Array 1 1041-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZMV01000002.1 Bifidobacterium moukalabense DSM 27321 DSM27321_C02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1040 33 100.0 34 ................................. ATGCGCAATTTTAGTCAAAATGCATGTTGATGCC 973 33 100.0 34 ................................. ATTGTCACTGACTATTTGACTGGCGTTGTTAAGG 906 33 100.0 34 ................................. GTTTATTATTGAGAATGAATGTCCATAAATGTTC 839 33 100.0 34 ................................. CATCCGAAAACTGCCGGTACGACTGCAAGCACCA 772 33 100.0 35 ................................. CATGATAGTTTCCTTTTTGTCAGCCGTCCGCCGAC 704 33 100.0 35 ................................. CTCCTTGACTGGATTGTTGAGGTTCGCGTATTTGG 636 33 100.0 34 ................................. ATCGACGAATACCACAAGTATCTGAACCAACAGC 569 33 100.0 33 ................................. CGGATCCACGCCATGGTTGAGCAGGTTGGCCAC 503 33 100.0 33 ................................. GAAGGCAAGGCCGAGGACGATGGACTCATCACA 437 33 100.0 33 ................................. ACCGAGGGTATGAACGCTCCATGGGTCACGCAA 371 33 100.0 33 ................................. CAGCATGACATTCAACAGCGAGTTTCCACAGAC 305 33 100.0 34 ................................. TGCGAGCCATTGGCTGCTTGCGTCGATGAGGTCG 238 33 100.0 35 ................................. GATATGATACATACCTTGCGGACGACTCAKAKCGG 170 33 100.0 38 ................................. GCGCGGATCGGTGAAGATATTGAATTCCGCCACGGGAC 99 33 100.0 34 ................................. GGGAATGGTGTCGGCCCGGACAACGTGATAGCCT 32 32 97.0 0 ................................- | ========== ====== ====== ====== ================================= ====================================== ================== 16 33 99.8 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : CTGCGGGAAAGAGACGATTGCGTAACGTTGCGAAGACTTGTATGAAGTACGGGCAGCGAGTGCAGAATAGTGTGTTCGAGTGCTCGGTCACTCCAGCAGATTATCTAACTCTAATAAATGAAGTGATGAAAATCATGGATCAAGAGAAGGATAGCCTACGCTTATATAAATTAGGAACGAAATATTCTGAGAAGATTGAATATTATGGTGTGCAACGGCATCTTCCTGTGGACGATGTAATGATGATCTAGGCACCGAAGTCCGCCGTTGTGCGAAGTGGAAGCTCTCATCGGATAAGGCGAGCTTCGCACTTGGATAGAACTTGGAATCGAAAAGTAAGTCGACTTTCCTTTGCTGTTTGATAATTTCAGAGAGAAGAATCGTTATTATTTTTTGGTCGAGTGATTAGAATAACAGGTTTTGACCTCAAACCCTGCTACTCTTGGACTCGTACGAAGGATAGATGTTCCACAATGTGAAACATGCTGTCCATCTGTGCA # Right flank : A # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6-370 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZMV01000006.1 Bifidobacterium moukalabense DSM 27321 DSM27321_C06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 6 33 100.0 33 ................................. GTAGGCGTGTTTGTGTGGTTTGCAGTAGCGTTG 72 33 100.0 34 ................................. TAATGAGCAATCCCCCGAAACAGAAGGGCACGAA 139 33 100.0 33 ................................. GTATCGGACTGCGGAACGCCGAAAACTTCCTGA 205 33 100.0 33 ................................. GAATGCCAACGCGACGAACTCACCACGAGTGAC 271 33 100.0 34 ................................. CAACACGTATGCGACCAAAACCGATGTCAGCAAG 338 33 81.8 0 ..................T.T.GA...CT.... | ========== ====== ====== ====== ================================= ================================== ================== 6 33 97.0 34 GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Left flank : TGACGG # Right flank : TGACGGGGGCGGTCATGGGATTGCGTGAGCAGCGTGAACGATGCGGGTTGACGTTGTTCCAGTTGGATGCGTTGACCGGTATCGCCTATACGCGGCTGAGTACGTTGGAGTGTAATCCGTCTGAGGCGCGGAACATGTATTTGTGTACGGCTCGGCGGATTGCCGACGTGTTGCATTGCAACGTGTTGGACTTGTATCCGGATGAGGATGCTTGGCGTGGTGGCGTGTCGGCTGGCGTGACCGGGTTGAGGAGGATTCGTAGGGAACGGCATTTGACGCAACGGATGCTGTCGTCTTTGACGGGTATTCCTCAGCCTAATATTTCTTGGTTTGAGACTGGGTATCGTCCCGTGTCTCAGATGTATTTGGATACTGCGCGTCGCCTGTCGGAGGCGTTGCAGTGTGACCCTGTTGATTTTCTAATTGATTGAAAGGATTTTGTGATGAAGGCTGAGGTTGTTATTGTTTCGCGGTTGGCGCGTCATGGCGGGACGATGCTG # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //