Array 1 52550-54829 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANBF01000205.1 Nocardiopsis salina YIM 90010 contig_205, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 52550 29 100.0 32 ............................. GCAGAGACCACCCGCAGGGTGTAGTCCATGAG 52611 29 96.6 32 ............................T CCGGGAGAAGAGCAGATCACTCTCGCCCTTGG 52672 29 100.0 32 ............................. AGCCGCGCTCGTTCAAGACCGAGGGGGTGGGC 52733 29 100.0 32 ............................. CAGTGCTGCAAGACCTCGGTCGGCGTCATCAT 52794 29 100.0 32 ............................. GTGCAACGCCGGGTTGCACATGCAACCCCGCG 52855 29 100.0 32 ............................. GGCCGACGCCTCACCGGAAAACAGTGACGCAA 52916 29 100.0 32 ............................. TAATGGACTTCCAGAATTTCGCCCGCCACGTA 52977 29 100.0 32 ............................. CTCGGGGAGGGAACTGCCACGGAGTTCGGGAC 53038 29 100.0 33 ............................. TTGCCTGCGCCGTTGGTGCGCACGCTGCGGCGC 53100 29 100.0 32 ............................. GTGATCGCTTCCATCAGGTTGTCGTTGTACGT 53161 29 100.0 32 ............................. CGCTCCTCAATCTTGGTGGCCGTGAGGCCGAC 53222 29 100.0 32 ............................. GCCCGTTCTGAGGACGCGCAGCGGCGGGTGGA 53283 29 100.0 32 ............................. TCTACTCACGTAGAGTCACCACAAACGCGAAG 53344 29 100.0 32 ............................. GGTTGTCACCACCCTTCGAATCAGGCACCGGG 53405 29 96.6 32 ............................T CAGGAGGAATTCCCACTGTTCGCCGTTCCACC 53466 29 100.0 32 ............................. TGCTCCTCGTGTGGCACCCCGGGGAAGGGCTC 53527 29 100.0 32 ............................. GAGATAGCAGTGAGTGTTGCAAGCTCGGTGGA 53588 29 100.0 32 ............................. GCATCTCCGCGCTGAACGCGATGGCTCCGCCG 53649 29 100.0 32 ............................. GTGTGGCGCAGGGTGTGCGCTGAGATGGCCGG 53710 29 96.6 33 ............................A GAACTCCAGCAACCCCTGGTTGATGATGATGTG 53772 29 100.0 32 ............................. AGTCGGCGCCGTACTCCTGCACCAGGCAGGAC 53833 29 100.0 32 ............................. CAGAGGTCGACGACGACCAGCTCGCCCTCGCG 53894 29 100.0 32 ............................. GCCCCCCGCACGGTGCGCACCAGGTCGGTTGC 53955 27 93.1 32 .................--.......... AGCGTCATCACGATGCGCATGACCAGTGCTTG 54014 29 100.0 32 ............................. GGCGCGTCTTCCAGCAATCGGGGGATGTTGGT 54075 29 100.0 32 ............................. TTGTCGAAGCTCTCACCACACCGGGACTGGGG 54136 29 100.0 32 ............................. CGCTCAGCAAGGGATCCGCACACGTCATGCAG 54197 29 100.0 32 ............................. GGCGAAACGTTTGTGGCCATCAACCATGGACG 54258 29 100.0 32 ............................. CGTTGACCGCTCTCGGGTTCGCCGGTGACCCC 54319 29 100.0 32 ............................. GCGAGCCCGTTCCTGAAGCTCTGCACGCGTGG 54380 29 100.0 33 ............................. GGGGTGTCAGCTGTCGGAGTCGGGGGCCGTGGC 54442 29 100.0 32 ............................. CCGACCATAACCAGCGGCGACGCCTGAGTCCT 54503 29 100.0 32 ............................. GCTTGCGGTCGGATCCCAGGCTGCGGTCTGGG 54564 29 100.0 32 ............................. CCGGACACCGCATACCCCACCCCGCCACCGTC 54625 29 100.0 32 ............................. GGGCACCTGAGCGTTCCCGCCCATGAGTGGAA 54686 29 89.7 32 ......T.................GG... TCGGGCCGGCGGGCGTGGTAGACGCATGACCC 54747 29 75.9 24 .....................GCCGCGG. TGCTTCACGATGCACAATCGATTG C [54765] Deletion [54801] 54801 29 79.3 0 ....T...T.....T.........GGG.. | ========== ====== ====== ====== ============================= ================================= ================== 38 29 98.1 32 CCGAGCCCCACGCACGTGGGGATGAACCG # Left flank : ACTCGGACCACGCGTGCGGAGCCCTTGACCCCATTTCAGGATCAGGCCTGGCGGTGGGCGGTGGACCAGGAGCGTGAGGTGGGAGTGCTGCCGACCGGCGCGCAGATCGCTGAGTGCTTTGGGCGCAAGGAGCGTTGGGGGCGACTGGTCAAGGAACGAGGGCTCCGGCAACGGAAGGGTGCAGCTGAACACGAGGCCGATGCCCTTGCTGAACACTGCTAAAGGGATTCCTCTACGCTCGTTGGCTGGGTTCTCGAGCCCTCGCAATTGGCGTTGTTTGGAAGCCTTGTTCGGATCGTGTTTTAGTAGCACGGCGATGCTCAGCAGTGCGGGACGACAAGTTGGCGGGAGGTGCACCATGGGGCTCGTGTACGGGGCAGGAGCATCTGCCGCCAGGGAGTCGATCACGGAGTGTGCTTATATTGTTACGGCCGAGCGTGCTGCTGCGGTAATTTCGATTTCGAATTGGTAACGGCGGAAGTTTGTGCAGGTCGGGAAGT # Right flank : GGTCCACTGCGTGCCGCAAACCCTGTGACGGAGCATGCTCGCGCGCATCGGCATCGCGCTGGGGCTCCCTGAGCTTGAAGCGTGGGTCAGTGCCAGATCTCAAAATGTCAGAGGCGAATCATATGCTTCCGCATCAACGACCTACAGCCGTTCAGCGAGGTTCACGGTGACTATGGAAGACCCTTCTGAGCAGGGCCAGGTGCCCGAGGGTTTGGATATGTCCTTGTGGGGCAAATCTGAAGGTTTGCCCCCTGGAGTGCGCTACCCCCTGGTTTGTCACCTTTTGGATGTCGGCGCGGTGGCCGAGGTGCTCTGGCGGGACCATGTCGCAGTCGGTGTCAGACAGACCATCGCTGACGGCCTGGACACCACGGTCGAGCATGCGGGGAAACTGATCCCATACTGGGCTTCCCTCCACGACGTCGGGAAGCTCACTTATGGTTTTCAGGCTCAGGATGCCGCTGCGTCGCTACGCGAATATCCGTCATCGGGGTTCCGCC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGAGCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 64422-64755 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANBF01000205.1 Nocardiopsis salina YIM 90010 contig_205, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64422 29 100.0 32 ............................. TGGTGGGAGGCCTGCCCCGTCTGCAAGTTCCA 64483 29 100.0 32 ............................. TGCCCACGCATACGCACTGCCCACAAATGCCG 64544 29 100.0 32 ............................. AACGTGAAGAAGATGTTCGTCCGTGCCGCGAG 64605 29 100.0 32 ............................. TTCCCAGTTGACTCAACCCAATGTTGTACAGA 64666 29 100.0 32 ............................. ACGACGGCGTACGCCTCGTTCGGCCTGGGTGC 64727 29 96.6 0 .........G................... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GCAGGCCCCACGCACGTGGGGGTGAACCG # Left flank : CCCGGAGTCAGGCAGAGTCCGTGGTGGAACCAACTACGGCGACGAGGTGCTCTAGGAGAATCGTGTGGCGAACTTGGTGGTCATCACAACAGCAGCTGTCCCCGACCACGTTCGAGGGGCACTCACGCGATGGATGATCGAGCCCAAGGCGGGTTGCTACGTGGGCACGCTCTCTGCCCGGGTGCGCGAGGAGCTCTGGGAGGTTGTCAGCGCCTCTCTCGGCGAAGGTTCGGCTGTCTGCGTCCATCCTGCGGACAACGAGCAGCGTTTCCTTGTCAGGACCGCTGGACCTCAGCGCCGTGAAGTCGTTGACTACGAAGGCCTCCAACTGATCCAGATGAGCCCCGAGGAAGCGGGCGGCCCCCATTGGGTCGAAGAGAGCCTAAAGCCACTAAACAGGGGTGCTACCGAGAGTGATCGTGTAATCACGAATGGGCGCTCAGGTGCGTGATTAGTGATCAAAAAATGGTAACGGCATGCAGCGTGGCAGGTCATAAAGT # Right flank : GCGGCTGTGGCCACGACCTGACGTCGCGTCTCCGGCAGGCCCCACGCACGTGGGGGTGAACCNGCCAATGGAAGGAGCAGGCCCCACGCACGTGGGGGTGAACCGCTCTGGCCCACCGCGGACGCCTGCGACTGGTAGCAGGCCCCACGCACGTGGGGGTGAACCGCTCGGCATGGTGCTGGGCGGCGTGGTCGTGATGCAGGCCCCACGCACGTGGGGGTGAACCGTCCGCAGGCGCCTCCAACGCCGCAAGCGCGCCGCAGGCCCCACGCACGTGGGGGTGAACCGTGCCCGGCGTGTCCGTGGCCCTGGCCGCCAACGCAGGCCCCACGCACGTGGGGGTGAACCGGAACCGGGCCTCCGCCACCGCACCATCGACCTCCAGGCCCCACGCACGTGGGGGTGAACCGCACCGGGCGCCCCCCATCGCCCAACAGGTCGCGCAGGCCCCACGCACGTCAGGGCTCCGGCAAAGTCCGTTGGTCATCTTGTCAGCAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGGCCCCACGCACGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //