Array 1 3143242-3144015 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084677.1 Bacillus safensis strain Bcs96 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =========================================================================================================================================================================================================================================== ================== 3143242 32 96.9 34 .......................A........ ATAGATGCCTTCTTCAGCCATATTCATGAAGTCA 3143308 32 100.0 37 ................................ CATGTGTTTATGATCACAGGATTCCTGACGTTTCGGC 3143377 32 93.8 35 ...................T....G....... AAGCTCATGCCACACTTTCCCAGGGCAGCCGCTCC 3143444 32 96.9 40 ...............................C TGTAAGCAGGCTCCAGCCTGCACGAAGTCGGTAGGTCGCA G [3143463] 3143517 32 87.5 35 C.TT..................A......... GTTAAGTTAATACCAAGAATGAGTGTCCTCACTCC 3143584 32 84.4 235 ...........T.......G.A...A.A.... TCTTGTCAGTAGGTAGCTTGAATCATGAGCAATAGTTTTTATTTAAATAGGATTAAGAAAAATTCGGTGCGAATGTGAGGTGGACATAAAATCCCTGGGACATTCGCACCTTTTCATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCTATATAGAAAATTAAGGGTTTTTACTATGATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA 3143851 32 96.9 33 ...................T............ TTGATGTACGCACGTATATAGTCATAGTCAACG 3143916 32 100.0 36 ................................ AAGTGATTTCCTATTTCTCGTGACAATTCGGCTACA 3143984 32 84.4 0 .............C......A..AT..T.... | ========== ====== ====== ====== ================================ =========================================================================================================================================================================================================================================== ================== 9 32 93.4 61 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CAAATGGTCGCACTCTATATGAGTGCGTGGATTGAAATTTTGGACCATAGATGCCATCAGCAGCAAGCCCATGGTCGCACTCTATAATGAGTGCGTGGATTGAAATAATGGCAGTTGTAGGCTGGCTACCGAAGGGTTCAGAGGATGAATGCATGTATTGAAATCTTTGTCAGTAGGTAGCTTGAAAGATATTGAAAATTGCGCTTGATATAGGTGTGAAAAATATGACTTGCTCAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAACAGTGAAAATAGGTATGATTTTCAAGAGCAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGAGAACATAAAATCCATGGGGCATTCGCACCTTTTTATTCGACAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCTTATAGAAAATTGAGAGTTTTAGCTACTATTTCCTAAAAAATGTTATAATTAGGTCAGAAATCGCA # Right flank : TGATTGTGTCTTAAACGGGTATGACATTCTCAGAGATTATGTTCTTACAACATCACTTTAAGATACAAAATCCATCAAAATATACCGTTCATTTGTAAAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAATGAATGATGAAGGAGGAATTGGTTTGGGTGAAACTGAGCGAACCGGTAAAGTGGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAACCATGGAGGGCTGACAGGGGATTCTAGAGAAGTGATGTGGATGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCAATAGCACAAGGTGTCATCATTATTGACTCAGATGGAAATCATTCTAACGAAGTCGATATTGCCGTATTTGATG # Questionable array : NO Score: 6.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3152119-3152541 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084677.1 Bacillus safensis strain Bcs96 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 3152119 32 90.6 33 ...........T.T...C.............. ATTACTCCCCGTCTGAACTCTTAGAGGTCTATA 3152184 32 93.8 33 ...........T.T.................. GATCGCCCAGCGGCATTTATTGCAGCATCAAAA 3152249 32 100.0 33 ................................ ATGATCAAGCGTGATGAAATGATACTTTTTCAA 3152314 32 100.0 33 ................................ ACGAAAAAGTAGCTTGATGAAGGTTTAAACGCC 3152379 32 93.8 34 ...........T..T................. GATAATACGGCCAAACGTCTCCCGTTTTCGTCAA 3152445 32 90.6 33 ..........G..TA................. AAAACGTAGTTCAGCAAAGAGTCGAAGTGTACA 3152510 32 81.2 0 ...........T.T.....T.A...A.A.... | ========== ====== ====== ====== ================================ ================================== ================== 7 32 92.9 33 GTCGCACTCTACAAGAGTGCGTGGATTGAAAT # Left flank : CGATCATTTCCTAAAAAATGTTATAATTAAGGCGGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATCTCCTGCTTCACGTATTGGTTAAACTCAGATAGGTCGTCGCACTCTACATGAGTGCGTGGGTTGAAATCTGAAGCGTCGCTGACTTTTTTGGTCAAAATAGGTCGCACTCTACGTGAGTGGGTGGATTAATAATTGCGAAAACATAACCCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAATAAGTATGATTAACAAGTTTCAATAGATTTCATACCAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCTTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTGAGGGTGAAAACAAAATTCTATATAGAAACTTGTGGGTTTTGACGATCATTTCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : TTCTTGTCAGAAGGTAGCTTGAAAGAAATATTGACAGTTGCAATTGATTTAGGGGTGAAAAACATGACTCTGGATCTGAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAATAACTACCTTTAAGCAATAGTTTTTAATTAAATAGGCTTAAGAAAAACTTGGTGCGAATGTGAGGTGAACATAAAATTCCTGGAACATTCGCACTGTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTCAGGAGTGAAAACAAAATTCTATATAGAAACTTGTGGGTTTTGATGATCATTACCTGAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATGCATCATGTCCTCAACAGACTTCCGCAAAGTCATCGTCGCACTCTACATGAGTGCGTGGATTGAAATTCTCTGTTAATGATAAGGAAGGATTCGAACCGTCGTCGCACTCTATGAGTAAAATTCTTATCA # Questionable array : NO Score: 8.47 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACAAGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.50,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //