Array 1 3902512-3901263 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACYGN010000008.1 Escherichia coli strain CPE4 ctg.s1.000000F.arrow, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   3902511	    29	 100.0	    32	.............................	GTGACCATAAGGGCATTTCATACTGCCTTGCT	
   3902450	    29	 100.0	    32	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTC	
   3902389	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC	
   3902328	    29	 100.0	    32	.............................	AAATTAATTTCGAAACGGGCGTTGATGGTGAA	
   3902267	    29	 100.0	    32	.............................	GCTGGCGCACCTTACGCAAAAATAGACGTAAA	
   3902206	    29	 100.0	    32	.............................	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG	
   3902145	    29	 100.0	    32	.............................	GGGTTCTATTTCCTCGGGATTTGCCGACACGC	
   3902084	    29	 100.0	    32	.............................	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG	
   3902023	    29	 100.0	    32	.............................	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA	
   3901962	    29	 100.0	    32	.............................	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG	
   3901901	    29	 100.0	    32	.............................	TTGGTATTAACGGGAATGTAGTCACTCCAGGA	
   3901840	    29	 100.0	    32	.............................	GCGATCGTATTTTCCGCTACGTCGCTCAAATG	
   3901779	    29	 100.0	    32	.............................	ACGACTGAATCCGGCGAGGCTATCAACTGGCC	
   3901718	    29	 100.0	    32	.............................	CCGCACACGTCGAGCTGGTGGGGATTAATGCT	
   3901657	    29	 100.0	    32	.............................	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA	
   3901596	    29	  96.6	    32	............................C	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC	
   3901535	    29	 100.0	    32	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC	
   3901474	    29	  96.6	    32	........C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA	
   3901413	    29	  96.6	    32	........C....................	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT	
   3901352	    29	  96.6	    32	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCGC	
   3901291	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        21	    29	  99.4	    32	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.80,-11.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//