Array 1 29592-28803 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYT01000030.1 Arachnia propionica strain OH2822_COT-296 scaffold_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================================================================== ================== 29591 37 100.0 32 ..................................... GTCGTTCCACAGTTGGATAACACACACGGGAG 29522 37 100.0 32 ..................................... ATTTGTGTTCCCACTGTGAGTTCAATATCTCG 29453 37 97.3 31 .C................................... CAGGCCGTCGGGGCGGGTCAGGATCAGGGCA 29385 37 100.0 30 ..................................... TGCCTCAGGCTGTCGGGCGCCAGATCCGCG 29318 37 100.0 32 ..................................... GTCATTCGTCTACTCCTTTCACTTGAGCTTCC 29249 37 100.0 33 ..................................... TTTATTTTCTCGCTTCCATATATGACTTCCCAG 29179 37 97.3 36 .......................A............. AGGTTCCAATCGCCGTTCAGGCGATTGATTCGGATC 29106 37 97.3 230 .......................A............. ATGAGGATCAGGTCGTAGTCATCGGCTACGGTCGTCTGAAACACCCGCGAACCTCTCCCCCGCTGGTCGAGCCGGACCACGAGCGCCAGCGAGCAGTCCGAGTCGAGACCTGGTGAGGTTTACAGCGAATGATTGCGGAGGTCTCGACACGAGGCCACTGGCCTCGGCTCGACCAACGGGAAAGCGGATTGAAACATTCGCCCTGAACCCTTCCCAGTCCCTCCCCTGAA 28839 37 97.3 0 .......................A............. | ========== ====== ====== ====== ===================================== ====================================================================================================================================================================================================================================== ================== 9 37 98.8 57 GTCTGAAACACCCGCGAACCTCAGAGCGGATTGAAAC # Left flank : GGAAGCGACCTTCCTGTCGTCCGCTCAGGTGAACGCGAGATGATCTTCTTCCCGGACGGCTACTTCGGCTTCGACGAGGACAGGACCCCCAGGGACGACAAGATCATCACGCACATCCTTCTGAGGGACTGGTCCTGGGACGCCACTGGAGGGTGCTGACTCAGGGCACTCCCATACGGGGGAAACGACCATTTGGAACCCACAGGGGCAAAGATCCGATGGCAGCCCTCCGGGTCCACCAGCGACTCCCCGGCGCGCAAGACCTTCACCAGGCGTCCAGCCTCGGCTCCACGAACGGGATGTGAGATGACAGTTTTCGCGACACCCCCACGAGAGGGTGGCAACGAGACACCCCGAAACCGCTTCAGGTGTGCATGCTGTCTGACAAGGGCAAACACCCGATTTCGACCCTCTGGACCCCTCCGCGACACGCCCGAGACCGGCCAAGTGTGCAACACCCCCGCAAACCCCCTTGTCAACAGCGCCTCCAGAGGGGTAGG # Right flank : GTGGTGCGCCAGGTCCAGACTCGGTCGCGTTGGGTGCCTGAAACACCCGCGAACCTTTCCCCACTGGTCGAGCCGGACCGCGAGCGACAGCGAGCCGTCCGAGTCGAGACCCGCACAACCCTCCAGGCAGCGCTTCGTGACCGCGGTGGATTCGCCTGCCTTGACCTGGTTTCGCCTGTCCTGGGTGTGGCTCGCCTGCCTTAACGGCGGCTCGCCTGCCCAGTTAGGCAGGCAAAGGCAGGCAAAGTGAAAGAAGGCAGGCGTTTCTGACCCAAGGCAGGCGAATCAGCGCGCTGACGAGACCAGCTGGACGGGGCGCCTGAAGGAAGGGGGTGTGGTCGACACGCTCACCTCGTGGCTCGACCAATGGATTCAGGACGGGCGGCGAGGCAGAGGGCCGGGAGCCCATTCAGCTCCCGGCCCTCGTTGTTGGGGGTCTCAGCCCAGCTTGCGCCTCAGCTCCTGCAGGACGACGTGCTGGCGCCCATTGTCCTTGTCCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACCCGCGAACCTCAGAGCGGATTGAAAC # Alternate repeat : GTCTGAAACACCCGCGAACCTCAAAGCGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 2 34506-33918 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYT01000030.1 Arachnia propionica strain OH2822_COT-296 scaffold_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================= ================== 34505 37 100.0 87 ..................................... GAGCTCAATATAGCAGCCGGAGGGCCTAATGCCTCCTGTCTGAAACACCGAAACCAGTAACGATCTAGGTACGCCATACCTAGGCCG 34381 37 100.0 33 ..................................... CAGTAACGATCTAGGTACGCCATACCTAGGCCG 34311 37 100.0 35 ..................................... TCGTATAGAGGGGTCGTCCATGCACTGAACCCCAG 34239 37 100.0 32 ..................................... GACTTCGTTGCTATATATGTAACGAAGACACT 34170 37 100.0 35 ..................................... ACTCCCATTCAAAGAAATTGTGTACAGGGTCTTCC 34098 37 100.0 38 ..................................... TCACGCCGCGCCGGGTAGGCTGCGGCGACCAGCTGGGA 34023 37 100.0 32 ..................................... CGCCAGAGCTCCACCTCTTCGCGGAATCGGAA 33954 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================================================================= ================== 8 37 100.0 42 GTCTGAAACACCCGCGAACCTCAGAGCGGATTGAAAC # Left flank : CAGAAATGGACGGGACTGGCATGGCGGTGACCCATCTGGCGGCCTACGACGTGACGGAGGATCAACGACGGGCCCAACTGGCGGCCCTGCTCCAGGCCTTCGGCGACCGCATTCAGTACTCAGTGTTCCTGCTCAACACCACCCCCGAGGAACTGGACCTCATCAAGGAGAAGGCAGCAGACATCATCGACGAGGACACCGACTCCCTGTGGATCATCCGCCAGTGCGCAGCCTGCTGGAACGACGTGACCTGCATCGGCCAAGCGGAACCACCCACCAGGATCCTCCACTACGCGGTGATGTGAGATGACAGTTTTGGCGACACCCCCACGAGAGGGTGGCAACGAGACGACCAGAAACCGCTTCAGGTGTGCATGCGGTCTGACAAGGGTAAACACCCGATTTCAGCCCTCCAAACCGCTCCGCGACACGCCCGAGACCGCCCAAGTGTGCATCACCCCCGCAAACCCCCTTGTCAACAGCCCCTCCAGAGGGGTATG # Right flank : ACTGTGGCCGGGGCGCTTAGCTGCGTACTAAGCACCGCCTGTCTGAAACACCCGCGAACCTTCAACCGCTGGTCGAGCCGGACCGCGAGCGTCAGCGAGCCGTCCGTGTCGAGACCTGGCGAGGTTCCCAGCAAACGGTCAAGGAGGTCTCGACACGATGCCTCCGGCCTCGGCTCGACCAGCGGACAAGGTGGTGGTTGAACCGCCACCCTCAACGAGCCGCCCGCGTCGAGACCCAGAGAAGTTCCCAAGGACCGGAGGCGAAGGTCTCGACATGAGATCTCCCACCGCGGCTCGACCAACGGGGACGCCGTGACGTGAGATGCCAGTTTGGCGACGGCTCGCGTGCCCCTTGTCCAACTGTCCCGCCAGAGGGGTGGGGCCAGAAGCCTTCGTTCGAACCACTGAGCCCGCCCGGCGGTTCGAACACCCGAGATTCGTCCTCGTTGTTCAGAAGACATCCGGGGTGGGACACCCACAGCTGGGTGCCCCACCCCGGA # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.64, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACCCGCGAACCTCAGAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA // Array 3 38014-37066 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYT01000030.1 Arachnia propionica strain OH2822_COT-296 scaffold_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================================================ ================== 38013 37 100.0 34 ..................................... TCCAGTCGCCGTTCAGGCGACTGATACGGGCCTT 37942 37 100.0 36 ..................................... CCCCCAGATTCCTAGGCGTGCGCCTCGCTAGGGACG 37869 37 100.0 36 ..................................... TGAGGTCCCAGCAATGGGACCAGATTGCCTGGGCGA 37796 37 100.0 33 ..................................... ATCACCACACCGCCTGGGTGTCCAGCGCGGACC 37726 37 100.0 34 ..................................... AACGGGAAAGACAAGGTGACCCAGGCCTTCCCGT 37655 37 100.0 32 ..................................... GTCATGGTGAAATAGCCGCCGTATTCGGTGTC 37586 37 100.0 37 ..................................... ATGGTCACCGTGGCCAGCGTGCCGCAACAGTCGTCGA 37512 37 100.0 32 ..................................... TGCCTTCTTCCTCCACCATCTTGGCGAAGACC 37443 37 100.0 38 ..................................... AGGTCCGAGAAGAACATGCCCACGAAGATGATCGTGAG 37368 37 100.0 32 ..................................... TGAAGGTTATTCTTGAAATCGGAATCTCTATG 37299 36 81.1 156 ......................CCC....-.C..GC. GGACCGCGAGCGCCAGCGAGCAGTCCGAGTCGAGACCTGGCGAGGTTTACAGCGAATGCTTGCGGAGGTCTCGACACGAGGCCTCCAGCCTCGGCTCGACCAACGGGAAAGCGGATTGAAACGTCCTCAGTTCGATGTCCGGAAGGATAACTTCTG T,CT [37268,37275] 37104 36 81.1 0 ......................CCC....-.C..GC. | T,CT [37073,37080] ========== ====== ====== ====== ===================================== ============================================================================================================================================================ ================== 12 37 96.8 46 GTCTGAAACACCCGCGAACCTCAAAGCGGATTGAAAC # Left flank : CCCCGAGGCGGTGCTGAACAGCATCCGGCGCCGTCTGGCCCAGGTGTGGGGCTGGGAGCCGGACACGTCAGCGATGCGGGAGGCCATCCGGGCCGTCGCCCCCTGCCGGATCGACCTCGCCACCCGCAGCTGGCGGGAGGGCCGCAACGGTCGGGCCCGCGAGGTCGCCCTGGCGGTCGGGGAGATCGAATGGGCCGCATCGGGCCCCGAGGAGACCCGCCGCCTCATCGACCTGCTCCTCCAGGCGGGTGAACTCATCGGCGTGGGGGCCAAGACCACCTGGGGAGCCGGGGCCCTGGAGGTGTCGCGCCCAGGTTTGGCGACACCCCCGGAAGGGGTGGCAACGAGATGACGAAAAATGGCCTCAGGTGTGCATGCGACCTGACAAGGCCAAACACCCGATTTCGACCCTCTGGAGCCGCCCGCGACACGCCCGAGACCGGTCAAGTGTGCAACGGCCTCGCAAACCCCCTTGTCATCAGGCCCCCCAGAGGGGTAGG # Right flank : GGACCGCGAACGCCAGCGAGCCGTCCGAGTCGAGACCCGGCGAGGATTCCGGCCAACGGTTCCAGAGGTCTCGACACGAGGCCTCCGGCCTCGGCTCGACCAGCGGAGGACAGGACCGCACACAGGCCACCATGACCTCACCCCAGGAAAAACAACCGAACATTGAAAACAGCAATGACGACCGTCAAGGAGGATGGATGAGCGCTGATGTTCTTTCTGGCCTTGAACTCCCGCTCTGTCTGCAGTTGCCCGCATTGACCAAGGCCTGGGAGCGGGTGCTGCGGAAGGACGCCCAGGATGGGGATCTCAGCGTCGGGGTGGAGCGGTTCGCCGAGGATGCGGAGACGCATCTTGCAGCTCTGGTCGTCGAGCTCTCGGATGGCTCCTATCAGCCGCGAACCCTGACCCGGGTGGCGATTCCGAAGAAGGGCGGGCAGCGGTTCCTGGACATCCCGCCGGTGAGGGACCGCATCGTGGAGCGGGCCATTCTTGAGCACCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACCCGCGAACCTCAAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,13] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : NA // Array 4 47448-48058 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQYT01000030.1 Arachnia propionica strain OH2822_COT-296 scaffold_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 47448 37 100.0 34 ..................................... GTGAGGACGCCCCACGAGGGGGCGCTGGCGCTGG 47519 37 100.0 35 ..................................... CCGTCTCGGTCATCACTGCACCTCCCGGGCGTCAA 47591 37 100.0 32 ..................................... CAAGTAGACGGCCAGCCACGTTCCCATGGCGG 47660 37 100.0 32 ..................................... GGATACGATGTAAAGGATCCCCTCCTCCTCCG 47729 37 100.0 33 ..................................... TGAAAATCGGTTCCAGATTCTCGAACTGCTCAA 47799 37 100.0 35 ..................................... CCTCCCCGCTTGAGGGGATGCGTAGTTGCATCCCC 47871 37 100.0 38 ..................................... GACCACCAGGACCCGTCCATCCGAGCGCTCATGCTCCG 47946 37 100.0 37 ..................................... CCTGCGAAGCAGAGACCGATAATGAAGCCGGTAGCGA 48020 37 81.1 0 .......................CT..T.G.C..GC. | TC [48042] ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 97.9 35 GTCTGAAACACCCGCGAACCTTCAAGCGGATTGAAAC # Left flank : GGTCGTGGAGAGCACGATCCGGCTCAGCAGCGCCCGTATCGCCCGCGGCCGGACGGAGGAGGGACTGGGGCTTGCGGCACAGGCCCGCCGGGAGGCCGAAACCCTCGGCGATGCCCGACTCCTGTGTCGCGCCCGGCTCCCCCTCATCGTTGCGGCCCTCCACCACCGTGACCGCAACCAGACCCTCGCCCTCCTCGAAGAACTCCTCCGGGCAAGCAGGAGAGCAGGCGACAAGCAGATGCTGACCTGGGCACGACAGCAGCTCCGGGACATCCGCGCCGCGCAGAGGTACGCCAGACGAGCACGCCGCCAAGGTTGGCGACACCCCGGAGCAGGGGTGGCAACGAGATGACGAAAAACAGCCTCAGGTGTGCATGCGGTCTGACAAGGCAAAACGCTCGATTTCGGCCCTCCGGGCCCCTCCGCGACACGCCCGAGACGGGTCAAGTGTGCAACGGCCCCGCAAACCCCCTTGTCACCCGGCCCTCCAGAGGGGTAGG # Right flank : CGGACCGCGGGCGTCAGCGAGCTGTCCGTGTCGAGACCTGGTGGGGGTTTCGGCGGATGGTTGCGGGGGTCTCGACTCGAGGCCTCCGGCCTCGGCTCGACCAGCGGTTAGCGGATTGAAATGGGACGCCGTAGGCCAGCTCGATGCGCTTCACGATGTCTGAAACACCCGCGAGCCTGCTCCCTCTGTTGGTCGGGTTGTCCGTGTCGAGACCTGGTGAGGTTGTCGGTGGATGGTTGCGGGGGTCTCGACTCGAGGCCTTCGGCCTCGGCTCGACCAGCGGGGAGGTGGTGGTCGAGCCGAGTGTTGAGCGTGAGTGAGCCGTCCGTGTCGAGACCTGGTGAGGTTTCCAGCGGATGTTCGTGGAGGTCTCGACTCGAGGCCTCTGCCTCGGCTCGACCGGCGGGGCATGCGGTGCGCGTTTCGGATGACCGGGGTGACTGCTTGTCAGGGCCGAGCTGAGAGGATGAACTGTGGGCAGCAGCGACACATCGAAGGAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACACCCGCGAACCTTCAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //