Array 1 415157-417431 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRRP01000001.1 Streptococcus rubneri strain DSM 26920 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 415157 36 100.0 30 .................................... TGCGATCGATATGTGCCATATATCTTTTCA 415223 36 100.0 30 .................................... GCCGTTACTTGTGATTTTCATTCTATATAG 415289 36 100.0 30 .................................... ACGCTATCATGTCAGTCATCAACACTGTTG 415355 36 100.0 30 .................................... TATAACAAAATTGTCAGACCTTCTTTGAAG 415421 36 100.0 30 .................................... CCGCACCGTAACCGTTATCCTTTTCGTCAT 415487 36 100.0 30 .................................... TTTCACCTATGACTAGCGAATCAGGTGCTA 415553 36 100.0 30 .................................... GCGTAAGGTGATTTGAAATGATTTACGTTA 415619 36 100.0 30 .................................... ATTCAATCGCCTTACCCGTTAAACGGTCAC 415685 36 100.0 30 .................................... TCATAAGAGGGCTTGGTTGATCCCAATGGT 415751 36 100.0 30 .................................... TGAACACCGTTCACTAAGATAGGAGCGAAT 415817 36 100.0 29 .................................... CTCAACCGCATCAGGAATCTGGAACGGTA 415882 36 100.0 29 .................................... TTGTAAAGAAAGGAATTTGAATCCGTTCA 415947 36 100.0 30 .................................... ATGATTTTTTTAATTTTACTCAAGAAACGG 416013 36 100.0 30 .................................... CATCAGCCGTGATTGGCTTGGTAGGTACTT 416079 36 100.0 30 .................................... CGGATCAATAAGAAATTTGGTCCAAATGCA 416145 36 100.0 30 .................................... AAAGATGCTTATTTTAAATCGGAATACGCT 416211 36 100.0 30 .................................... GGGATGTATCCTCTGATATCACGACTACCG 416277 36 100.0 30 .................................... GTCGAATACTGCCTTGGTCAAACCAATTTG 416343 36 100.0 30 .................................... TGTAAGAAGCGTCTTTCAATCAGTCATTGA 416409 36 100.0 30 .................................... AAGAAGTGGAAAAGAAAGATAATTGCTATA 416475 36 100.0 30 .................................... TTGCAGGGGCAGCAACCACTGCAATGGGTG 416541 36 100.0 30 .................................... GGAATATCATTCTCATGCAATCCACAGGAC 416607 36 100.0 30 .................................... CTTCAGGAAGTTCAACGACATGGAAGACAG 416673 36 100.0 30 .................................... ATTTGTATTACTAGTTTAGCGTAGGTTTCA 416739 36 100.0 29 .................................... ATCTACATCAGTTCCAACACCTTGATTGG 416804 36 100.0 30 .................................... GATTCAATAAAATTTTCTTCCTGAACATCA 416870 36 100.0 30 .................................... CGGGATCTGGCAACATCGAATTTGTATCCA 416936 36 100.0 30 .................................... CAGTAAATGAGTACATCCGTACTAAGGGTG 417002 36 100.0 29 .................................... AGGCTTGCGTGTTGGTGATATCCTCACAC 417067 36 100.0 30 .................................... TGCATAGTAAAATAATCTATTTCACATACA 417133 36 100.0 30 .................................... ACTTCCAAAATGATGTCGCCATTATCTTCT 417199 36 97.2 30 ...................A................ TCGCAAACAATCATAGTCGAGCCAGAGCCA 417265 36 100.0 30 .................................... TCATCACCACCAACATGGGAGGCAAGGCAA 417331 36 100.0 29 .................................... CTAATCAAAAAATTAACACTAGAGCAGGA 417396 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TGGATGATTATTTATCCTATAAGGAATTCGTTGAGTGCTGTGAACACTTAGAGCGATTAACCAATCATAGTAGCATGTTATTCACTATTTCATTTCCTTCAAATGAAGGTTATCTTCATGTAACGAAAGAAGTACTAGAGGAGATTAACATTATTTCAGATTACGTTGAACATTTTTATTCTTTAGAATTTATGTATGAGCGATTTACCAATCAATATCCAATAAATCAAATACCTGATGAGCAAAATTTTTTATCCTCTATAAGAAAAATCGGACCTTATTTATTTAGTTCTGATATTCTCCATATGAGTTTATCAATTGAAGATCAAGTAGCATTGAGGATATTAAACGATTTATATCAGTATGAGGTGAAAATAGATTTCCATATTAAGCCAGTCAATACAATGTTATTAAAGTATTTAGAAGAATAGTATTGACGAGTTAGGTCTAAGACCTTATAATGGTTTTGAGCTACAAAAACCAAAATTGACGAATTTGAG # Right flank : TCAAATAGCAAAATGATTTTAATATATACTTCATAAACCAGCAGTCGCTATTTCCGTAGTCATTTATTGTTTTTTTAAGCTTTTATTGTTACAATATCCATATAGACAAAAAGACTGGTTTTCCAGCCTTTTTAATTGTTTTAAGAAAGGTTTTTTATGAAACGCAAATCGATTTTGTTTCTATTTTTATTCTTGCTCTCGATCGGTCTGGCCTATGAGACGCAGTCTATCACAGCTGGTTGGATGACAGGCAGTCAGTATGGAATCATTGGTATCTCTGTCCTCTTGCTCCTAGTATACGCGATTCCTGCTGTTTGGGCTCTCTTTCATTTTGCCAAGAAGTGGAAGTTGTCCTGGATTCCGGTTCTCTTTTCACTTCTAGGTGGGGGCTTTATCGCAGGTTGGTTGTCTAGTTTTGCCAATACCTATTTCCATGAGATGATTCAGGCAGTAGCGCCCAATAGCGACTTTTGGAATCAGTATGAGAGTGCCATCGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //