Array 1 2088317-2087364 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLN01000003.1 Streptomyces diastaticus subsp. diastaticus strain NBRC 13412 sequence3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================ ================== 2088316 28 100.0 33 ............................ CGAGCGCCAGGAGCACGAGCCACGACACACACC 2088255 28 100.0 33 ............................ GACTGAGGGGGCTCAGGTTGAGCGCGACCATCC 2088194 28 100.0 33 ............................ GGTTAGCCCCCGGCGGGACAGCAAAAAGCCCCC 2088133 28 100.0 33 ............................ GCATCGTGGCGCGGGCGCCCTGGCCGCTGAGGT 2088072 28 100.0 33 ............................ TGCTCGATCCGGGCCAGCGGCAGGCGCAGGGCT 2088011 28 96.4 33 ......T..................... GCTCGGGACGATGCACGGTGCGATCTACGTGTG 2087950 28 100.0 33 ............................ GTCGGGGCGGCGCGCGTCGGCCACCCACACCAC 2087889 28 100.0 34 ............................ TGCACTGCGCGGCGAGGACACCTGGTTCCCCCCG 2087827 28 100.0 33 ............................ CGAGCGCATCACCGGCGGTACCGCCTGGTACCA 2087766 28 100.0 33 ............................ GTGACCGCCCGGCAAGTCACTACCTCGCCGGTC 2087705 28 100.0 33 ............................ CCCGGCTGCGGTGCCGGCTCCTTCATCAGCCAG 2087644 28 100.0 33 ............................ GGCCGCTGCGGTGGCGAGGAGTCCCAGCACTTC 2087583 28 100.0 48 ............................ GAACGTGGCTCCGGATAACGTGGCTCCGGAGGTGGCGACGCCCAGGTC 2087507 28 100.0 27 ............................ CTGCCGTTCTAAGCCCAAGCCCAGCTC 2087452 28 100.0 33 ............................ GAACGGACTCCTCCAGCACCACGACCACGCGTC 2087391 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================================ ================== 16 28 99.8 34 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : AGGACGATGTGCACCGCTGCACTCACCGGGCGGCCGCCTGCGCCAGGCGCCGGTCCAGTTCCCCGTCCAGCTCCTGTTGTTCGGTGGTGCTCGGCGCGTAGCCGGTCCACCTCTCCAGCGCGGCCCGGGCCTGCTCCGCCCGCTCGGCGCGTTCCTCCGGCGTCAGCAGCGTCTCAGCCAGCCGGGACAGATAGGCCCGCAAGGACAGGCCCTCGGCGGCGGCGATGGTCGCCAGCCGCTCCTTGGCCGCCTCTGGGATGCGTACGTTCGCGTCGGACACGTCTACTCCTCCTCCAGGGGTACGGGTACGTACCCGTACCCTACGGGAGATCTTCTGCGTCTGTGGGCCCCGGCTCGTCCGTGACCGCCAGCCGCTGAGGTCGCGTACATCGCGCTCTCTGAAGACGATCCCCGCCATTCGCTGCCCGACGCACGAACGAGGGGTGACGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : GCGCCGCCGGCACCTGTCCCGGCCCTGTTCTCGTATAGCTACGGCCAACGGACATGTAGCGCTGCGTGACGCTCCGGTCCGGGTTCGCTGTGAAGGTCGGCGGTACAGCGGGATGACGGGTCGTCAGAGTGGTGCCGCAGTAAATGCCGGATTTACTGCGGTAGAGCCCCTACGGTGATCTTCACGACCTGCGGCGGACTACCCAGCGACCACAGGCGAGGTGTACGCATTTACTGCGGCAGTGCCGGAAGGGCGGGGCGGGCATGACGATCGAACCGGTGACCGAAATCGGGAGCGGGGGCGCGCTCCACCTGCCGCGCACCCGGGTCGTGCCCCTGTCCGCCCCGCCCGCCTCGTACACCGCGGCGGTCGAGCGGTACCTCACCGGCGCGGGCATCGCGAAGTCCTCGGCACGGATCTATCGGATCTCGCTGACGACGTGGGGGTGGATGCTCGCCGGCGAACCGGCGCCGACCGGACTTGCCCGCCGGGGCGCGAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2093346-2092584 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLN01000003.1 Streptomyces diastaticus subsp. diastaticus strain NBRC 13412 sequence3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 2093345 29 96.6 32 ............................C TCGAGGAGTACGCCAACCGCATCTGACCCAAC 2093284 29 96.6 33 ............................A TGAAGTTGCTCGCGGCGATCTCAAAAAGGGGAA 2093222 29 96.6 32 ............................T TCATCAGCTCGTGCCTTGCGGTTGTCGTCCCA 2093161 29 100.0 32 ............................. CTGGCCGTCCTGGTCCCGGTCGTGCTCGTCCT 2093100 29 100.0 32 ............................. ATCGCGGGCATTTGAGTCCCTCTCGTCTTGGA 2093039 29 96.6 32 ............................C TGGCCGACGCCCTCTACGGCGACCCCGCCAAG 2092978 29 100.0 32 ............................. TTGACCAGGTCGGGGCACTCGGGCTCGGGCGC 2092917 29 96.6 32 ............................C TCGTCTTCGGTGAGGATGCGGGGGCGCCGCTG 2092856 29 100.0 32 ............................. GCACCTGACGGGCCGTGCACGGTCATTCGGTT 2092795 29 89.7 36 ..T........................TC TCCACGGCATGTCTTCGGAGGGCTGTCAGACGCAAG 2092730 29 100.0 32 ............................. AGGCCGGCCACGGTCCGATCGAGTGGACCGAG 2092669 29 96.6 28 ............................C TACGCGGACGGCATCTCGGTGCCGTGCG 2092612 29 89.7 0 .............C.............TC | ========== ====== ====== ====== ============================= ==================================== ================== 13 29 96.8 32 GTCGGCCCCGCACGCGCGGGGATGCTCCG # Left flank : TCTCGGCCTCCCGCTGCTCGGCTGTCGCGATCGCCTTGTCGATCCGGGCCAGCCACATCGCGTGCCACGTCCGCAGCACGTGCAGGCGCGGCAGGTCGGCGGGCAGATCGGACATGTGTTCGAGTCTAGGTATGTTGGTGTCGGCGGCGTGCGCCACCCCCCTGCTTGACTTCGAAACGCCGCCTTCCTTCCCCTCTCCCATCAATCCGCCCGGCCTGGTACCGGGGCCGCATCGCCTGCATGGAAATCTCGCTCGCCACGGTCATCGCCCTGGCACTCTGCGGTCGGCGGGCCCACTGGGTACTGGGCGCGCGGCAGTTGCCCACCGAGGCACATGCGTGGGTGTGGACCGAGGACGACGCATTCGGGCTGTCCGGCCGCGACCGCCCGGACCCCCGCCGCCCCTGGCCCGGCGCCCTCGCCGCACCTCCCGTGCCGAAAGGGTGACGCACATGAACGAAAATGAGGCATCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : TCCACGGCCTGAACGCGATCGTCGAATCCGCCCTCGCCGACCCAGACGACTTCTGTGCGTTGTCGGAGGCGTACCGCCGCTCCCGGTACCGGATCGAGGTCGTCGCGTCGCGACGCCCGAGGTGTTAAGCCAGCTGGGTATCATCGATCGCTTCCTCACCGAGGCCTCCGTCGGCGCGGGCGGACGGTTCGTGACCTGGGCGAACCACGACTCATGCGCGAAGGACATGCTCACGACGCTCGCCGTCATCGAGGCCGAGTAGCTCGCCGACGGCGTCACCGTGGTGTCCCGCGACGGCACGGTGCTGGACGACAACGAGCTCGTCGACGGCGCGTGGCGGCGCCGGCCCGCTGCCGACAAGGCGGTCGCCCGAGGCCGCTCGCGCACCTGGACGGCCCGGGAGACAGCCGTGTTCCAGCAGGAGATAGCCCGTGCCGAGGTGGGCGTGCACCGCGACGTGCCGAGCGAGGACGAGCGCCTGGCCGTCGTAATCGACGGAG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2096237-2094501 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLN01000003.1 Streptomyces diastaticus subsp. diastaticus strain NBRC 13412 sequence3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2096236 28 100.0 33 ............................ CTCCTGATCCCTCAGCATCCGCGTGTACGCCCC 2096175 28 100.0 33 ............................ CGCGAGGCCCTCGGCCGCGGCGGTGATGGCCAT 2096114 28 100.0 33 ............................ GCCCCTGCCAGACAGGGGCCTGGCAGGGGCAGG 2096053 28 100.0 33 ............................ CCGACGGTCGAGGAGCTGAGGCCGAGGCCGCCC 2095992 28 100.0 33 ............................ GGCCAGACCGGTCAGGGTCACGATCACGAGCCC 2095931 28 100.0 33 ............................ GGACGGGGGGCTGTCGCTGCCCGCCGCCGACGC 2095870 28 100.0 33 ............................ CCGGGGGCCACTCATCGGCCGACAGGCCGTAGG 2095809 28 100.0 33 ............................ CCCCAGCTCGCGACTCTCCCCGTACTTCCGCCG 2095748 28 100.0 33 ............................ GTCGCCCGATACTCGCGGGTTGCGCGCGAAATG 2095687 28 100.0 33 ............................ CCCTGGTAGAGGAGGAAGGGCCAGACGCACTCA 2095626 28 100.0 33 ............................ CTGATCGATATCCATGGCGGGGGAGAAGTTCAA 2095565 28 100.0 33 ............................ CCGGTACGGGATCGGCTCGGCGTGGCGGCCGGA 2095504 28 100.0 33 ............................ TCGGCCGCCGGATTTTTTGGGGGGTCGGGTGTG 2095443 28 100.0 33 ............................ CGCTCCGCCGCCTCGGCCCACGCGGCCGGAGCC 2095382 28 100.0 33 ............................ CACGAAGACCCCGGCCGCGAACACTCCCGCGAA 2095321 28 100.0 33 ............................ CAGGTGGACCAGCACGCCAAGGTCCTCCGGCTG 2095260 28 100.0 33 ............................ GAGGACGCGGCACCCGAAGAGCTGGTCCTCATC 2095199 28 96.4 33 ......T..................... CTGTCCGAGGCGCGCCAGATGGTGCTGCGCTAC 2095138 28 100.0 33 ............................ GCCCCACGGACCAGCGGTCGCGGCCTCGGCGCG 2095077 28 100.0 33 ............................ GCCCTCGGATACCTCGTCGCCGCCCCGCCGGCG 2095016 28 100.0 33 ............................ CGTGGCGCACGCCCGCGCCCTGGCCCTCCTCGA 2094955 28 96.4 33 .C.......................... TCTGTTCCCCTCGGTAGGGGATCAGGGCGGGGA 2094894 28 100.0 33 ............................ GCCCCGGAGGTGAGAGTCCGGGGCCTGTCGCTC 2094833 28 100.0 33 ............................ GCCTTTGCCGACGCCGACACCTCTCTCCGGCTC 2094772 28 100.0 33 ............................ CCGGCGCGCCGCCCTCCCCGCGTGATCACCACG 2094711 28 100.0 33 ............................ CGCGGCGGAGTGGCCGGCGGGGCGTCCCGCGGC 2094650 28 100.0 33 ............................ GGTGGCCGGGTCCGTCGACTACGGCCTCTCCAT 2094589 28 100.0 33 ............................ TTCCGAGGAGGGGCACGCCGTGGCGCAACAGGT 2094528 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.8 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : ATGCGGGCGTTGCCTTACCAAGGTCGTGGACAGCGCAAAGCCACGCAAACAACCTGCGGCCCCGCCCCGGACCACCGGCCACCTCATCCAGCAGGCCCCGCGTCGAAGGCGCAAGGAAGCTCTCCCACAGCCGCTCAGCCACAGCCCCGGTATCAAGCAGATGCGACAGAAGAAGATTCGTCTGCCCACCGGCACGCTCCGCCGACTTCCCCCACAAGACCCCTAACGGGCCCTCCACCGACTCCAGCGGCACCCCTGCATCCGGCACGCCGGACCACCCTTCGCTCAGCACTCACAACTGCCCGGCACAGTAGAGGACACCACTGACAATTGACGGCGGACGGCCCAAAGACGAACATCCCCCACGGCGGGCGCCCGCACCACGCGGTCACACACCGTGCTCCCTGAACTCCACCACTCGCTGCCCGGCCCACGAACGAAGGGCGACGCACATGAATGAAAATCAGGCACTCTCGTGGTGACCTCCCAGGTCAGCAAGT # Right flank : CCCGGCCGCCGCCGGCGAGAATCACCTCGCCATGTCGGCCCCCGGGCGCCTCCTCGGCATCCGTACGCCCCCTACCGCCCCAGCCCGGCCCGACGCACCATGGCTCTCCCGGCGCAGCGCTGGACCAAGGGGAGGGGCGGCAATGAACGTCCGTCGTGTGGAGCGCAAGCGCTGCAACAGGGCTCTGGGCGGGTGTGCAGTCAGACGTGCGGCTGGTCATGCGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTCACCGTATGAGTAGGCCGCCAGAGATCACCCGCACCGAGTGCCGGCAGTGCGGTACCGAGATCTACGGGGTGAACGGCCGCTACTCCTGCACCGTGTGCGGCTGGGTCAACCCCTGGTACGAGGGGCACGGCGAGCTGCCCACTGCCAAGGACGACCCTGACTACCCGCGTCGTAGAAACGCCCGCTGAGTTACAGCAGGCCGAGGTCCGTGTCCGGTCGGCACATGCTGCACGCCTCCACGTCGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2106559-2108355 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLN01000003.1 Streptomyces diastaticus subsp. diastaticus strain NBRC 13412 sequence3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2106559 29 96.6 32 ............................G CTCTCCCGGCCGTGGGTCTCCGCCCGGCTCAA 2106620 29 96.6 32 ............................G CAAGGTCCGGGCCCCTTTTCTTGCTCTCGGAG 2106681 29 100.0 32 ............................. ACCAGCCCAGATCTGTGCTGAGATCACATCAG 2106742 29 96.6 32 ............................G CGAAAGGCCCCCGCCGAATTCGACGGGGGCCT 2106803 29 96.6 32 ............................G CCGCGGGCGCCCGGGGGCTTGCCCCCACCGGC 2106864 29 100.0 32 ............................. TGCCTGGTGCGGCCGGGGCTGGCGTACCGGTC 2106925 29 100.0 32 ............................. GCGCAGATCAGCGCCACACAGGCCACAGAGCT 2106986 29 100.0 32 ............................. TCGGCGGCGGTACGGATGAGGGGAAGGGTCGT 2107047 29 100.0 32 ............................. TGGGGAGCCCCTGTGATGATGAAGCTCTATTC 2107108 29 100.0 32 ............................. CCCTACCGGCTGATCCCCGACTCCGACCCGTC 2107169 29 100.0 32 ............................. TGGTGAGCCACCGCCACCGTGCCCACGCTGCC 2107230 29 96.6 32 ............................T CCAGGACATCGCCGATGAGGGCCTGGTCCATG 2107291 29 96.6 32 ..................A.......... CCCCAGGGCACGTCCGCGGCCCCCACCACACC 2107352 29 96.6 32 ............................T CCGATCAGGGCGGCCCCGCCAACGATGATCTT 2107413 29 96.6 32 ............................G GCCGTCAGTCGGCCGTCTGGGGGGTGCCCACC 2107474 29 100.0 32 ............................. GCATGGGAACGTTCATCACGTCGCAACAAGCG 2107535 29 100.0 32 ............................. GGCGAGAGCCCCGGGGGAGTGGAGTTCCCCGG 2107596 29 93.1 32 ............T...............T GGCCACCGAAGAAGAGCTGCGCCGCGCCGCCG 2107657 29 96.6 32 ............................G CGGGTCCCCGGCGCGGGCAACGACACCGGCGG 2107718 29 100.0 32 ............................. AGTGCCCGCGCGGCCTGCGGGTGGCGGTGGAG 2107779 29 96.6 32 ............................G TGATGGAGGGACTCAAGGGCGCGCTCTTCAGG 2107840 29 96.6 32 ............................G GCTGAGGGGGAGTGGCTGCGGCAGGTCAAGTC 2107901 29 96.6 32 ............................G TGGCAGCGCGCCGCCTCGGCCGCGTTCACCGT 2107962 29 96.6 32 ............................G CGGGAGGGGTTGACCCTGGCGCGGCCGGGCGT 2108023 28 96.6 32 .....................-....... ACCCCGGCCCGCCGCCAGACCGCTGTTGCTCA 2108083 29 100.0 32 ............................. TGGGACCCGCGGGACGGCAAGGCCGACCTGGA 2108144 29 100.0 32 ............................. CAACTCGTCCGGGGACGCCGTCGTCACCTGGT 2108205 29 96.6 32 ............................T CCGTGCCATGCCTGCCACACGGCCTGCACGCG 2108266 29 96.6 32 ............................T CGGCTCGGCAGGCGTCGTCCTGGAGAGCTTCT 2108327 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 30 29 98.0 32 GTCGGCCCCGCGCCTGCGGGGGTGCTCCC # Left flank : CCGCACAAGACACTCATCCGGCCACCCGCTCACACCTTGACCTCTCGCCAGCTGCACTCGGAGAACAGCACATCGCCATCGTCGGACCAGAACTCAAAGACCAAGCCCCGCTCCCGGGACAACAGCCATGACCGTCATCATCTTGATCGCGGCTCCAGAAGGCCTACGCGGCCACCTCACCCGCTGGATGGTCGAAGTCAATGCTGGAGTCTTCGTCGGCAACCCCAGCCGACGAATCCGCGACCGTCTCTGGGAACTCCTCACCAACCGCATCGGCGACGGTCAAGCCGTCCTTGTCGAACCCTCCACCAACGAACAACGCTGGGCCGTCCGTACTGCCGGCCGTAACCGCTGGCGGCCCGTCGACTATGAAGGGCTTATCCTCTCCGCTCGAAGGCCAGCACATACACAAGATCGACAGAGCCGAAACTGATCGGTACACCGCAATGCAACTAAATGAGAACGGCAGACCGCTCAGATAACGCCGCAGGTCAGCAAGT # Right flank : CTTTCCCTGGCGTACGGCGTCGGGGAGCCAGCGGTCGGCCGGCGGTCGCCCTCCGGGATGGCCGAGGATCGCAACCGCCCGGGAGGGGAACCCCGGGCCTGGGGATCAGTCGTCGGGCGTGGCAGGACCAGCAGGTCCACTCTCCTGGCAGTTCGTAGTGCGTGGTGGTCCAGAACCCTTTGGGGCGTCCCCGGATCACGTTGATCTCCCAGCACCGCCAGCAGTTGAACTCGAATTCTTCCACCACTTCAGCAGTAACAACTTGGGGTGCTCGGGCGGGCGACTGCCCGAAAGTCGATCAAATGCGGCTGAATCATCAGGCTTGCCGAGCAGTCAGAGGTCTGGGCAAGCCTTCCACCTGGTCTCTTCGTGGGTTGGGCAAGCCTTTCGGCAAGTGGGCGTGTGGAGAGTGAGGGGCACATCCGTTCCCGAGGAGGTGTGCCGTGCACGACTGCGGACCGGCGCTGACGCCGTACGACAAGAGGCTGGCCACGAGGCCG # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGGTGCTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 21311-19583 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLN01000006.1 Streptomyces diastaticus subsp. diastaticus strain NBRC 13412 sequence6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 21310 37 100.0 36 ..................................... GACGCTGAGGCGGACCGCCGGACCAAGCTCCGCACG 21237 37 100.0 37 ..................................... CACTCCGCCTCGAAGGCGTCGAGGTCGGCGTCCGCCG 21163 37 100.0 37 ..................................... GCCAGCGCCTCGTTGCGGCGCTCGGACACCCACGCGA 21089 37 100.0 36 ..................................... GTCGTCGGCGACAACCCCGAGGCCGCCAACCAGAAG 21016 37 100.0 39 ..................................... GTCACGGTCGTCACCACCCGAGACTCAGAGCCGCTGGGT 20940 37 100.0 37 ..................................... GTGCGCTACGTGCGGATCAGCCTGTGGGCGGCCCGGC 20866 37 100.0 35 ..................................... ACTTCGGTCAAGCGGCTCTCGGCCTGCGGACGGGT 20794 37 100.0 36 ..................................... TGCACGTGCGCAACCCAACCGCACGCCGCCGCCACG 20721 37 100.0 36 ..................................... CGCTCGGCGAGCGGCTGCTGATCGCGGGCCGGTCCG 20648 37 100.0 37 ..................................... AGCGCTGGGCGGGCGAAGTCCACCGTAGCGACCGGCT 20574 37 100.0 36 ..................................... TTCGGGGCGAGCAGCCCTTGAAGGGCGTCCATCAGC 20501 37 100.0 37 ..................................... CTCTGTGCAGAGCGTACGAGACGGCGACCCCTCCGGT 20427 37 100.0 36 ..................................... GCCGTTCGTGTCGGATGCCGCCTCCATGACCTGCGG 20354 37 100.0 38 ..................................... CCGTACGTACCCAGGATGGTGTTGGCCCGGTTCCACGG 20279 37 100.0 37 ..................................... GTCGGGGCCGCCGTGGTCCCAGTCGTCGTGCCGTGTG 20205 37 100.0 38 ..................................... TCAAAGCGCTACATCCTCCCGACGAGCACCGACGTCCA 20130 37 100.0 37 ..................................... GTCGGGGCCGCCGTGGTCCCAGTCGTCGTGCCGTGTG 20056 37 100.0 36 ..................................... CCCCACGTGGGGCGCAGTCCCTTGTCCTCGGCAAGA 19983 37 100.0 35 ..................................... TACACTTCGCAGACCGCCGACTGGGTGTCGATCTC 19911 37 100.0 35 ..................................... GCCGCGTTGGCGGGCACCGGAGCGGTGACCTGGGT 19839 37 97.3 36 ......................A.............. ATCTCCGCCTCGCGGCGGGCCCGGTACGCGTACTCG 19766 37 97.3 37 ......................A.............. TACGAGGACATGGAGCAGGAGGACAACGACCTCGGCC 19692 37 97.3 36 ......................A.............. GACAAGCTCTGCACCGAGCGCACCGGACGACCCGTC 19619 37 83.8 0 ..............................GAAGGC. | ========== ====== ====== ====== ===================================== ======================================= ================== 24 37 99.0 37 GTGGCGGTCGTCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : ACGCATCCTGGCCCGACACCTCCGAGGAGACCTCCCCGCCTACCTGCCCTGGGCCGCAGCCTGATGGAACTCCTCCTCACCTACGACGTCGACACCACCACGCCCGAAGGCCGCCGCAGACTCCGCCGCGTAGCCAAGCTCTGCGAGGGACACGGCATCCGCGTGCAAAAATCCGTCTTCGAGATCATCACGGACGACCAAACCCTGCTGCAGCTCACATACGACATCGAGGACCTGATCAACACCGAAACCGACAGTGTACGGATCTACCGACTGCCCCCCTCAGGCACAGAAACCGTCCAAACTCTCGGAGCGGCAGCACCTCACCCACATCGCAGCGACCTGATCCTGTAGGCGACGGCACGCTCCGCTTCGGAACCTCAAGCACACACGCGACACGCCCATCACACCTAAGGAGAATGCCGGATATGTGCGCTAATGGGCATTCTTCAGCTGGCTCTCGTGAGTACTCAGATGGCCAAAACCCCTGACCAACCAGG # Right flank : ATCACCAAGCGCGCCGTCGCCGTCTGGGAACAGCGGGAGGTGGCACGCCTGTGACTCACCCCGCGCCCGACCCGGCCGTGGTCGTCGAGGAACTCAAGGCGACCGTCGTCGCCCTCACGGCCCAACTCGGCGCCCTCGCCGGCGCTCCGCCAGCCCTTGCCCCCTCACCTCGCCCCGCCAGGGCGAGGCAGGGTAAGCAGGTTCGGTACCGCCAGCCGACCTCCGAGGAACTGGCCAAGCTGACCACCCTCTGAGAACAACCAGGCTTGTCTCAAAAGGAGACCGGGATCGCGGTCGGGGCGGACCCCCGCCTCATCGGGCGTTGGGCCAGGGACGCCGGCCTGCCGAAGCACAAGAGCATGACCTACGACGTGTTCGGCCAGCAGTTGACAGCCGCGGAGATCGCCAGGCACCCGAAGTGTGTCGTCACCGAGAGCACGCTGCGACACCGGTTGGCGGTCGGCCAGCCCGCCCATGCCGCGGCGACGACGCCCGCTAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-15.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 29680-31927 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLLN01000006.1 Streptomyces diastaticus subsp. diastaticus strain NBRC 13412 sequence6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 29680 37 100.0 37 ..................................... CTCCCAAGGTGATCGTGGATGAGGGCCGGAACTTACC 29754 37 100.0 38 ..................................... TCGGTGTCGAGGCGTGCGTACACCCGCTGCACCTGCGA 29829 37 100.0 37 ..................................... ACCGTGAGTCCCCTGGTGGCCGCCTCGACCCCCGAGG 29903 37 100.0 36 ..................................... GAGATGACCCGGGGCCTCGCCCGGCACACCGACCTG 29976 37 100.0 37 ..................................... CACACCTCCTGTCCGACCTCGGTCCGCTCGGGGTGGT 30050 37 100.0 38 ..................................... TCGCCCCCCTCGCCACCCCGCGGCTCTACCGCGCGATG 30125 37 100.0 38 ..................................... CCTCCGGTCGGGCGGCCCTCACGGTTTTGCCGTGCGGG 30200 37 100.0 36 ..................................... GGCGATGTACTTGCCCATGGACACCCCCGCAGCCTT 30273 37 100.0 38 ..................................... TCCGTGACCGGCTTGCCCTTGGTGGTCCAGTCCACGAC 30348 37 100.0 37 ..................................... CCCACTTGTCGCCGGGCATCGTCATGCCGTGAAAGGG 30422 37 100.0 36 ..................................... ATCCGCTCCTCGACCATGTACAGCGTCGCCGCCCAT 30495 37 100.0 36 ..................................... CCCGTCGCCGTTTACTCGGTGATGTTGAGCGTGATC 30568 37 100.0 38 ..................................... GCCGCCGCGCCGCCGCAAGGGCGACACCCCCCGGTACA 30643 37 100.0 37 ..................................... CGGGGGGTTGGTGGTCGAGGTCAGCGGCGGCGGTGCT G [30669] 30718 37 100.0 38 ..................................... TTCTCGACGATGGAGCAGTGGCGGAGGAAGTCGACGGC 30793 37 100.0 36 ..................................... TGCGTCAGCTCGGCGGCCAGGTCGTCATCGAGCGCC 30866 37 100.0 36 ..................................... TCGGTCTTCACCGTGACCCCCCTGGTCGAGCGCTCG 30939 37 97.3 36 .............................A....... GGCGTCACCACCGCAGGACGTCGAGACCTGCGCGGC 31012 37 97.3 36 ..............C...................... CACGGTTCGGTGGGGGCATCGCGGATCAGGCGCACG 31085 36 94.6 37 ....................-........A....... ATCGGCAGCGTGACCAGCGGAGAACTGCGCGAGCCGG 31158 37 91.9 39 ..............C..A...........A....... TCCATCGTCCTCTGGAGGCTGGCCAGCCCCAGGTGGACG 31234 37 94.6 35 ..................A..........A....... TTCCATGCCGACGGCGCACGGACGTGCTGCTCGTG 31306 37 94.6 36 ..............C..............A....... ATTCTCCACGTGCCGGTCCAGTTCGTCAGGCGCGAG 31379 37 89.2 36 ..............C..A....A......A....... CAGAGCACGTGGCGCGGCATCACCATGCCCAACGAT 31452 37 94.6 37 ..............C..............A....... TCCGGGTGCCCGCTGAGCGCCTGCGCACTGACGAGCG 31526 37 97.3 36 .............................A....... CAGCAGGAGTACGAGGGCGAGCTCAACGCCCACCGG 31599 37 91.9 37 ..........T...C..............A....... TGGCCGGTCCAACGGGATCAGCCCGCAGGCCGTCGCC 31673 37 97.3 36 .............................A....... TCCTCTGTCGTGGGGCGCCCCGCGCACTACGGCGTG 31746 37 94.6 36 ..............C..............A....... CTCATCGCGGGCGGCACCGGCTCCGGTAAGGGAGAG 31819 37 86.5 35 .............CC...A..........A..C.... CACATCTCCTGGCGCAGGAGCAGATGCAGGTCGAG 31891 37 89.2 0 ............A.C......A.......A....... | ========== ====== ====== ====== ===================================== ======================================= ================== 31 37 97.1 37 GTGGCGGTCGCCCTTCGGGGCGGCCGAGGGTCGCAAC # Left flank : CCGCCACCCGAGCCGCCAGCACCGTCCCCGCCTCCTTGTGCGGCACCCCCACCCGGCCACCCGAGCCCTCAACCACCCCCAACCGCTCCTGCCAGGCACAACACCCCTTCCCCACGTCATGCACCAACCCCAGAAACTCCGCCGCCTCCCCAGCCCCGAACACCTCACCGAACCCCCGCGCCAGAGCAGCCGAACCCCTCAGGTGATCCACCAGCAGATGCCGCACACCCCACGGATTCTGGCTGTGCGCGAACAACTCACGACCCGACATCCCGGCCCCCTCACCGATCGACCACCCACCGAAGGCAGCCACCGTAAAGTGGGCCACCGACACCACAACCCAGACCACATCGAAGCGACCAGCCAGGCTGCTTCGGAACCTGAAGCGCACACACGACACGCCAATCACACCTAAGGAAAATGTCAGATTTGCTCGCAATTGGGCCTTGCTTAACTGGTGGTCGAGAGCACGCAGACAGACAAACCCCTGGCCAACCAGG # Right flank : CCTCGGCGGCCGCCAGGACGCGAAGCCCCCGCGCGGGGTCGCGGTCGCCCTGCATCGACGCGGCCTCGCTCGCCCCTCAGCTCGTCCTCGCCGGGCACCCGGTCACCGACGTGGCTGCCCTGCTTCGCGACCACGCCGCGACCGCCACCAGCCCCGCCACCACCACGGCGTACCTGGCGGCGCTCACCGGGCACTGGCACCGCAACGCCCGGCGGCCGGCGGCTGCCGGCGCCCCTGGCCTGCGGACCTACCAGCACCGTGCCGCCGCAGCAGGTCTCGCCCTCCTCATGACCCGCCTCTGACCACCGTCTCCGTGAACTCGCTCTCGGCGTGACCGGGTTCAGCCGAGATGGCGGCGAGGCGAGGAGGTACTTGCCTCGCCTCGCCCGCGAAGGGGAACCAGCGCGCTCGTCGGAGGGCTCCGCTGGTCGAACCTTGTACGCCGCCTGACAGCGTCCGGCGGGCGGCACGCAGCCACCGCCGGGCCCTCGCCCGCGCCG # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.87, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTTCGGGGCGGCCGAGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGGCGGTCGCCCTTCGGGGCGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-42] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //