Array 1 18003-17194 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNTW01000009.1 Enterobacter hormaechei strain 2485STDY5438435, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18002 28 100.0 32 ............................ ATTTTCCGGAAGGGGAATAAAATTCTTCTTTT 17942 28 100.0 32 ............................ ATAAGCCTCCTGCTGGGGCTGGCGTTGCCGGT 17882 28 100.0 33 ............................ GGTGATGTGAGACAGAAATGGGACACACAAAGC 17821 28 100.0 32 ............................ GGTATATTCAGCCTCCCCCGTCACCACTTCAA 17761 28 100.0 32 ............................ GTCACCAGATTCCGATGACCAGACGATAATCG 17701 28 100.0 32 ............................ TGGCTCGCCAGCTCGATGGCCTCAAAAGCAAA 17641 28 100.0 32 ............................ GATGAGCTCGGTTCTATTCCGTATTCGTCAAT 17581 28 100.0 32 ............................ CCAATGAACAGCGCAAAGGGCCTGAGCACTGT 17521 28 100.0 32 ............................ TCGACGAAAAGAGGGGTCTACGCGACCCCCAA 17461 28 100.0 32 ............................ TTCGTCGTGCAGCTGGCGCATCTCGCTCTCAA 17401 28 100.0 32 ............................ TGTACCGGCACCAGACCGCTGTTTAGCAGAAC 17341 28 96.4 32 ..................T......... CTGCGCGCGAAGTTTCATTTAAGATGCAAATT 17281 28 100.0 32 ............................ AAGTCGGCCTGTCCTCCTGCTCCGTAACGCCA 17221 28 89.3 0 ..........TA.G.............. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTACTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGGATGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTGATTTTTGCCCAGAATGTAATGTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : TCATCGAGTGTAAGGCTGTGTGATTTTATTGTGCGCACCACCGTACAACCAACACAAAACCCGAAACAAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 28407-27476 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNTW01000009.1 Enterobacter hormaechei strain 2485STDY5438435, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28406 28 96.4 33 ............A............... ATGATTAGTCAGATTGAATGACAATGCCTTAAA 28345 28 96.4 32 ............A............... GCAAACCCCAAATCAGTTTCGAGCACCCTGCC 28285 28 96.4 32 ............A............... TGCAAGCTGTCGTAATGCGCCAGCGCTACGGG 28225 28 96.4 32 ............A............... AGCGCATCAACCGACAATAGCCAGGTAACGGA 28165 28 96.4 32 ............A............... CCCGCAAACCTCCGACAAAAACGCTTCAAGAT 28105 28 100.0 32 ............................ TACTTTGACAACGTCGAAGACCAGGTCAGAAA 28045 28 100.0 32 ............................ TGACGCAATGCCGACACACCCGCGTGGCACAG 27985 28 100.0 33 ............................ TGGCGGCGAAGCGGCAGCAAAGGAACTTCTTAA 27924 28 100.0 32 ............................ AGCAATCAGCAAGAAAAAATATTGGCATTGAT 27864 28 100.0 32 ............................ TTCAAGCGCAAAGACCATTGCGCCCGTCTCGT 27804 28 100.0 33 ............................ GGAAAAAGTAGCTGCCGCACAGCAAAAAGCCAC 27743 28 100.0 32 ............................ TTCACCAGCTACGGACTACGTTGAGCGCCAGC 27683 28 100.0 32 ............................ ATGGCGATACGGTTGTTAGCGTCTCGGGTGTT 27623 28 100.0 32 ............................ ACATTAAGCCCGCTCAATATGAGGCGGAAATA 27563 28 92.9 32 ............A........G...... ATTTGTCTTGCTGGATGTTAGTTACTGAGCAC 27503 28 78.6 0 ......C..............A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 16 28 97.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGACGGAACGGCTGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTGAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCACCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAGTTCATATCATTAATTAAGTTTAGTCTCGTGCGTCGGGGAAGGGACTCCGGCGGGGTATGGCGAAACCCTTTTTTCGAGTAGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAACATTCACTCCAACTATTTTAAAATCCACAATTATCACCACAATCCTCGTTGTATTTTTAATAAGCTCAATACTCATTCATCCGACAACCATATTCCCTCATATATATTATTCATAAAAATAATACATTAAATATGTCAGAGATTTTTTATCTCGACACTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCCGCATTCAACACATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCGGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //