Array 1 461283-459429 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEPQ010000002.1 Knoellia sp. DB2414S contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 461282 28 92.9 33 ..GA........................ AGGACGTGGTGCTGATCGAGCACGTCTGCTTCC 461221 28 96.4 33 ...........A................ GCGCTGGCCTCTCGGCACCACCACCGAGGCGTA 461160 28 100.0 33 ............................ GACCCTCGACGCGATCCTCGCCGAAGTGCAGAA 461099 28 100.0 33 ............................ GCCGCCGCCGCCCTGTGGGCGCTCGTCGAAGAG 461038 28 100.0 33 ............................ GCCTCCCGGCCAGGAGGTGCCGGTGACCGTGCA 460977 28 100.0 33 ............................ GTCGGCCTCGACGGGCGGTTGAACAGGGGTGCC 460916 28 100.0 33 ............................ GTGCGTCGGGTTGTAGCCCTTGCTCTGGAGGAA 460855 28 100.0 33 ............................ GGAGTACGGCCTCACCCACCCGCGCATCGAGTG 460794 28 100.0 33 ............................ GGAGTACGGCCTCACCCACCCGCGCATCGAGTG 460733 28 100.0 33 ............................ GTCGCTGCTCGAAGCGTGGGCTGCCCTGTACCC 460672 28 100.0 33 ............................ GGGCGCCTGACCGATGGCCGATGTGCCCCCGAT 460611 28 100.0 33 ............................ GCCCGGCACCTACACCTGCCCCGACGGGCAGGC 460550 28 100.0 33 ............................ GGCGTTGCACGAAGCCGCGGAGCACGAGATCGA 460489 28 96.4 33 ....................T....... GATGGCGGCCTTCTGCTGGCCGTGGTTGGTGAG 460428 28 100.0 33 ............................ CACGTACTGGCTCGACGACATCGCCTACGACGA 460367 28 89.3 28 ....................C....A.T TGCCCGGTCCGACGTCGGCCTTGGACGT GC [460342] 460309 28 100.0 33 ............................ GCACCAGCGCACCAGGGCCGGGCGCGGCGTCAT 460248 28 100.0 33 ............................ GCTCGGCGCGGACAGCCAGTTCTCGGCCACCGA 460187 28 100.0 33 ............................ CCGCTTGTCGTCCGCGTCGCGGGTGAGGGTGAG 460126 28 96.4 33 ................T........... GCGCAAGCCGGTCCAGTTCATCCAGGACGAGCG 460065 28 100.0 33 ............................ CTTCTCTGCGCGGCGTCGCGACTGCCAGTCCAC 460004 28 100.0 33 ............................ CTCGTCGTCCGTGGCGCCGACCCCGTCGGGGCG 459943 28 100.0 33 ............................ CCATGCGAGGTCGGTGACCAGCGCTCGCGCACG 459882 28 100.0 33 ............................ GCTCGGGGAGCTCGTGTCGTGGGTGAAGGGTTT 459821 28 100.0 32 ............................ GAAGGTCACCTCACCGTCGGCACGGTCCGGGT 459761 28 100.0 33 ............................ GAGCACGAACTGGCTGGCGAGGACGGACAGGCC 459700 28 100.0 33 ............................ GTTGCTGACGGCGACGGCGCCGACGATGAGCAT 459639 28 100.0 33 ............................ GCGTGACGGCTGGTCGCAGATCCCGCTGCGGTT 459578 28 96.4 33 .......................G.... CGTGCCACGCTCGGACTGGCGGGGGCCGAACGT 459517 28 100.0 33 ............................ CCCGACCGGCACCGCGCCCGAGCCGGGCACCGG 459456 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ================================= ================== 31 28 98.8 33 GTCGTCCCCGCGAGCGCGGGGATCATCC # Left flank : ATGAAGCGCGTAGTCGACGACATCTTCGATCTCATAATGGGCGACTCGTCGGAGCCGCAAGACCAGCTGGATCGCAACCTGCTCTGGGAGGACGTCGGAGGGACGGTTGCAGGTGGTATGAACTGGAGCGGCTTCGAGGAGTTGAACGTCCATGGGTACGCAACGGTCACGGGTCCAGATATCCCCGAGTATCCGGTCGACTGGTGACTGTCATCGTGATGGTCGCAGCCCCGCCAGGGCTGCGAGGCCACCTGACCCGGTGGATGATCGAGGTCCAGGCCGGTGTCTTCGTCGGCGAACTCAGCCGTCGAATGCGCGACCGTCTCTGGCTGCTGCTGTCGGAGCGGATCAGGGATGGGCAAGTGGTCATGATCGAACCCGCGGTAACGGAGCAAGGCTGGGCAATTCGCACAGCCGGTCGTGAAGGGTGGTCACCGGTCGACTTCGATGGACTGATGCTGGTGGCGCGTCAACGTCGGGAAACTGCCTGGTCAGCAAGT # Right flank : GGTGGAGTCCGAGTCCCAGGAGCAGCGAGCTTTGCCTGACGTCACTGTGCATGTTGTGGGCCCCGCCGAGTTGGTTACGCCCGCGGGCGTGACCGCCACTTCTCCGCCAAGCGCCGCGGCATACCCCCCGTCTGAGAGTCGCCGGTTTGAGGTAATCGGCGACCAGCATCGGGTCTGACTTCTGAAGGGACTTCCGAAGACAGACCATCATGCGGTAGCCAATTACCTCGAACGGGCGAAGTGCGTCAGGCGCCGGCGATGGCGCGCAGGGCGGCGAGGTGCTTGTCGTATGCCGCGCGGCCGGCTCGCGTGAGCTTGAGCCAGGTGCGTGGGCGCTTGCCGACGTAGCCCTTGCGGACCTTGACGTAGCCGGCCGCCTCGAGCGTCGAGACCTGTTTGGAGAGAACGGAGTCCGACACCTCGACGGCATCGCGAACCGCTGCGAACTCGGCCTCGTCGGCGCTGGCGAGGGCTGCCACGATGCTGAACCGCACGGGTGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGAGCGCGGGGATCATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCGAGCGCGGGGATCCTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //