Array 1 10424-9467 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXKF01000029.1 Streptobacillus moniliformis strain IKB1 contig_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10423 36 100.0 29 .................................... CAAAAAAAGAAATGAATGGACACTAAGAT 10358 36 100.0 30 .................................... AACTAGCCGAAAGAGATATTTTGTTAAAAA 10292 36 100.0 29 .................................... TCTTCCCATTCGTTCCATAAAAGTCTGTA 10227 36 100.0 30 .................................... AACAAAAGTTTAAAAATTTGAATTTGACTG 10161 36 100.0 30 .................................... GTTTTGTACCGTTATAAAACTTTCATTTAA 10095 36 100.0 30 .................................... CAAAAGTAATGGCGACTGTTCAACTTAGAT 10029 36 100.0 30 .................................... TGAAAAAATTTGCTTCTGATTATGGAGCAA 9963 36 100.0 30 .................................... CTTTTATAATAGAGTTTACTTCTTCTAAAT 9897 36 100.0 29 .................................... CTTTATAAAAATTTAATGACACATTATTA 9832 36 100.0 30 .................................... TTAAATTTTGAAAATCCATTTGTTTTGTTA 9766 36 100.0 30 .................................... ATAGTAACGGTAAAGAGGACTTAGAGACTC 9700 36 100.0 30 .................................... TGAAATCGTAGAAATATATTAATCGTTACT 9634 36 100.0 30 .................................... AAATGGTCTGTCTTTAGAATATGCAAGCGA 9568 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9502 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 98.5 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTCATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //