Array 1 247278-245471 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTW01000002.1 Prevotella sp. R5025 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 247277 32 100.0 33 ................................ ACGTTGGTAATTTCGTTGACGATACCGTTGGAT 247212 32 100.0 34 ................................ CGTGATACCTATCATATCAATGTCGACGCAGCTC 247146 32 100.0 35 ................................ CCTTAATTTAACGTTATGAAACAGATTGATTATAA 247079 32 100.0 35 ................................ TACAGTTGCTAATTCTATATTCGCAGGTCTGCAGA 247012 32 100.0 34 ................................ TTGCAAACAATCATCTCGCAACCGTACATCCTCC 246946 32 100.0 33 ................................ CTCAGTCTTTAAGATAGATTCTATTGAGCGAGT 246881 32 100.0 33 ................................ CGTGACTTTGTCTATGATTGCTGGTCGTTGCGA 246816 32 100.0 33 ................................ TCATTCCGCAATGTCGACTTTACCAATTTTACA 246751 32 100.0 33 ................................ ATAGTTCAGATGAACGACTATCGTTCATCGCTA 246686 32 100.0 35 ................................ TCAATTCTATCGGTCAGCCAAGTGTTGGTACTTAT 246619 32 100.0 33 ................................ CGACTATTTTAACCCGCTCTATCAGCGACTCGG 246554 32 100.0 33 ................................ TCAATCTCACTCTGGTTATCGTTCTACCCCCCT 246489 32 100.0 35 ................................ TTTACCTGATTATGCTGTAAACCTTTTTCGGCTTG 246422 32 100.0 34 ................................ AGACTCGAGAAGAAATCAAGAACGTTGCTGAAGA 246356 32 100.0 35 ................................ TAATCTTCCTTACATACTTACGCTCCGTCCGTGGC 246289 32 100.0 35 ................................ AGATTCCAAAGGCGCATTTGTTTCTTCTGCCTTTC 246222 32 100.0 33 ................................ GTACTAAACGAGATGATTTTAGCGTTCGTGTAT 246157 32 100.0 33 ................................ TGCAGTCTTGTGGAAAGTATCGCCATAATGACC 246092 32 100.0 32 ................................ AATCTTCGCAGGACTGCAGACACGAGAGCAAA 246028 32 100.0 33 ................................ CCTGTCCTTTAACGACAACAAAAAGCGGTGCAA 245963 32 100.0 36 ................................ AGACCTCAATAATGTTTGCATTATGACGCAGTGGCC 245895 32 100.0 34 ................................ TGCAAAGCGAGCGTCAGGATTTCGGAACTTACGA 245829 32 100.0 34 ................................ TACCATCAACAACAGCTATTTTGTGAATCATAAA 245763 32 100.0 33 ................................ AACCGTCTCAAAGCATCCACAAATCTCCCTACG 245698 32 100.0 32 ................................ ATTTTTCAGACAAAAGTGCCTACCTTTGCAGC 245634 32 100.0 33 ................................ TTGTCCGAGTCGCTAAATTGTCCGGGCTTGCCA 245569 32 100.0 35 ................................ TTTTCCGCAAAGATAGTCTATATCATGTGTTGTGA 245502 32 93.8 0 ....................A........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.8 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ACATCTATCCGTTTCCTGGCCTTGGACTTGCTTCTCTCGTAGGCGTTGCCCACAATATCAAGTTTTTCCTCCTCGACAAGTCTGGCCCAGTACGCATGCACTCTGTCACGAACCACTTCCGAGTAACCTTGCAGTTTCTCATCCCAAAGTTGGACATCCTTCTGGTGATTGTACAGATACGTCAGTCCACGCGCAACATCTCTTATCTGCTCTGGGGATAGGTCATGTATAAACCCGACATTGAGCAATATCAAAGTACATACCCTACCGCTGGCATCGCGATAGGACTCCTTCAGACGGTAATACTTCTCGTCTTTACACGTCTGTGGGTTGTAACGTATTTGGGACGTAAAATTCATGCCGCAAAGATAAGCAATCCCTACGACATTGCTGTGTTCTACATTGCGATTTTGAGCAGTTTGACCACGCAAACCCCTATAAACACTGGAAAAAATTCTGAAAAAAAACATTAGAGCGTCAAACTTGGGTTAACACTAATT # Right flank : CACCTACACTCAGATTCTTGAAAGATAGAAGATTTTGTATGTGCGTGCAGAATACTATAGGAATCCCTCGCACAAGCCTCAAGGCTGCAAGGAACAGGCAAATCCTTTGCGGAATCTTTGCGACCTTTGCGACTTGGCGAGATTTTTTCGGAGCAAGAGGATGGGGATATAACAAATCTTTGCAACCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGGGATTTTTCGTGGTAAGGGAATGGGGATAGAACGAATCTTTGCGACCTCTGCGACTTGGCGGGATTTTTCGAGGCAAGGGGATGAGGATAGAACAAATCTTAGCGAGCGTGGAGCTTGGCGAGGGGGCTTTCGTGGCTGGAGGACGGTGATAGACGCAGTGAAAGGGTATTAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 253204-249414 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTW01000002.1 Prevotella sp. R5025 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 253203 32 100.0 34 ................................ TGTCATGAATACCTTTTCGCCACGTTTCAATCGG 253137 32 100.0 33 ................................ ATTTATGTCAAAAAACAACATCCCGCCTCTTTT 253072 32 100.0 32 ................................ TATCGGTCAGCCCTCTGTTGGTTCATATCAAT 253008 32 100.0 35 ................................ CGACTATTTCAATCCGTTATATCAGCGACTTGGAC 252941 32 100.0 34 ................................ GTATTCTCTTGATGACCTCGGCACGTCCGCACCT 252875 32 100.0 34 ................................ CGGGACACCTATCATATTAATGTCGACGCAGCCC 252809 32 100.0 34 ................................ TTGATGATCTCGGAGGTAACGCACTTGTCGGTGC 252743 32 100.0 32 ................................ TGCTGCCGTTGCATCATATGTTAGTAGCTACG 252679 32 100.0 34 ................................ CTTTTTGACGACCCGAACCTTTGTACGTCATTGT 252613 32 100.0 34 ................................ CGAAGAACCCTGCTACTGGTGTTCGTGATGACCT 252547 32 100.0 34 ................................ ATGATACGTATCACGTTAATGTCGATGCAGCCCA 252481 32 100.0 35 ................................ TTCACCGTGGCTTATGTAAGTCCGTTGAAAGTGGT 252414 32 100.0 34 ................................ CTATGTAGCTGTGATAGTCCTGACTCTGTGTCTA 252348 32 100.0 34 ................................ TAATCACTGGTTGCCTACCGTTCATACTTTCAAA 252282 32 100.0 34 ................................ TCCCCGTCCGTTTTATCGGGCTTATGGGCGTGGT 252216 32 100.0 34 ................................ CTCCTGCGTCAAGAAGGCATTATCCCGGTGGTCC 252150 32 100.0 35 ................................ CAACAGTGAAGTGAGTAATCTAATAGGCACGAATG 252083 32 100.0 34 ................................ AACATTTCCACCTCTGCCAGTCCACTGGCTTCAC 252017 32 100.0 33 ................................ ACGCTGTCAAAGAGATTATTAATACGTTTCACA 251952 32 100.0 34 ................................ AGCGAAGCAGGACATATTACAAGCACTGGCCACG 251886 32 100.0 35 ................................ TTAGCCAGTTCGAAGCAGGCATTGCGTGCGTAGAT 251819 32 100.0 35 ................................ AGGATAACGGATATTGTCGATTAAGTGAGTATAAT 251752 32 100.0 34 ................................ ACTACGTGCTGTCGATGCAATTTGTTGAGCGCAT 251686 32 100.0 33 ................................ AAGGGAACAGAAAAGACCGTTGCCGACTTGTCC 251621 32 100.0 35 ................................ AGTCCACACCTATTTTGTCACATAGACCCCCCAAA 251554 32 100.0 34 ................................ TACGCTGCGCTGCGCTTGCGTCCTCAGCCACTAA 251488 32 100.0 35 ................................ TTTGCTAAATAGTTTTGGTATATACTTAAATTATA 251421 32 100.0 34 ................................ AATTCGAATTTAAGATTGTTCTCAGCCATAAAGT 251355 32 100.0 34 ................................ CTCTATCAGCGGCTCCATACGTCCCGCCGCCCAG 251289 32 100.0 34 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGTG 251223 32 100.0 33 ................................ TGACAGAGCTGCAGAGGCCATCGAGAATCACAT 251158 32 100.0 34 ................................ ACTCCTTGCTGGTCTTGATACTCTCCATAATGGA 251092 32 100.0 34 ................................ CTGTGTGCTCTGTCCTCTGCCTGGCAACAATCAG 251026 32 100.0 34 ................................ TTCCTGGGCCTCGGCTATTTCCTGCTTCTTCACA 250960 32 100.0 35 ................................ CGGATAATTGGGATAGCCGTAGCCAACACCCCAAC 250893 32 100.0 34 ................................ CGCATCCGGCTGGAGGCTATCGAACTCTACGAAT 250827 32 100.0 34 ................................ AGTAGCTCAACTGGATAGAGCAACTGCCTTCTAA 250761 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 250695 32 100.0 34 ................................ ACAAAGGAACGTAGTTTAACGAAGAAAGACTGCG 250629 32 100.0 34 ................................ ATTAATACGTATAATTATGATTACAACTAATGAC 250563 32 100.0 34 ................................ AACTTAGAGCTGTCTACGCTTGTGCGTGTAGTCG 250497 32 100.0 34 ................................ CTTAATATGGCTTGATTTGTTAGCACCTCCGCAG 250431 32 100.0 32 ................................ AATTATCTAAAGATTATGCGCCGACATGCTGA 250367 32 100.0 33 ................................ TTAAACTCACGTCTCCAGTTCTCTTTCAGCGAA 250302 32 100.0 33 ................................ CCTTTAGTATGCGTAGTAAGTAACCTTGATACC 250237 32 100.0 33 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGT 250172 32 100.0 35 ................................ TTTTCCTCTGCGTCTATATAAGACTGCATCGTATC 250105 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 250039 32 100.0 33 ................................ ATAAAGGAACGCTACACAGGCAAGGACAAGGAC 249974 32 100.0 33 ................................ ATGTCAGACATGCAGCAGACATAACGAGAGGGG 249909 32 100.0 33 ................................ TTGTTTCTCCGTTAATTACGACGGTTCACTTCT 249844 32 100.0 34 ................................ CGCCATAGGAACTTGACTTAATTTTTTGGAAAGA 249778 32 100.0 36 ................................ AAAAGGTCAAGACCATAGTTACGATACCGAGGTTGT 249710 32 100.0 32 ................................ TGTACTGAATCTTCTAATTGGTCACAAGTGGC 249646 32 96.9 36 ........T....................... TGCGTCAACTAAGATTCTCTACCCCCGAGCGGAGAC 249578 32 100.0 34 ................................ AAATCACGGAACGCACCCACCTTTAGGTTTGGCA 249512 32 100.0 35 ................................ CTCGACCTTCCTGTGTGTTTCCTTTGGCTCGTACA 249445 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.9 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ATATGTTCGTACTGGTTACTTATGATGTGAATATCACATCGCCTTTAGGACAAAACCGACTCAGACAGGTTGCTAAAACATGTCTTAACTACGGAAAGCGCGTTCAAAATTCTGTATTCGAATGCGTCCTGACTGAAGCTCAATTTGTACTGCTAAAGGATAAGCTGTCTGAAATAATAAGTCAATCGGATGACAGCATTTGTTTCTATAAATTAGGTAACAATTGGAAAAGACATGTAGAAAGAATCGGCAAGGACACGTCAGTCGATGTGACTGACGTCTTAATATTATAATGCACTTCACCCATACTTACTCTCAGAATGATTTCGTTTATGCGAACCCTAACCGTTGCACTAAAAGCAGGAATTTTCGCAGAGACTAATACACAGGCAGTTAAGCTTTTTGAAAGGACAATATGCATTTAAATAGCTATGCTTTTCGCCATGTTCGCAAAATATAGTAACTTTGCCTCTGATTATTAGGCAATTGTCTAATAAGCG # Right flank : AGCCCCTCTATATGTATGAACTTAACCCAACTTTGACATCGTATTTTGCTTAGTTGTTCTGTATCAGCAATTTAGTGTTTTTAAAAAGTCCTACTGTGTTCTACAGATTTTTATTTTTTTAAATGGCACTTTACTGATTTTCAACAACTCGTAGATTTCAGCTGCACTATCTGTAGGCACACTGCACAGTCTGGTCTCGACAGCCTCTCCAAGCGCATTTACTGCTGTGGTAGTAACTGCTTTTTGAGTCTTCATGATCCGCATGATCTCCGACCAGTACGGTGTCGAACGCTCCCGCCCATGCTCATCCTTGCCTTGCTTTCGCCGGGCAACCTTCATCTGATGGCGCACGGTGTTTACTATCCAGTAAGCCAGCAGCCCTAAGAAAAGGTGTGCGTCTGCCCTATTGTCAGTCTGGTGGTATATGGGCCTGAGGCTGAGGTCGGTTTTGAGCTGCCGGTTGGAGCATTCTATTTCACGTATAAGATTATAGTAGTTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 283891-287594 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTW01000002.1 Prevotella sp. R5025 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 283891 36 100.0 30 .................................... TGACCGACAGAGTTCAAGAATGGGCCATAT 283957 36 100.0 29 .................................... ATATAGTGAAAATATAGAAACAAATAGTG 284022 36 100.0 29 .................................... GAGTATATGCAACTAACTCAACATTAAGA 284087 36 100.0 29 .................................... TGGACGAGGTCGTCACGTACTCCAGTTGC 284152 36 100.0 30 .................................... CTGTAGTCATCGAGACATAAGAACCTTCAG 284218 36 100.0 29 .................................... AAGATTTGTTAACAAATCCAGTCCGTAGT 284283 36 100.0 29 .................................... CGCAGGATGCTCATATAGCTCAGACCTGG 284348 36 100.0 29 .................................... GACAAACTCAAAGATGATGGTGCGCTATG 284413 36 100.0 30 .................................... GCTGCCATCGTGAACTCGATGCCCTCCAAA 284479 36 100.0 29 .................................... GCAAGAGAGCCGAAGAAATCAACAGGCAG 284544 36 100.0 30 .................................... GACAAAGCGCATTTCTATACTCAGAAGAAA 284610 36 100.0 30 .................................... TGAACGATGTCTCTTGCGAGCCGTTCCTGA 284676 36 100.0 30 .................................... ACTATCTTCGATGCTTTCACTTGGCTCTTA 284742 36 100.0 30 .................................... TCATGGACGGTGAGGTAAAGCACGACCATG 284808 36 100.0 29 .................................... TATACAGCCACAGCAAGCGGCACCATCGC 284873 36 100.0 30 .................................... GCAAGCATCACGGTATCATCGCAATACCTG 284939 36 100.0 29 .................................... CCAGCGGTTTTATACTAAATACAGTAAAC 285004 36 100.0 30 .................................... GGTTATCTCAAACTCAACACAGCCAGCACG 285070 36 100.0 29 .................................... AATCTGAATTTCGCGTCGTTCGAGAAACG 285135 36 100.0 30 .................................... GGGATATATCACCAAGATAGAGACATTCAA 285201 36 100.0 29 .................................... AGGCTTCGAGAATGGTCTCTATGCTCGTG 285266 36 100.0 29 .................................... TCCATCGCAATACATAGCATCATAACCGA 285331 36 100.0 29 .................................... GCTTGCTCTTGCGTGTGTCATGCCATGCA 285396 36 100.0 30 .................................... TGATAAAACGCTTTTTGAACAAGGAAAGGT 285462 36 100.0 30 .................................... CACACACCGAAGATGCAAAGTACCTCCGTC 285528 36 100.0 30 .................................... GAGAACGACTGGCAGCGGCTCGCACAGTTC 285594 36 100.0 29 .................................... TAACTACTATGATAGTGGCAACCTCATGC 285659 36 100.0 29 .................................... CGTCCGCAACCATCCCAAAAACTATTCGG 285724 36 100.0 29 .................................... TGGCCTTCGAGGCCTTCTCGGCCTGTGCG 285789 36 100.0 29 .................................... CTTCGATTTCTCGTTGTTCAGATTGTACT 285854 36 100.0 30 .................................... CCAACGTGGTAACCCTGACCTATTAGGATG 285920 36 100.0 30 .................................... CAAGAGCACGAACGTCTGAAATGGTCGACA 285986 36 100.0 30 .................................... TTTTCGTTCAATGCTACTTTGAACAAGTCG 286052 36 100.0 29 .................................... GTGGCAGTGCTAACATTCCTAAAGTATTA 286117 36 100.0 30 .................................... CGTAATAAGGGAAACGAGGAGTGCAAAATG 286183 36 100.0 29 .................................... CTGGAGGCTATCTATAAGAGCGCCGACCC 286248 36 100.0 30 .................................... CGTGATGAATTTACTTACAACGGGGTTTGG 286314 36 100.0 30 .................................... GTTTGCCAAGCTATTAGGCGTCAGTCCTCA 286380 36 100.0 30 .................................... TTTGGACTCTCTTTGCAATTCCCTAATATG 286446 36 100.0 29 .................................... TCGATACTGAATCGACTACGACTCGCAAA 286511 36 100.0 30 .................................... GGGCAGCGTCGACGTTGATGCTGTATGTGA 286577 36 100.0 29 .................................... TTTATGTTTAATTCTTCTATTGATAGATA 286642 36 100.0 30 .................................... TTTAATTTAAAAATAAAGAGCATAAATTGT 286708 36 100.0 29 .................................... CCGCAATGAGGTCACCGGCAAAAAAACGA 286773 36 100.0 29 .................................... GCTTTCCAGATGAAGAGTAACGGCAGTAG 286838 36 100.0 29 .................................... ACTAATTGTTATATGCTTGCAAGTATCAA 286903 36 100.0 30 .................................... AGTGTTCAGCACCATTGCGGTCACATCCTT 286969 36 100.0 29 .................................... CAGAAATTCTTTCATTGCCGTTTGATTTA 287034 36 100.0 30 .................................... GCGGCAGCCTTTCGGGGTTGGGCAGGGCGA 287100 36 100.0 30 .................................... GCAGCGTCTTGTCCACCGCTCCATTGATAT 287166 36 100.0 29 .................................... ATATTTATTGTGACCCGCATGGGGTAATG 287231 36 100.0 30 .................................... TAGAAGGGGCGCAATATCTCCTTATCGCTG 287297 36 100.0 29 .................................... TCGTAATGATACGAATGAACTACACCGAC 287362 36 100.0 30 .................................... CAAGATGCCAAAGGCCCGACAATTCAAGCA 287428 36 100.0 30 .................................... GATGGCATGCCGGGTCATCCACGCATCCAT 287494 36 100.0 29 .................................... TCGCCGATAACGCCTATGCGCTGCTGTTC 287559 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 57 36 100.0 30 GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Left flank : AAATTCTATAAAGGTGAAACAAAAAAGCTTTCCTTGCCAGTTCTTATATGACTTTTAACCGACTTAATGCATATCATATCATGTGGCTGTTCGTATTCTTCGACTTGCCTGTGACTACAAAGAAAGAACGCCACGACGCAGCACTCTTCCGTAAGAACCTGGAGAAAGATGGCTTCTCCATGATGCAATTTTCTGTTTATATCAGGCATTGCGGTTCCTATGAGAGTATGGATGTTCACGTCAAAAGGGTAAAAAGCCTTATACCAAAATATGGGGCCGTAAGTATTCTCTCGGTTACAGACAAGCAATACAGTAATATATATAACTTCCGTGGAGTACCTAAAAATCAGAAACTAAAAAAAGAAATAAAACATATCAGCGAACCGATACAATTAGAACTTTTTTAGTATCTTTGCACTGGAAATAGACCTACACTTCCGTTTTTTTTATCTCTCCAATGGCCTTGAATCTCTTTATTTAAGGGCAATTTAGAGAATAAG # Right flank : CTCTGCACTGCCCAGTCACTCTATGAGCGAGTTGCGGTTTGATTAAAGAAACCTCCATTTGAGACACTATACAATTTGGCCCTTGCTTTGCCGTTTCTGGCTTAGCAAGGGCTTTCTTTCGTAGAAAGCCCGTTTAAACTTCCCCTTGTTTTAGTCTCTGCATAATTATTTTTGCCAATATTATTGGTAATTTCTTGCAGATATGGCCATTTATTTGTACCTTTGTATAGTTCTTTTAATTATATAGATACTATACATATTTATGGCTATTCCAGAAGAGATAAAGTCAGTCGCCCGCCCCAAAAGTACGATAGTCCGACAGAGAGGCAGTCGTTTTGTCGTCATAAAAAGGACGAGCAAAAGAATTAACGGGAAACCTGTCCCCGTAGACATAGGAACGGTAGGAGAAATTGTAAACGGCAAGTTTGTCGAGGGCTCATATATGCGCAAGAAAAATCAAGTGGATATTAAAGATTATGGAGAGGTGGCTCTCTGTGACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 4 292789-293013 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTW01000002.1 Prevotella sp. R5025 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 292789 27 96.3 38 ......G.................... TGGAAATCAGATGTATTGAGTATTGTCCAGTTGCGGTT 292854 27 100.0 39 ........................... GTACTTGCCGGTCTCACCCGCGGCCGTTACGTTGCGGTC 292920 27 100.0 39 ........................... AACACCTGGCGCTCATCAATCAAGCTGTGGGTTGCGGTT 292986 27 85.2 0 .................C...G.A..G | G [293007] ========== ====== ====== ====== =========================== ======================================= ================== 4 27 95.4 39 TGATGTAGGAATAGAACGATATACAAC # Left flank : CTTTCCATTCACGCCCACATCCCGCAGCGCCAGTTCATAGGCGACTCGCAGGAACTCATTCAGAAACTCAACACGATTATCAATAACTCTTTAAAAACAATAAAAGATGGAATCATTACTCTTGCCAATCATTAATTACATTTCACAATCATTCCCCGAAATTCCTTACGTCGACGAGGACTACGGACAGCTCGAAGCCATCGACAACGAGAACATGGATAACTATCCCGTCGTATTCCCCTGCGTCCTCATCAATACGGATTCCGTCGACTGGTCGTCCCTTTCTGCAAAATCACAGAAAGGCAATGCGCACATCTGCGTCCGGCTCTGCATCGACTGTTATGCCGACACGCACTTCGGCTCTAACACTACAGATAAAATAAAGGAACGCGCCGACCTTGTCCACTCCCTCCACGCCGCGCTCCAGACCTACCGACCACTCGCCGTCGGCGCGCTCGTCAGAACCAAGTCAAAGTTCTACGCCTGGTTCCAGTTGCGGT # Right flank : GATAGGCGGCACTACTTTTGATAAGATAGGCTGCTCTCGGGAATGAAAAGAAAAACGATGTTTTTCTTTGTCATCCCACTCGTTTGTACTATCTTTGGGTAAGATAGGCTGCACCTCGGAAATAAAAATAAAACGCGTTTTATTTTGTATTTCCCTCGGTTTGCACTATCTTTGCAAAAAAAGAAAGGAATAATGAATGAAACCGATACTCAACGACTATCACAAGAAGATCAACGAGGTGAAACTCCAGTCCGTGGAATCCTGGAGCAAGCTGAAACTGTCGCACAAAGAGTGCTTAAATCAATTCAAGCGGTTGCGGGAACAACGGATTGCAAGAGAGTCCAAATCGCTCGCTTAACAGATTTTGCCAAGAATAACAAATGCTGGATAGATTCACCTGAATCACTTGGCGATTTTGCTGATAGAGGTTCGGAGAACGAAGTTTATCTATCCAAAGACAATGATGTTGTTTATAAACTGAATGACTTCCGTTATTCAGA # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //