Array 1 119621-115053 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJS01000001.1 Schleiferia thermophila strain DSM 21410 Ga0244498_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ========================================================================= ================== 119620 46 100.0 30 .............................................. TTTTGCTATCCAGTTGAGCAAACACCCGCA 119544 46 100.0 30 .............................................. CCGCACCTACGCCTACCGCAACGCAGTGTA 119468 46 100.0 30 .............................................. CATCGTAAGCTTCTTTTACTTTTTCTTTAT 119392 46 100.0 30 .............................................. GTTGAGGTTCAGCTTATAAAAGAGCTGGAA 119316 46 100.0 30 .............................................. CGAATTTATGGAAGGAGTCGTTTGGTGGTG 119240 46 100.0 30 .............................................. TATGCGCACAGTTAAAATACGGGTGGCCAG 119164 46 100.0 29 .............................................. GATGGAGATAAGCGAGTACCGAGTGTTAT 119089 46 100.0 30 .............................................. GTGCCATGATTAATAAATACGAATTTCCGA 119013 46 100.0 30 .............................................. CCAACGTGATAGCTTAGACTGCCGCTCACA 118937 46 100.0 30 .............................................. CTTTCGAGCGCTCAGGGAAAGATGGCCAGA 118861 46 100.0 30 .............................................. ACAAGTCGTCGTAGTAGTCGCTTAATGGAG 118785 46 100.0 30 .............................................. AAACAACGATTACTTCGAAAGCGTTTCAAA 118709 46 100.0 30 .............................................. CTCTGCCGTCAATAGGGTCAAGTGCCATGT 118633 46 100.0 30 .............................................. CTAACCTATGAGCAGATAGCTGATGGAGGC 118557 46 100.0 30 .............................................. CTAAAGTCGGAATACGATCTTTACGTAAAA 118481 46 100.0 30 .............................................. TGTCTGCCTGCGGTCTATTCGTCCACCAGT 118405 46 100.0 30 .............................................. CAATAATTGCAGTATCCCCTTTTTCTTTAC 118329 46 100.0 30 .............................................. CCTGCCTGCACAAAGTAGTAAAAATCATCG 118253 46 100.0 30 .............................................. AAAAAGGATGCTTATCTTTGTTTTGTAATT 118177 46 100.0 30 .............................................. ACACTAAGCACATTTAAAGCTCCTTTTATG 118101 46 100.0 30 .............................................. ATCTCGCCAAAACTCCTGATTGAACTGCTC 118025 46 100.0 30 .............................................. TAAGAAGCAATCACTTAAAAACAGAAAAAA 117949 46 100.0 30 .............................................. TATGTCCAGGCTGATACGTAAGCCAGAGCA 117873 46 100.0 30 .............................................. TGTTTCTGAGGTTGTGGAAAAGGAACACAA 117797 46 100.0 29 .............................................. TAGGACGAAAACGTAAAGAGATGTGAAGA 117722 46 100.0 30 .............................................. AACGTCCTGAATTTCATACGATTCGCCATC 117646 46 100.0 29 .............................................. ACATTGAGGCGTACGAGGTGCTTAAATTA 117571 46 100.0 29 .............................................. CTATTATTGCGAGTTTGGAGTACCCAGAA 117496 46 100.0 30 .............................................. GGGTGGCCAGCAATTTAGTGGCCAGTAACT 117420 46 100.0 30 .............................................. TTTGTAAATCCAGTGCGACTTATGCGACGG 117344 46 100.0 30 .............................................. CGCATATTGTTTTGCGTGAGAAAGCGTTGG 117268 46 100.0 30 .............................................. TTAGGTTGACGCCTAAAAAAACACATTCTT 117192 46 100.0 30 .............................................. GAAAAAGTTTAGGTAAATTACCTACAAAAC 117116 46 100.0 30 .............................................. CCAGCGAAGGTACTTCTTCTGCTTCGTCAA 117040 46 100.0 30 .............................................. ACCGGGCAATGCAAGAGCGCAATCGGCAGA 116964 46 100.0 30 .............................................. AGCCAAATTGAGGAGCTGCAAACCGACAAG 116888 46 100.0 30 .............................................. ATAGAAAGGTCGAGCCGGTAAGGCTTTCTG 116812 46 100.0 30 .............................................. AGTCGCTTGTCTCTGTGCCTGGTCCATCAA 116736 46 97.8 30 ..................G........................... GATTTACATCATCCTGTTTCGGATTTATTT 116660 46 97.8 30 ..................G........................... TCAAAGGCTTTGCGCTGCTATTAACCCGGT 116584 46 97.8 30 ..................G........................... AAGTCATCAGGGTAGAAAGGATGTCTTTTT 116508 46 97.8 31 ..................G........................... CGGATATTGAAAAGTTCAAAGTCAGAGCCGA 116431 46 97.8 30 ..................G........................... AAAAAAGAGGGGAAAAATAAAGCAGCACCA 116355 46 97.8 30 ..................G........................... TCTTGAGAATATAACGTTTGACGGCAGGGA 116279 46 97.8 30 ..................G........................... ACTTCAAGAGTTGCATGAAAACGGCACTCC 116203 46 97.8 30 ..................G........................... CCAATATGGCATTCATCCACAATAAGATAG 116127 46 97.8 30 ..................G........................... CGATAACACATTTAACCCTGAAGGGATAAG 116051 46 97.8 29 ..................G........................... TCTATTATTTCTTTTAGCAGCAATATAGC 115976 46 97.8 30 ..................G........................... GTATGGTTTAATTTTTGTTAAATCTCTCAT 115900 46 97.8 30 ..................G........................... GAAGACACCGTACGACTATTTCTCGGAAAC 115824 46 97.8 30 ..................G........................... ACTCATGGCGCAGCCTACTTTCCGCGAAGG 115748 46 97.8 30 ..................G........................... AGTCGCTTGTCTCTGTGCCTGGTCCATCAA 115672 46 97.8 30 ..................G........................... GATTTACATCATCCTGTTTCGGATTTATTT 115596 46 97.8 73 ..................G........................... TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 115477 46 41.3 30 NNNNNNNNNNNNNNNNNNNNNNNNNNN................... GATTTACATCATCCTGTTTCGGATTTATTT 115401 46 97.8 30 ..................G........................... TTGAACAACAAAGATATGTAGGCCTTCATT 115325 46 97.8 30 ..................G........................... TTCCGGCAACTATATCATCCCTACCAATTG 115249 46 100.0 29 .............................................. ACAGCGATAATGCCGCTATGTTCTTTTAA 115174 46 100.0 30 .............................................. AGAACTATGAGTGCACTTGAAAAAAAATGG 115098 46 91.3 0 ......................................G.A.TT.. | ========== ====== ====== ====== ============================================== ========================================================================= ================== 60 46 98.2 31 AATGTCAATGAGCCAAAAATACTAAAAATTGAAAGGAAATCACAAC # Left flank : CAAAAAAATACTTTATCCAAACCTGGAATAACACTGAAATCGAATATGAAAACCCGCTTAAACGCTTACCGAATTATGTGGTTGTTTGTGTATTTCGACCTTCCCACCCAAACCAAACAAGACAAGAAAGCCTATGCCCAATTTCGAAAAGAATTGCTCTTCGACGGCTTTATGATGATTCAATATTCTATCTATGCCAGGCACTGTGCCAGTCGCGAAAACCTTGAGGTACACAAAAAGCGAGTTAAATCCGTAATTCCGGAAAAGGGCAACGTCATCTTGTTTGAGATCACAGACAAGCAGTTTGGGATGATGGAGTTTTATACCGGAAAAACAAAGCCGAAAAAAACACCTGACCAACGAATCATTCAGTTGGAATTGGAGTTGTTTTGATGCAAAAAATCACATAAAATCAAAAAAAAGAGGGTTGATCACCCTCGTTTTTTGATTGCACAACAAGTTGTATTTACCTGGTTATGCGATCTTTAGAGGCTCTTCTA # Right flank : TTTAACAATCCAAGTACCTTATAGAATATTGTGACAATAACATTTTAACATTTTATACAATAGATTTGATGTTTAATTAATCCCTTAAGAAAACAAATATGTTTTAAAATTTCCATATTAATTCACCATCAGGTTTAATTTCAAAATCAATTCGTTCGAAAACACAATTTAATTTTCGTGCTTTTAATTTTAAACGATATTGATATTTTGATACATCAAATTCAGTATAACCATCTTTTCCATGTGAAAGTTTTTGAAATTCGTCATCTATTCTTGCGTCAATGTGATTTTGTAAATAAATATAAGGTGAACCTATTTCATTAAATTTATAAACAATGAAAACTCTATTTTGCAATTCGTTTGATTTAAGTTCTTTCAATTCCTCCTTGTTTTTTTCATAAAATATTACCTTGTAACCTACTTTTATTATAGCCCTTAAAGGTAAACCAAGTAATTGATTTAGTTCATTTTCCTTCCAAATTTTTTTTATTGAAATACCG # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATGTCAATGAGCCAAAAATACTAAAAATTGAAAGGAAATCACAAC # Alternate repeat : AATGTCAATGAGCCAAAAGTACTAAAAATTGAAAGGAAATCACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [31-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //