Array 1 797-565 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZCE01000074.1 Paenibacillus polymyxa strain ND24 Scaffold_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 796 32 100.0 36 ................................ CGTTATAAATTTCGGCGTATACGCGGTGAGACGGGT 728 32 100.0 34 ................................ CAGTATATAGGAAAGCCGAGGGATACGACAATGG 662 32 100.0 34 ................................ AAGATAGTCTGGAGAGCTGACACCTGTACCTTAA 596 32 84.4 0 .........C..G........C.A...A.... | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 96.1 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TAAGTTCCGTATTCGTGTCAATGTCATTTATCCAGGGGCCATTTCGACGAATATTGATGAAACTACAGAGAAATCGGAAGGGTTAAAGCGGATCACCATCCCTGTGCAATTTCCCGAAGGAGATCAGCCTTTAGCAGATGGACCGGGACAACCCGAGCAGGTTGCTGATTTGGTGACATTTTTGGCGTCTGACCATTCGCGTCACATCACTGGCGCACAAATTGTGATTGACGGGGCAGAGTCATTATTGTTTTAAAAAATAGAGCATTCTCTGGGATAGAGAGAGGTTTTGTGGTATCTTAAGTGTATTCTTACTTACGGTGCGAATGAGAAGCTCACATAAAAACCCCAGATCCTTCGCACCTCGAAATTTGTCGAAATGCATTTATATTCACTTTTATCGTTAGATGTCAATAATCGATTCAAGCTTTTTAAGCATCGTTTTTTTCGAAAATATATGGAATTAATACCGTTAGGGTATTAGTTCCTTCATTTTCGCT # Right flank : TAACTATATTATTTAACTTTCGTAATAGCTCCCAGCAGATTCTTCATGATTGTAGCCAAGATATATTGATAACCTCAGGAATATCGGTATCGTTTTCTTGAAAATATTATTTCCATATGAATATAAAAATATTTGTTTACATAACGAGAATAAATCTAATATGATTAAGAAGTCGCAGATAGTCTAGTATTTTTAGGCGAAATACAAACCTCTTCACATTAAACAACCATAAGTTCGTAAAATGAATCCTTAGACAGGATGCGAAACCGAGAGCCTTGAATTAAGTAGATAAAAGATGAGGGTGGAGCATATAATGCTGCAAGAATATATGAAGATTATCTAAGGGTTCACTTAACAACGTAATTGTTTGATTTTCTTATTCTGGGCTTCGTCGATATTACCTTATGCATGGTCACACATTTAAAATATTTGTTTGTTCAATGGAGGTAAATAGATGAATTTATTAGGACGTGTCTGAAAACTCATTACTGAGTCAATTT # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 148241-147808 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZCE01000067.1 Paenibacillus polymyxa strain ND24 Scaffold_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 148240 32 100.0 35 ................................ TGTAAATACTTTAAGCGGATTTAATTTTGTTTGGG 148173 32 100.0 36 ................................ ACCACTCCGGCTGTACTGGTGATGGTTTCCTTTGGG 148105 32 100.0 35 ................................ TCTATAGGCTGCGTACTTGCCGCTGGCTGCTCCGC 148038 32 100.0 35 ................................ CCCCGCCGCAGCCCGCAGGTTATTGGCTAAATTGT 147971 32 100.0 33 ................................ ATGGGAACATCCGTCCCAAATTGGAAAAATGAG 147906 32 90.6 36 .......................A...A...A AATTTCTATTGTTGGTGCCTCCTATCGGATAAGCTG 147838 31 71.9 0 ..TA...C.C..G.......A.C...-..T.. | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 94.6 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CGGTTTTGAATGTCAGTAATGGTCAAAGTTGTCGCACTCTGTATGGAGTGCGTGGATTGAAATAGAGCGCAAAAAAACAGTCTACTTATATATTAAAAAGTCGCACTCTGTATGGAGTGCGTGGACATGACGGAGCAGCTGCCACTTGGTTGTACGAGTGGGGAGTGCTTCTTTATTCGAAATTATGATGCAAGTCCGAGAAGTGGGGACTGGACATTTTGCGCGGTTTGGAGGGGATGGCGGCGGTACATTACAAAAAGAAAGTAGGGCATATAGGTCTAAGGAAGCTTACGATATGGAAAGCCCATTGATTTTGAAAGGTGCGAATGTGAAGCTTACATAAAAACCCTAGGTCCTTCGCACCTCGGAATTTGTCGAAAAGCATTAAGAATGCTGTCTATGAGAAAAAGACAATAGTTGATATAAGCCTTTTTGGCATCAGTTTTTGCAATAATGTGTGGAATTGATATCATTAGAGCATCAATTACTGCATTTTCGCT # Right flank : GAAACAGAAGTCTCGTTTCGTGACCCGCTCAGCAGTAAATAGTGCAAATTTCTTTTTAACGGAATCCTTATTCGACAAATTCCCCCTTACTTTTATGCAATAATTAACTAACATTACTATGTTGAAATATAAAATTAACTGGGGAGTTGCTTATGAGAATTTCCATGAGTAAGTTTCTAAAGCGTTATGCAACGATTTTATTGAGCTACGCCATAATCATAGGAATATTTTACGCATGGGGTTATAAGATGAGCGCTATGGGCATCTATGCAATTTTGACAGGAATTGTGACTGGAGAAATAATCAACTTCGCATTATCAAAGCACGAGAAATGAACTTATATATCCCTTGATTGCATCAATATCAGGGGATTTTTCATGTAATTAAAAGGTCCCGTGAGTTTTCTGCATGTGACCTCTACATTTGCTGGTGGGAATGCACAAAGGGAAATGAGTTAGTCATGTCAACCTTGTAAAACCTTTTGCTTGGATCAATCCAAT # Questionable array : NO Score: 8.99 # Score Detail : 1:0, 2:3, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 149190-148608 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZCE01000067.1 Paenibacillus polymyxa strain ND24 Scaffold_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 149189 32 93.9 35 ..........A....-................. TTTCCCATGTATGTAGCCTCCTGATGTGTTATGTA 149122 32 93.9 38 ..........A....-................. ATACGATGGTTTATGACGATACGCCATGGGCTGCTATA 149052 33 100.0 35 ................................. AACAACGTGAACGGCAGTTGGATGTGATTCGCAAA 148984 33 100.0 38 ................................. TCTTTAACGATACGTTGATTAAACGGAAATTGGCTGAG 148913 33 100.0 35 ................................. GAAGGCTTTGGCTTTGCACAGCCGGTCCTCACGGA 148845 33 100.0 35 ................................. GGTTCCGAATGTCTTATCCTCAATCGCCTGAAATG 148777 33 100.0 34 ................................. AACCCGGTTTTGAATGTCAGTAATGGTCAAAGTT 148710 33 100.0 36 ................................. AGAGCGCAAAAAAACAGTCTACTTATATATTAAAAA 148641 33 87.9 0 ..........................C...CGG | A [148611] ========== ====== ====== ====== ================================= ====================================== ================== 9 33 97.3 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATTACGTATGATGTAAGCACGGTAGATAGAGAAGGCAGAAAAAGACTGGCAAAAGTTGCGAAAAAGTGTGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATCTTAGACTCGACCCAGTTCCGCCGTTTAAAATATGAACTCGAAGAACTGATAGACAAAACAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTATAAAAAGAAAGTAGAGCATATAGGGGCTAAGGAAGCTTACGATATGGAAAGCCCATTGATTTTGAAAGGTGCGAATGTGAAGCTTACATAAAAACCCTAGGTCCTTCGCACCTCGGAATTTGTCGAAAAGCATTAAGAATGCTGTCTATGAGAAAAAGACAATAGTTGATATAAGCCTTTTTGGCATCAGCTTTTGCAATAATGTGTGGAATTGATATCATTAGAGCATCAATTACTGCATTTTCGCT # Right flank : AGCAGCTGCCACTTGGTTGTACGAGTGGGGAGTGCTTCTTTATTCGAAATTATGATGCAAGTCCGAGAAGTGGGGACTGGACATTTTGCGCGGTTTGGAGGGGATGGCGGCGGTACATTACAAAAAGAAAGTAGGGCATATAGGTCTAAGGAAGCTTACGATATGGAAAGCCCATTGATTTTGAAAGGTGCGAATGTGAAGCTTACATAAAAACCCTAGGTCCTTCGCACCTCGGAATTTGTCGAAAAGCATTAAGAATGCTGTCTATGAGAAAAAGACAATAGTTGATATAAGCCTTTTTGGCATCAGTTTTTGCAATAATGTGTGGAATTGATATCATTAGAGCATCAATTACTGCATTTTCGCTGTCGCACTCTATATGAGTGCGTGGATTGAAATTGTAAATACTTTAAGCGGATTTAATTTTGTTTGGGGTCGCACTCTATATGAGTGCGTGGATTGAAATACCACTCCGGCTGTACTGGTGATGGTTTCCTTTG # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //