Array 1 39073-41122 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRYP01000018.1 Prevotella copri strain AF15-25 AF15-25.Scaf18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 39073 36 100.0 31 .................................... ACATCTATACCATACATCTATGTCGTTTTTA 39140 36 100.0 28 .................................... AAAAAAGGAAGTAACTCTGACATAACAA 39204 36 100.0 28 .................................... TAACCAAGAGTGAGACCAACCTTATTCA 39268 36 100.0 27 .................................... TTAGTTTATATTTCATTTCAGTATTTA 39331 36 100.0 28 .................................... TTATTTATGCGTGAATTAAGTGAAAAAT 39395 36 100.0 30 .................................... ACGATCATTCTGCTTCTGAATAGCCGAACG 39461 36 100.0 29 .................................... ATACACGCCCTCCTCTCTACATGTCTCAT 39526 36 100.0 31 .................................... CCATTATACGCAAGCATATACAGCCTACGAT 39593 36 100.0 30 .................................... AAATATCCATTCCGCTTTATGTTAGTGATA 39659 36 100.0 31 .................................... GTAACGTGGCAGTAGCAGAACGATTTGCATT 39726 36 100.0 29 .................................... TCATTGATGTCCGCGCGCTGTGCAATAAC 39791 36 100.0 29 .................................... AGAAGATGGATTTGACCGATTCACGTTAT 39856 36 100.0 27 .................................... CGCATAAAACGGAAAAGCCCCGACCTA 39919 36 100.0 30 .................................... ATGATCGTAGTAGCAGCTACGATTGGTGTA 39985 36 100.0 29 .................................... ACTGTTCTCGTTCTTCTTTCCTGCATCAC 40050 36 100.0 28 .................................... GTTGTTTGTTCTTTGCACACTTTTAACT 40114 36 97.2 29 ..........T......................... TGCGAGTTTAAGAGCATCCGGGAGAAGGC 40179 36 97.2 29 ..........T......................... TTATGGTCGTAACATTTGCAACTTTGTTT 40244 36 97.2 28 ..........T......................... TTCGTGGTTGCTATCGTCACGCAGAGAG 40308 36 97.2 29 ..........T......................... TCAAAATGCAATCTTTAACCATTGCGTTG 40373 36 97.2 29 ..........T......................... TTGCATTCTCCGCCGCCCGTCATGTGTTG 40438 36 97.2 29 ..........T......................... GGCTCAACCATAAAAGAACCCTTTCTATT 40503 36 97.2 29 ..........T......................... CGAATGTAGCAATGGTGTGACCCTCTTTT 40568 36 97.2 29 ..........T......................... CTGACAGCTTACGATGTATGGGAACCAGT 40633 36 100.0 29 .................................... TGCTTCGCTGAGCGCATAACATAATAAGG 40698 36 100.0 30 .................................... AAAGATGATGTACTCGTGACCTTAGGAGGT 40764 36 97.2 31 ...........C........................ TCGGCTGGCGCTTTCCTCGGGGGCTTTCCAC 40831 36 97.2 30 ...........C........................ ACGGAAGTTCCGGAACATAAGTTCATGCAA 40897 36 97.2 29 ...........C........................ CTATTTGAGAACAAGAGAGAGAGAAATCT 40962 36 100.0 27 .................................... TGCGGTGTCGGCTTCGCCGTCCGCTTT 41025 35 88.9 27 ...........C..-........C...G........ GCATTGCCCAAAAGAGGCAAAAGGCTA 41087 36 86.1 0 ........ATT...C.C................... | ========== ====== ====== ====== ==================================== =============================== ================== 32 36 98.3 29 GGCTAGTATGCTTCAATAATTTCTACTATTGTAGAT # Left flank : CGTTGTTTTATGGGTTGTAAGTCTGTAAAAGAGTATCCAATATTTGAGTTTTAAATGATAATTGTTAGTTATGACATATCGGATGACAAGATGCGTACCAACTTTTCTAAAATGCTGAAAAGTAATGGTGCCATTCGTCTTCAGTTTTCTGTGTATGAGGTAAGGAATACAAAGAGAATTGTGGATAATCTTGTGGCTAAGATAGAGGCTTATGCTAAACACTTCACAGCAGATGATAGCATAATTCTCTTTGATGTTGATTCAGATAAGCTTACTAAGTATGGTAATGCGATTCATAGGGACCAAGCTATAGTCTATTTCTGACTTAGCAAACCTTGGTCTTTATATTTTTGTAATAAAGCGCGTAACTTGCTTATTTACAGGTTGTTCTTTGAAATATTGTACCCAATATTATGGGAAGGGGTGGTAATACTCTTTAAAAAGATATGCAGAAGATGCCTTTATTTAAAGGATTTTTTGTATCTTTGCAATCGATAAGA # Right flank : TAATTCCATAAAGGTGCGATTTGGTTTATAGCCTGAAGGCAGAAGTTACATCTTGTTGAAGATGGGGTAAAGAAAAAAGTGGTTGCTCGGAAATTTCGAGCAACCACTTTTGCTATGTTTTAGAGAGTAAAAACTTAGGAGAAGGGGAACGGCTTATTCTACCTTCCAACTCACCAAGATTCTTCTGCCCCTAGAGAGAAGTTTACTCCTACTTTTATGATTCTTTTTCCATCACCAGCAAAGATTTTGGCAAAATCGGGCTGTTTTTCTTTATTTAACTCTGAAATAGAGTGGAATATCAGAGAAAATCTTTAAATTTGCATTTAAATACAATATTTTGTAAAGAATGGAAGATAGAGAACTGTTGCTGAAAAGTGACCCAGAGTTTGACCGCCTCGCCTTTACGGTGTTGGCTATCGAGGCTTCGGCACAAAAAATGGGTATATCGCCGTCTGAAATGAGAAAGCGATTGGATAAGGTGGGGCTAATCAAGAGTCTCA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAGTATGCTTCAATAATTTCTACTATTGTAGAT # Alternate repeat : GGCTAGTATGTTTCAATAATTTCTACTATTGTAGAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //