Array 1 393502-390649 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNKC01000005.1 Bifidobacterium adolescentis strain 70B Contig_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 393501 36 100.0 37 .................................... GAGCGTGGAAGTAGTCGCGGCACCTCTCGACCTGGAG 393428 36 100.0 37 .................................... ATGACGCCGGACTCCCTTCCGGGTGCCGCGTGTGCGA 393355 36 100.0 35 .................................... CGCCCAGAGGTCGAGCTTGACGAGGAGACGCGGGC 393284 36 100.0 41 .................................... TCATCCAAACGCAAGGACTGCCATTTCAGGTTAAGAAAGGA 393207 36 100.0 38 .................................... TCGCCTCGAAGATCATCGAACCGGACAGGAACAACGAT 393133 36 100.0 35 .................................... GCGACGAAAAATCAGTTCCGCTGCGCCGGAGTGCA 393062 36 100.0 38 .................................... TCTAGAGATAAACAAAAACGACTGAAAGTAAATAGAAA 392988 36 100.0 37 .................................... TAGTTCAATCCGCGTATGACGCGCGCAGGCCCAGTTC 392915 36 100.0 36 .................................... AAGGTGCATCTTGACGCGGTGCCAAGCGACCAAACA 392843 36 100.0 36 .................................... CAAGGTGTTCTATTATGTCGACGGTGAAACCGATCC 392771 36 100.0 36 .................................... TGTGGTACAGATCAATGGAAGCAGCTCATAGAGAAG 392699 36 100.0 35 .................................... TGTAGGCGCTGTTTGCCAACGCCAAAGCACTGCCG 392628 36 100.0 35 .................................... TACACCAAACATAATGTCTCCTACATCATGCCAAA 392557 36 100.0 35 .................................... TGCAGGATTGGCGTAACACCATGCTCAATATTGAC 392486 36 100.0 36 .................................... GGGACGTTCGCCTTGTCGATGTTGAACGCGGCGGCC 392414 36 100.0 34 .................................... TAGCATAAGCTGGACGGCTCCTTTACGATACCGC 392344 36 100.0 36 .................................... CCAATATTTTGGGGAGTCTTGGCACTGCCATTGGTG 392272 36 100.0 34 .................................... GGCCACACGCGTACTGCCAATGAGCATTAATGTT 392202 36 100.0 36 .................................... GTAATAAGGTATACGACACAATGACGCACATACGTA 392130 36 100.0 34 .................................... ATAATTGCGAAGCCGTCATGTCAGGAAAACTCAA 392060 36 100.0 36 .................................... CGTACATTATCGGCTAAACTGGCCGAAGAGGGGTAT 391988 36 100.0 37 .................................... TCACAAGGATGCAGTAACCAACGCACCAATCGGCAAA 391915 36 100.0 39 .................................... GAGTGGCTTTGCAAGAGTGCTAGCGGCGTCTTTACCGAA 391840 36 100.0 36 .................................... CAGCGAAATTATGAACGCGCCGATTCTGTCCGACCG 391768 36 100.0 35 .................................... GCGCAACTGCGCTGTGACCGCTGGGCACAACGGCG 391697 36 100.0 35 .................................... GAGGAGAAGCAGCGCGAACGTGTGCGCAAGGCCTT 391626 36 100.0 37 .................................... GGCGGCCATTTCAGCGCCCATGTTGGCGATGACGTTC 391553 36 100.0 36 .................................... TCTGTTGACACGTAACGCTCCGTGGAATTTCGTGAT 391481 36 100.0 36 .................................... AACGATCTGGCGAAGCGTGTCAATGCTCTTGTGACT 391409 36 100.0 37 .................................... GGCATGACCCTGCGCACCTACAAGGACGTCGCCGCAG 391336 36 100.0 37 .................................... TTCACTCCAATTCACTGCAAATCACGTCATTTCTCTA 391263 36 100.0 37 .................................... GTCCGCGGATTGACGCCGCCAAGCTGCGGCAGGTGCG 391190 36 100.0 37 .................................... GGAAACCGGGCACTCCGTCGCGGACGTGCGAGAGGCC 391117 36 100.0 36 .................................... ACGGGCGAGATACCCGAGTCCATACCCGAAGGCATC 391045 36 100.0 39 .................................... CAACCATGTTCCCAGAACTGACGTGGAAAAACTATGCGA 390970 36 100.0 36 .................................... TTGGAGGACCGGCAATGATCCACCTCGCCATCGCTG 390898 36 100.0 36 .................................... GACATCTCGAACTGGCAGTGCGGCATCGACACCGCG 390826 36 100.0 35 .................................... CCGAACCACGACTATCCGGACGACGCGCTTCGGAC 390755 36 100.0 35 .................................... CCCGGCGACATGCCAAGCGAAGTGCCGAACCAAAG 390684 36 88.9 0 .........T......A...G...T........... | ========== ====== ====== ====== ==================================== ========================================= ================== 40 36 99.7 36 ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA # Left flank : ATCTGGTGGCATATGATATCAGCGATGATTGCTGCCGCTCACATGTTGCGAAAATTCTTCAACACTATGGAGAGCGATTGCAATATAGCGTCTTCTTACTGCGGGTACGTCCTTCGATGATGTTGGATGTCCGTATGCAGATAGAGAGGGAAATAGATGACTCAATCGATTCTGTTGTGTTTTGTTCTCTTGGAATCATTTCTCAAACGGAAGAGGGCTTGGATTTCTTGGGGCGCCGTGGATACGTCGATTTAGAGATACCGACAGTGATTTGAAGTTTTAGCCTAATGGTGATGTTGTTTGATAAGTAAAGAGTGTTTTGCTGTTTTTCAAGTGCGAGAGATGCATCATTGCTGCGACACACGGTGAGCGCTCGCACTTGAAAAATAGTTGTTTTGGAGCCAGTGAACTTATATTGCTTCTGTATTGCGATAGAAATGAAAGAGTCGCTCGCAAAAGCCTTTAGAATATGTGTCATTGTAAGGTCTTAGACTATGACT # Right flank : GCTATGGGCGAAGAAGCGCAACCGTCTCCAGTTTTTTAGATTAAAGCCAATATTCAGAGGTCTATCCAAAATCGCTGGATGATACTGTCTTCGTTCCGTCCCGTATCGTTCACGATTTCATTCTCCATCTTTCCACCATTGCTGATAATCGTCCGTCTTGATGCTTCATTGCTCTTGTGACAGGTAAGTAGAACACGTTGCTCGCCCTGCTCTTTGCAGATGGGCAGGAGTAAGGCGAGCATCGCTTTGGCATACCCTTTTTGACGTTCCGATGGCAAAATGCTATACCCAATATTTCCTCCGTATTGCAGCAGAAAAGGGGATAGCGGACGTCTGAAATCAATGATGCCGACGAGCTTGTCATCCGCCTTCCGAATAGCTAAAAATACTTCCGACGGCACATAGCCTTCGCCGTATTTCTTTTTCAATCGATTATCGAAATCGATCCATTCATCAAAAGAATCCGTGTCTTCGAGACCGGCGCATCCATCGAGACTGTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCATTCAAGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //