Array 1 1185674-1185488 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150044.1 Bacillus cereus VD142 actaa-supercont2.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1185673 36 100.0 42 .................................... AATGGACGTTTGTTACGAAATGCACTCGTGTGCGCGTTCAAA 1185595 36 69.4 36 .A..G...............GTG..G.G.AGA...G AATGCGTTTTAGTTACAAAACGTACTCGCAGAAAGC 1185523 36 80.6 0 ......................C.TA.GCT..G... | ========== ====== ====== ====== ==================================== ========================================== ================== 3 36 83.3 40 ATTGTACGTTCGTTACAAAATGTACTCATGTTAAAA # Left flank : ATAAGTTAATTTTGCTGGCACTGGACTATCTGACCAAATGTCCTTTTTCAATTCCACTAAGTACATTGGATGAACAAAAAAATCATATGAAGGCAGCATGTTTTCTCATCCCTTCTCAGTTCTCTTCATTCAATGTATGCGCCTTGTCTTGTCCATACATCCGCTATCATCTATTTATATAAAATTACACTCTTGTCCTGTTCAGAAAGAAGTCGAATCTCATATCATGTTAAGGAAAAAGAATACCTTTTCAATTTAACACTCGATAAGGAGGATTTCTATGAAACGTGATATTAGAAAAGCTGTTGAAGAAATCAAAAGTGCTGGTATGGAGGATTTCTTACACCAAGATCCAAGTACTTTTGAGTGCGATGATGATAAATTCTCTCATCATAAATGTACAACAGGGTGTAAATGTACAACAGGGCGTAAATGTACAACAGGGCGTAAATGTACAACAGGGCGTAAATGTCCAAGAACAAGATGTACTCGCGTAAAAC # Right flank : AGAAATTTTTCTGGACAAAACGAAGTTTCTGTAAAAAATGCGAATTCTTCCCTCACGGACACGGTAGCTCTTGCGATGATGATTGTGATCATGGTAAAGACTGTCACGATGACGGGCACAAATGGAATGATTGCAGAGACGGACATAAGTTCCCATCTTGCAAAAATAAGAAATTCGATCACTTCTGGTATAAAAAACGTAATTGCTAGTTTTTTATACCCACCAAAAAAGGCCGCATTGCGGCCTTTTTTACGTTTACTGAAAATGGCTTATATCTGCAAATTGTTTTACTTTACCAAGATCTTCATCAAATTCAATCACACTAAGACTCGCGCTATGCATAAATGGCTCTCCCCATACATGTTCAATTTCAACACCTGCAAAATGCCCTACAAGTAATTTCGCTGCTGCAGCATGAGAGACAATTAAAATATTTTCCCCTTTATGCTTTTCTAAAAGAAATTGTATCCCTTCAATTACTCTTTTATGAACGGCCGCAA # Questionable array : NO Score: 3.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.16, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTACGTTCGTTACAAAATGTACTCATGTTAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GCTATACGTTCCTTACAAAATCGGCTAAAATTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 251013-250791 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150048.1 Bacillus cereus VD142 actaa-supercont2.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ====================================== ================== 251012 27 92.6 38 ............GG............. TTCTAACGCAAATTGTAATAGTTCCGCACGATTTAATG 250947 27 96.3 38 ............C.............. GTACCATAGCACTGTGAATGTCAATGTCGCGTTCATTA 250882 27 100.0 38 ........................... CTACACCCAGCGTTTTAATTCTTGCTTGCTTCGATCTG 250817 26 88.9 0 ......T.A.....-............ | G [250806] ========== ====== ====== ====== =========================== ====================================== ================== 4 27 94.4 38 TTTTATCTGAACTATGTGGGATATAAA # Left flank : ACTCTACCACTAAACGATATGAGAAATACAGAAGCTCAAAGATTGCTGCGTGATATTGATAATTATCAAGTCATTCCCTGTTCTATATATAGAGAGAATCTTGATTTATTTACTACATTTAAACAGGAAAAAGATTCGAAACAGCGGAAATTATTACAAATGCAGATTGAAAAGCTTACAACCTCTATCTCTAGAAAACAGGTTCAACGATACGGAATCGAAACAAAAGAAATTGATATTCCTGGATTTCAATACATTCACACTTTAAATTGTAAATACGATTTTGATAAAGAAAAGATAACAGGAACAGGAATTGTACTTCCGTAATTTTGCAGTGAACCTCGTTTTTATAAAACATGTAGAAAACTTTGATATGACAAGGTTTTTCAGCATTTTATAAGATAAGACAAAACATGATCGATGATTCGCTGCAACATGCTGGTTGCTACATATGTTAAAATATTGCTAACATAAGGTGTATCATCCGTATATAGATCGGG # Right flank : AGTTTGTAATGAAACCATAGAAATAGAGTCCTAATTAAAAAGGGCTCTATTTCTATGGTTGATACCTTCAAATTTTTTATCTTTCATTAGATCAATTTCACATTCAAGTTCTTTTGTTTCTATATTTAAAAAGTCCATTGTCATTGCAAGAACTTTTCCATCTTTCTCTCTCTTAGATCCCCATAAACGAACAGCTCTATTGATCTTACTATCTTCATATGTGATTTGAACTGTTCTTAATTCCTCTCCATCCACAAATTCACGATGTACCCAACATTCTTGAAATTTTAAATTCTCATCAGAATTATACATGTTGTCTTTTTTCTAATCCTCTCACGTAACAAAAATGAAATTTTAAAGTACTCAATAATTAATGGTACTTTTTGAAATATTTTTGGTTGCATTTCATTAGGAACAATTCTGACTATATAACTAAAAAATGTGTTATAATATCTATTGAACATATGAATAGGATAACAACTACCTGCTGTTGGCAAGTA # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATCTGAACTATGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //