Array 1 6686-3972 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALCB01000110.1 Actinomyces sp. ICM39 contig00090, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6685 29 96.6 32 ................T............ GTTGGTGACGGTGAACAGGTCGCCGTTGGTGA 6624 29 100.0 32 ............................. TTGCAGGTTCAGGTTGATGCGCAGGCTCAGGT 6563 29 96.6 32 ........G.................... CAGTCAGCCACAGCAGCAATTACGCTATAAAT 6502 29 96.6 32 .........................A... TTCACCAACGGGCACCCTAACGGAGAGAACCC 6441 29 96.6 32 .........................A... CTTTCTTAGTTCACTCCGGCGACCTGGAGGAA 6380 29 96.6 32 .....T....................... GGCGCGGGTGTGCAGGTGGTGATCCCCAATGC 6319 29 96.6 32 ................T............ GGCTTCATCAAGCCGGAACTCGCCGGCCCCAT 6258 29 96.6 32 ................T............ ACCCGCATCCTTGGCAACCGCCTGGGCTTTTC 6197 29 89.7 32 ................T........A..G AAAGCGCCGGCGACCTTTTCGCCACGGTTGCT 6136 29 93.1 32 ..........T.....T............ GGCGACGTGCCGTTACCGTCGCCGCCCTTGTT 6075 29 93.1 32 ................T...........T AGCCCGTCGAAGGTGTTCCGTCGTTTTGGCGA 6014 29 100.0 32 ............................. TGGGAGAGGCCTGTGGCTCCGGCCGGGCTGGT 5953 29 100.0 32 ............................. CCAGCCCCCGACCGTATCCCCGGCACCTGGCT 5892 29 93.1 32 ................T...C........ TCAGCCAGCGAGTTCCCCTACAAGCTCTCTAA 5831 29 100.0 32 ............................. AGGACCGACGCCAAGACCGCCGAAGCCGCCGC 5770 29 96.6 32 .....T....................... TGACCGTCCGCACCGGGCGCCTGTCCGTCAAA 5709 29 93.1 32 ................T....G....... GCTGCGCTCGCGTCAATGCAGCGCGGCCTCAC 5648 29 93.1 32 ................T...........G CCGATAGCCGTGCTAACGCCGCTCGAGATCGC 5587 29 100.0 32 ............................. TTCCTCTACGGTTCCTTCGACCGTTACCTGGG 5526 29 86.2 32 ........T...CA..T............ TCCGCGTAGCACCACGGGGTAACGACGTAAGT 5465 29 93.1 32 ............C...............G GGCGCGAAGGTCGTCATGGCGGTGATGGACCA 5404 29 89.7 32 ..C....T....................G TACTGGCCGACCGGTGGGAAGGATCATGCAAC 5343 29 93.1 32 ........T.......T............ CTCCTCGACATCTCCCTCCGAGGTATGGCTAT 5282 29 100.0 32 ............................. ACGAGCGAGCGGGTCGGCCAGTGAATAAGGCG 5221 29 100.0 32 ............................. GGCGGCACGATCACGATCAACGCCGTCAACGA 5160 29 100.0 32 ............................. GTGGTGGGTGAAGGCACCTGTCCCTTCGCTCT 5099 29 100.0 32 ............................. TGGAACCAGCTGGCGGACGCGATCCCCGGAGC 5038 29 93.1 32 .......G........T............ ACCGTGCGAGCCACCGCACGCCACGGAAACAC 4977 29 96.6 32 ............................G AAGCGGCAGGCCGAGCCCGCTGAGACGGGCAC 4916 29 93.1 32 ...G....T.................... GTGACCCCGACGTGGACACAGTCATCGGGGAA 4855 29 100.0 32 ............................. CCGTAGATGATGCGTTCCAGGGCTTGGGTTTT 4794 29 86.2 32 A..........A...A............G GGAAGTGGATGCTATGGCATCGAAAGCAATCA 4733 29 96.6 32 ....C........................ TCGACCGGGCCAGTAATCGGCGGAATCTCACC 4672 29 96.6 32 ............................T ACGTGGCAGACGATCCGACGCGCGGTCGCCGG 4611 29 96.6 32 ................T............ TGGCTCTGGAACGGCACGTAGAAGTTCGATGC 4550 29 100.0 32 ............................. GTGTGGGACTTGGTGAAGAATCTGGACAAGAT 4489 29 89.7 32 .......T..T.....T............ GCCTTCATGTCCGAGGACTCGGTCTCGATGGG 4428 29 89.7 32 .............A..T...........T CCGAGCGTGATCGGCTCGGTTGACGAGATCGT 4367 29 96.6 32 ................T............ AGGTTGTCGGCGTAGCGTTGTACGTGGGTGAG 4306 29 96.6 32 .........................T... GGCATCCTCGTGAAGGCCGGGAGCCTCGCATT 4245 29 93.1 32 .........................T..G GGTGATCCTGGTGAGGCGATCACAGTCGTGAC 4184 29 93.1 32 .........................T..G GGAGGCAAAGCGCGGATAGTGCCCCTCGCCGC 4123 29 100.0 32 ............................. CAGGCCACCAGAAAGAGCCCGCCGATCTTGAG 4062 29 96.6 33 .............A............... GACTACATCGACACCTTGCGTATCGCACGCAAG 4000 29 89.7 0 ........T.......T........T... | ========== ====== ====== ====== ============================= ================================= ================== 45 29 95.4 32 GTTTTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : CGTCGACGACTTGCGACTGTGGGATGACCGCGAGGGCACAGTTGCCGCGGGCGTGGCGTATGAGGAGAGTGGATCCTGGTGATCGTCCTCGTTTTGTCTGCCGTGCCTGAAGGTTTGCGGGGGCACGTGACTCGGTGGTTGATGGAAATCTCGCCGGGGTATTCGTGGGGACGCTGTCCGCACGGGTCCGTGAGCGCCTGTGGGATATCGTCACCGAGAACATGAAGACCGGGCGTGCTGTCATGGTCTACCGTGCACGAAACGAACAGGGGCTCGAGTTCTTGACGTGGGGAGACCCCTGGAAGCCCGTCGACTTCGATGGGCTGACGCTCATGATGCGTCCCTACTACTCCGGAGGCCGAGGTCAATACTCCGAACCTGACCCCGCAGCGCGTCAGTTGCGTAAGCGTCCCGCGATGAGTAACTTTCAGAAAAGGCGTAAAGCTCAAGGCTTTCCAAGATCTGACCGATCTGAGCAATAAAAATGCAGGTCAGGAAGT # Right flank : CTCGGTGGCCGTCAGAAGGTTTACGCGATGGTTCGTTGACCCGCATGACTGAGCCCCGACCTCGTCGATACGAGGCCGGGGCTCAGTGCGTCAGATCCGTACCCTCACGTGGAGGGCAGGACGGTCAGGCCTGGCGTCGGCGAGCCGCCACCGCCAGCGCGCCCAGCAGACCCAGCATGCCGGCACCAGCGAGGACGCCAGCCATGTCTGCGCCCGTGCGAGCCAGCTGCTTCGGCGCGGGAGTCGACGGAGCGGGCGGCGTGGCCGGGGGAGTGGACGAGCTCGGCGTCGAGGGTGCCGACGGGGTCGGCGTCGCCGAAGGAGTCGGGGTGGTCGACGGCGTCGGCTCGGGAGTGGGCGTCACCGACGGGGTGGGCGTGGAAGACGGGGTAGGCGTCGGGGTTGCGGTCGGCGTCGGAGACGGGGTCACGGACGGGGTTGGGCTCGGCTCCGGCGTGGGAGTCGTGGAAGGAGTTGGCTCCGGCGTGGGAGTCGGCTCC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //