Array 1 1038-96 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADCXN010000061.1 Candidatus Methylobacter favarea isolate METHB21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1037 32 100.0 33 ................................ AGGCGCAGGCGCTGGCCAGCGCCGGCCTGCTCA 972 32 100.0 32 ................................ AGATAGCCCTGGCTCTGCCGCCAGATCAGCTG 908 32 100.0 32 ................................ TTTGTCATCTATCAGTTTGAGCATCCTGCAAA 844 32 100.0 32 ................................ CTGCCGAATTCGGCGCTCGGCCACGACCTGAT 780 32 100.0 33 ................................ CACTCCCGGGCTTGGGAAAATGTCCACCGGGGG 715 32 100.0 33 ................................ GCTATCGGTCTCGGTCTTGCCGGCCGGGTCAAA 650 32 100.0 35 ................................ GAGGTTCGGCTGGGTGGCCATATAGACCATCGGCG 583 32 100.0 32 ................................ TGGTATCGGCAATCTTCGCATGTAGTTTTGCT 519 32 100.0 35 ................................ ATGATCTACCTGCTTGAATACAACACCGCCAAAGC 452 32 100.0 33 ................................ AGATTACGCCGCGTTATAAAAAGGAAAGACATC 387 32 100.0 33 ................................ CAGGGCGCATGGCCGGCGCTAAAGCGTCCGTCG 322 32 100.0 32 ................................ TTTGAAGCGAGCCGGCTTTGCTCCGCGTAATA 258 32 100.0 32 ................................ AATTATGATTGTCTTCTTTCAGTTCCTCCCCC 194 32 100.0 35 ................................ TGCTGAAGACGTGCCCGATCCGATCAAGGACGCGA 127 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 15 32 100.0 33 GTCGCGCCCCGCGCGGGCGCGTGGATTGAAAC # Left flank : CGTTTTTGTGGAAATAATCAGGAGAAGTCAACATGTTGATTCTGGTAACCTATGATGTCAGCTTTAAAAACCAAACCGGACCAAAACGCCTGCGGAGAATAGCGAAGCTATGCCAGGTCTTTGGGCAGCGCGTACAGTATTCGGTTTTTGAAGTGGAGGTTGATAGGGCGCAGTGGACCTTATTAAAAAATGATTTAATCAAAGCAATGGATGAAGAGGAGGACAGTTTACGATTTTATTACCTGGGCAATAACTGGAAACGCCGGGTTGAGCATATAGGCGCAAAAAAAGTATTGGATTTAAATGGACTGTTACTGGTGTGATGCGAACACCAAGCTGACATAAAAAACGCATAGCTTTCGCAACCATCATAACATACTGATTAGTATGTCTTTTTATAGTTAGTCTTGATTGAATTATAATGTTTATCGCACTTGCTTTAATTGATTCGCAGCTAAAGGAGTATTTGGCTTTTAAATTCAATCAGTTAGGCAAAGGCA # Right flank : CACAGATGCCATTTATGTATGAAATGGGCAAGAGTTAAATAAATGAAATCAGGAAGCAACACCCTTATTCTTCATGAGAGAATAAGGGTGTTGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGCGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.10,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 37668-37434 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADCXN010000001.1 Candidatus Methylobacter favarea isolate METHB21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 37667 36 100.0 30 .................................... GATGCGGTTTCTTTTGTTACTGAACTCATG 37601 36 100.0 30 .................................... ACCGGCCACCTGCGCCTGTATCTGCGTCTT 37535 36 100.0 30 .................................... CTCACACTCAAGCAAGAAAGGTTCTGTGTG 37469 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTGTGATTTGCAGGTAGGCTATAGTTGGTTACACT # Left flank : TAAACCTTAATGTCCTGAAGAGTTTACAGAGCCGAAAATATATTAATAACAATTCCTCGGATAAGGAGAATAATTATGAAACTACTACCCCTTTGCCTGACCTTTCTTTTTAGTACCTTGGCACCAAACCGTATAGTGGCCTTACCTCTTCCAGATACTCATGATGTGAAGCAAGCCCGATTTTTACCAACAACTGCGGATCAAATGAAAAATTCCATAATAATAGCAAGTTTATTGGCAACCAAAAATAGTTCCGGAAGCGCGAGCACAGGGACAGGGTCAGGGGAGGGACTCCCTGAATCCGCTGGCAATTCAGAACGGATAGGCGCAGGCACTGGCAGCAGTATAGTAAAACGCTTTCACGAATCCAAAAGATTGGGCGTAGGAACAGGTGGAGGTTATCTCGAGACTGGCTATAAGACTGAACGTTTAGGTGTAGGAACGGGTAGCAAGCCAAAGCCAAGCAGTAAGGGAAATAGTGATGAAAATTACTAGGCGAT # Right flank : TGCCTTATGCTAATAACTTGATTTTAAAGAATAAGCTGTCACTTTTGTGGTTAAAAAAGTGACAGTTGATCCGGTGCTTGTTCAATCTTCTTGTGTTTTTTGCCATAAAAAACCTCAATTCTGCCAAACTGTTTATCGGTTATCTTAATAATTCGAACTTCGCCATCTGGCGGTAAACGGGATTTTATCCGTTTTGCATGGACTTGTGCATTTTCGTCACTCGCGCTGTGGCGCATATAAACTGAATACTGCATCATACCAAACCCATTATCAAGCAGATGTTTTCTGAAAACTGTGTATTGTTTTCTGGCTTGCGGGGTGTCCGTTGGAAGATCAAAGATGACAATCACCCACACTGAGTTTAATCCGCCAAAGCTCATGGCTGCCGCTGGCTAATTATTTTCGGATAATCCAGCATAATGGTATTGTCTTCATAAGCGCGTTTAAGATTAGCCAACATATAATGACAGGCAACCATTAAGGGCATATTTTGTTTATCC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCAGGTAGGCTATAGTTGGTTACACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //