Array 1 823580-823061 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FOJX01000001.1 Selenomonas ruminantium strain L14, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    823579	    29	 100.0	    32	.............................	TCGGCTTTGTCGGCGTTGTACTGGGCGTCCAG 	
    823518	    29	 100.0	    32	.............................	GAGCAATGCACGAGGGAATATGTGCTTGAGTG 	
    823457	    29	 100.0	    33	.............................	TACACCAATGACTACGACAACAAGTGCCTGCTC	
    823395	    29	 100.0	    32	.............................	GAGCCGGAACCATTTCGGGTCATAAAAAAGGA 	
    823334	    29	 100.0	    33	.............................	TGGCCGTGTCAATATTACCAGCTTACCCGCAAA	
    823272	    29	 100.0	    32	.............................	CAGGAGAACGAACGTCTCCGTACACAGCTCAA 	
    823211	    29	 100.0	    32	.............................	GTGGGCGGTAAAGGCAATATGCCGGGGAATCC 	
    823150	    29	  96.6	    32	..........................T..	GTTGCCAACGCTGACAGCATGACCGACACCGA 	
    823089	    29	  79.3	     0	......................AAT.TAT	|                                	
==========	======	======	======	=============================	=================================	==================
         9	    29	  97.3	    32	GTATGCCCCACGCAGGTGGGGATGAACCG	                                 	       

# Left flank :   GCGTAAATCTACAATGGGGGAATAACGAATGAAAAAGTTCAATATCACGGTAAACGGTACGGCTTATGAAGTCGAAGTTGAAGAAGTAAAATCCGCTGTTGCAGCTCCGAAGGCTGCTCCTGCTGCACCGAAAGCAGCTCCGGCTCCGGCCGCTCCTGCAGCTCCCGCTGCACCGAAGAAGGCTGCTGTAGCCGCTGGTGCTGGTGAGCACTCCATCGATGCTCCGATGCCGGGCAAAATCGTGAAGCTCGTTGCTTCCGAAGGTCAGGCTGTTAAAGCTGGCGAAACCCTGCTGATTCTCGAAGCTATGAAGATGCAGAACGAAATCGCAGCTGACGCTGACGGCGTTGTTAAGAGCTTCAACGTGGCTGCTGGCCAGAGCGTTAAGGCTCATGAATCCCTGGTTATTCTGGGCTAATTCCATAGCGAATCAGAAAAGAGCACTGCGGTGCTCTTTTTTGTGTTTGCAGGGAAAAAGGCAGCCTAGGGAGAATTTTATA
# Right flank :  TAAATTTTTTAGAAGCAGGAAAAATGAGATGGTGTAGCGAAGCGAAAAAGAGTGAGTTGGTGTTAGATTAAATGATGAGCGAAAGTTACTGAATAGGGATGATATTGTATATATTGATAATATAAAGTGAAGGTGATGTTTTGTCAGGACAAGAAAAACTAAAAAGTGAAATTGCAGAGCATTTATGGGCGAAAAGTGAACCTTATAAACCGTTGTGGATGCATTTGCTGGAAACAGGAATTATTGCTCAAATGCTGATTAGTGAGGGAATATTTTATCCATTAGCAAAAGAATTGAGTAAAAATTTTGGCGTATCATTGGATGAGATTACTGACTTAGCAGGTTATATTGGAGCTGTACATGATATTGGAAAATGCCATGTGAATTTTCAGATTCAAACAGATACGATGAAAGTCGCTAAAATATTGACGGATAATATTATAGTGGTTCCTGATTTGAGGGGATTCAGGCATGAACAGTATGGTAGTGAACGGTTAAAC

# Questionable array : NO	 Score: 6.12
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATGCCCCACGCAGGTGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 90% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.20,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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