Array 1 54207-54374 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV798318.1 Lactobacillus sp. HMSC068B07 Scaffold186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 54207 36 100.0 30 .................................... CCGCCTTTTTCATGTTATCAATAACCGCGT 54273 36 100.0 30 .................................... ACAATACCCCGCCATATCCCCCTTAATGTT 54339 36 91.7 0 .................................NNN | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 97.2 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : TTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGTTCCACTAAACTCACTCCTCAACCAGCAGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACCCTAGGCCGCCCTTGAGCAACCGGTTCACC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAACCGTTTCGATTTCCTTGCAAAAGAGACGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAGCAGACGGTTATATTTTAAAAGTCAGTGAGTCTCAGGTAGATGTCAGATTAATCAGTTCAAGAACTCGGTGTCGGTGTCGTCCTTATGCAACAACGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTTACAATGAAGCTCAAAAGTGACGTATTTCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTATGGTGCCGGCGATACAACTGGTCGCTGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 54535-54768 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV798318.1 Lactobacillus sp. HMSC068B07 Scaffold186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 54535 36 100.0 30 .................................... AGCAGACGGTTATATTTTAAAAGTCAGTGA 54601 36 97.2 30 ....................T............... TCGGTGTCGGTGTCGTCCTTATGCAACAAC 54667 36 100.0 30 .................................... TTACAATGAAGCTCAAAAGTGACGTATTTC 54733 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 99.3 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : ATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACCCTAGGCCGCCCTTGAGCAACCGGTTCACCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACCCGCCTTTTTCATGTTATCAATAACCGCGTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACACAATACCCCGCCATATCCCCCTTAATGTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAACCGTTTCGATTTCCTTGCAAAAGAGACG # Right flank : CGTATGGTGCCGGCGATACAACTGGTCGCTGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTCAAGTCACTCGGCCATGTATTGACAACCCGTCTCAGGTAGATGTCAGATCAAAAAACCTTCAGTGAAGACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAACGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTACATGTACCAACAGGCGTTCAAATCCCTTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTTGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //