Array 1 558399-560503 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNLR01000002.1 Citrobacter sp. JL976 AMD976_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 558399 29 100.0 32 ............................. TTTAATCGGTGCAGCCGTGCGACCGCGCTCGG 558460 29 100.0 32 ............................. AAATGAATATAATGGCGTCAAATAATAAAGAC 558521 29 100.0 32 ............................. TCTTACTCTCCCTGTGCGTGTACTTACCCCCA 558582 29 96.6 32 ............................C GGATCGCGCAGCCGGTTACGGCTCACGACTGC 558643 29 100.0 32 ............................. TCGGAGTTCGCTCGCAAGAACGAGCGGGCAAT 558704 29 100.0 32 ............................. GCACGATGGTCGCCGTGACCGTCGTCGTGCGG 558765 29 100.0 32 ............................. TGGTTGAATTCATTTGTACTAACGAGACTTCA 558826 29 100.0 32 ............................. AGTTGAAAACGGAGATTTACGCAGAGTTATTG 558887 29 100.0 32 ............................. AGCGCGCGTGGTACCAATGCCGCCGATTACCA 558948 29 100.0 32 ............................. CTCGGGCTTCCCATCGGGGCCATGTCCCGGAT 559009 29 100.0 32 ............................. CGTTGCCCTCCCGCTGGAGGGCGTAAGATCAG 559070 29 100.0 32 ............................. CATCGGCGATATTCCCGGGCCGCTGTCTCTCA 559131 29 100.0 32 ............................. GCTAAAATCATATACCCCGGGAGTGCGGGACA 559192 29 100.0 32 ............................. TTGTAACGGGGAAATTAGGCTCGGGTAAAACT 559253 29 100.0 32 ............................. CGATCGAGTCTGTTTTACTAATGGCCTCAACA 559314 29 100.0 32 ............................. ACTGGTGCGCACAATTTTCGCGCACGCCGGGT 559375 29 100.0 32 ............................. CACCTCATGCAACTCGGCCAGATCCGCCTCCA 559436 29 100.0 32 ............................. CGCAACCTGACAGGTGGCGATTATGACGACGA 559497 29 100.0 32 ............................. AATATCGAGCTAGTTTGCCTACACTGATTGAA 559558 29 100.0 32 ............................. CCATCTGGCGCTGGATTTTGAAGCGTCCGTCA 559619 29 100.0 32 ............................. GTCAACGGCGGAGAATCTGCCAGCACAGCCGG 559680 29 96.6 32 ............................T TTGCCTGAAATTATCGCAATCAGAATTTTTGA 559741 29 100.0 32 ............................. GAACACCGAAGTAGCGGAGCAGTTAACCGCTA 559802 29 100.0 32 ............................. CAACGTATGGACATTGCCAGCATCCTGCAATC 559863 29 100.0 32 ............................. ACTTGAGCTTGGGAATTATTGCTCCGGTTGTT 559924 29 100.0 32 ............................. GCAGTACCCGTTATGCGCTGGATTGGCAAACG 559985 29 96.6 33 ............................A TCAACAGCACATTGCAGCGCGAAGGCTTCCAGC 560047 29 100.0 32 ............................. CCAAGAAGCTAAAGCCGGCACCAGACGCAAAC 560108 29 100.0 33 ............................. CCGCAGAGAAGCGCATAGCAGAACTGGAGGCGC 560170 29 100.0 32 ............................. GGGCTTGGGTCCCTGGCTTACGGGGAAAAAGC 560231 29 96.6 32 .......T..................... GCCACGCCGTTCGGGTCGATTTTGAGCGAAAT 560292 29 96.6 32 .......T..................... GCCACGCCGTTCGGGTCGATTTTGAGCGAAAT 560353 29 96.6 32 ................G............ GCGCGTACGCTCAGGTGTTCACTGATTGGCGG 560414 29 100.0 32 ............................. CCAGAGGTTCTGATGGTATCCGAAACCATGTC 560475 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTTGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //