3 0 TCC.GCTGCG.A....-.......................AG..... | ========== ====== ====== ====== =============================================== =============================================================================================================================================================================== ================== 97 47 99.0 33 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC # Left flank : ATTTGGCACAAACTCAGGGGAATACAAAATCTCAGGTGTTAGCGGACGCACTGGATGAAGCTAATGCTAAATTCTTAGCTACCGACAAGTCTCCTGCAAGAAAAGTAGGACAAATCGATAACAGAGGTTCTCACTTTTATCTGGCAATGTACTGGGCGGAAGCTTTAGCAAACCAGACTGCTGATGCAGAATTAGCGACACAATTCGCTCCGATTGCAGAAGCAATGAAGGAAAACGAAGAAGTAATCAACGCAGAATTAATTGGTGCTCAGGGAAAACCTCAGGATATTGATGGTTACTACAAAACAGATACGTACAAAACGTATGCTGCTATGAGACCAAGTACGGTTTTAAATGAAATCATCGACGGAATTTAATTTCATTTTTGCTTAAAATATTTTTTAGCCATAGCCGACTGTAGTTCGGTTATGGCTAATTTTTTATAGTCTGTAAAATCAGCCTAACTTAATCGAACCCTTTTCGTCGAATCCGCCTACGCC # Right flank : CCTCAAAAAAATAATCTACTGGTCTTCAGTAGATTATTTTTGTTTTCAGGATTTAAAATTCAGAACAATTCGAGCTGTTGGAAGGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATGTCTCCAAACTGTTTATCGGTAATGCACATAATGGCTACTTTTCCGGCTTTTGGAAGCATAAATTTCACTCTTTTGATGTGTACTTCTGCATTTTCCCGGCTCGGACAGTGACGCACGTACATCGAAAACTGGAATAAAGTAAATCCGTCATCAATCAATGCCTTCCGAAAACGGTTTGCATCTTTCATATTCGCTTTCGTTTCGGTCGGGAGGTCATATAATACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTCTTTGTTTATTGTAATGATCGCAGCCCGACCTGAGTGGAGCTCTTTTTGCAGATTTTTATCCTTCGGCTCCGCTCAGGATAAACTACA # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.28, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.90,-3.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [8-34] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //