Array 1 229795-230483 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMW010000002.1 Vibrio metschnikovii strain M17C.1 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 229795 28 100.0 32 ............................ ATTAATTTCAGCGACACGTCCATCACCAGCAA 229855 28 100.0 32 ............................ CCGATGCTCCAATCTCCAACGACATCGACCGC 229915 28 100.0 32 ............................ TCGATGCCAAGGTAGTGCTTATCGATTTGCTC 229975 28 100.0 32 ............................ ATAATGGGGATTATCATCAAAATCGCCTTCCT 230035 28 100.0 32 ............................ TATCACTCAAGGAGGAGGCTATCTATCTTCGT 230095 28 100.0 32 ............................ TCATCATAATCAACACCAAAGTCAACTAGGTT 230155 28 100.0 32 ............................ TTGAGATATAAACCTAGATACAGGCTTCTTAT 230215 28 100.0 32 ............................ TCCCCGTCAAAACTAATTACTACCCGTTAGTC 230275 28 100.0 32 ............................ AGTCCAAGAAAGATGCCCCCAACCGATACCGC 230335 28 100.0 33 ............................ ATTACATAAGAGCTTTGCACTGTGCGAATATCC 230396 28 100.0 32 ............................ AGAACGGCCATGTTTCGATTAATGGGGATTGT 230456 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 12 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGTATTATGGGCCGCTAAATCTGGTCAATCGCTTGCAAAATGCTTAGCCGAACTTGAACAAAACAAGCCAACAGCATTGTGCCGTTTGCCGTTTATTTACCTATACAGCCAGCAAACGAAGCAGCGCTCTCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGCAGCAACAAAGCACATCGCAAGACGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCAACCGTCCCGTATTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAAGTTACAAAGGGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGAAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGACTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5021-5288 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMW010000025.1 Vibrio metschnikovii strain M17C.1 Scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5021 28 100.0 32 ............................ AACCGATGCCGCAACTAACGGCGGCTTGAGTC 5081 28 100.0 32 ............................ TAGATTGTGTAGGCGTGCCAAGTGGGTTTTAC 5141 28 100.0 32 ............................ TTAGCTTTCGATTTAGCGTGGTATGCGTAGCT 5201 28 100.0 32 ............................ CCGAAATTAAAAAGCATTTCGAAGCGTCTTTT 5261 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAAATTAATGGGAACCAACATCTTGGTACGGAAGCTCGTGAGCTACTTGAGTTAATAGAGTTGTATGGTGAGTCTAACAAATCAATATTGGCTTCAAGTGTTCATGAATTAGTTGATGATAGCGCAAGGTCTGAGGATAGAATCTTTGCAAAACATAGGCTTAAAGGTTTCTTAATGTCTATTAGTGCTAAAGCTGGTGATGTTGCAACTGGTGTTTTACAGTCATTTATCGAAAATCAGATAGGATTATAGAAAAGGCGTATAACAAAGCATTTAAGAGTGATTCGCAACGCTTGGCAGTTTCGCTTCGCTCAAGTATAGCCAAGCGTCGCTCACACCTTAATGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATGCTTTATTGAACCTCAGCAAAATCAATATATAAATTTTAATGGGAAAACTCAGTCTGATTTAGAAGTTTTTATATTCTAATTTATTGATATTATGAGTTTATTGTTCTTTTTTGTGGCGATTGAAAGTTGAACGATGCTTTTGTGTTTTTGTCGGGTTTTGCTCTGATAAATTGTGTGTGCAAAAGGTTCGATTTTTGCTGAAAGGTCTCTTTCTTTTGTGCTGTTGGCTCGTTGATTCCACAGGCTATTTCGCTTCAGCATGTCTGGGATCTCATTGACATCTTGCTTGCTGAAAGTGTTTGGTGAGCGCAAGTTTATCGATGATTGTGTGCTTTTGTCCGGCT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1118-1746 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMW010000042.1 Vibrio metschnikovii strain M17C.1 Scaffold42, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1118 28 100.0 32 ............................ GACCGCATCAACTGTACCGCCGACAATCTCGC 1178 28 100.0 32 ............................ ACGTTTGAAGGGCAGTATTTATACGTCAAAGC 1238 28 100.0 32 ............................ TATCAAGGGCTTGTGTGCGACATTTTGAGCAC 1298 28 100.0 32 ............................ GTTTACGCATTGATGAACATCTTACTTGACCA 1358 28 100.0 32 ............................ TCAGAGCGAGTAAAAATCCGAACAAGCTGCGC 1418 28 100.0 32 ............................ AAGCATTGCGGAAATCCAATCATTGACAAAAC 1478 28 100.0 32 ............................ ACGCTCGATAGCTTCGACACGCTCGATAAGCT 1538 28 100.0 32 ............................ CGCTTGCGTTTGCAACGGGTATTTCATTTGGT 1598 28 100.0 32 ............................ TCGGAACGTGTCCAAGTAAAATTATCGGCAAC 1658 28 100.0 32 ............................ ATTTATGGGGATTGTAAATAGCGCAAAATGGG 1718 28 100.0 0 ............................ | A [1741] ========== ====== ====== ====== ============================ ================================ ================== 11 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATGATTAACAAACATTATCGTTTAATCACATTTGGCAGCTATTTTAATTTGGTTTGCATTAATGGCTTATTTATCTGATATTTATCATTAGAATCAATGGGTAAGCTTAAGTCGATTTAAAAAACAACGGTTTTTCTGTATCAAAAATTAGCTCATTTTAGATTAAGTATTTGATGTTGTTTGCTATTTTATAAGGGTTGCTTGGTGTTTCAGTAGCTATCTGGAACTGAAATATAACAAACAATTCAAGCAGACCCTCAACGCGCGGCATTTTTATTATGCGTTGAGTTTAGTGATTACGGTGTTGTGCGGGAAGTTGCTAGTAGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : TTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGTTTTTTCAGGAAAATTATGATCAGAGAAATTACGAAGTCAGATTTTGAATCATTCTGGCCAACATTTTTAGATGTAATCCAAGCTCAAGAAACTTACGCTTTTGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //