Array 1 121321-121789 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACBLI010000005.1 Neisseria polysaccharea strain ind_11 NODE_5_length_123181_cov_108.555270, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    121321	    32	 100.0	    34	................................	ACGTTCGCATAGCCGTTGTTTTCCAAATGACGCA 	
    121387	    32	 100.0	    33	................................	GTCTGATGCTTTATGCGCCATGCCCCTGACTTG  	
    121452	    32	 100.0	    35	................................	CATGACGTTGGGTGCGTCTTTGAGGCGTTGGTTTT	
    121519	    32	 100.0	    33	................................	CTTCGTTTGCAGCTCCCGTTTCGGGCGTTCTTC  	
    121584	    32	 100.0	    33	................................	ACGTAAGGGGGTTGTTATGGGCAGGTTGGGTTG  	
    121649	    32	 100.0	    34	................................	CCCCTCAACGAACCGAAAACGACAAAAGCCGACA 	
    121715	    32	  96.9	    11	.T..............................	AGCCAGCGCGA                        	Deletion [121758]
    121758	    32	  81.2	     0	.GT.G...G..TC...................	|                                  	
==========	======	======	======	================================	===================================	==================
         8	    32	  97.3	    31	TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC	                                   	       

# Left flank :   CATGGAGGGACAAGAAAATGCTGATGTTGATAACTTATGATATTTCGCTGGAGAATGCCGAAGGGCAGGCAAGGCTGCGGCGCGTAGCGAAACTGTGCCAAGACTACGGCGTGCGCGTGCAGTATTCCGTGTTCGAATGCGACATCTCACCCGACCAATGGGTAGTTTTGAAAGACAAACTTTTAAAAACCTACAATCCCGAAACAGACAGCCTGCGTTTTTACCACTTAGGCAGCAAATGGCGGCGCAAAGTGGAGCATCACGGCGCAAAACCTGCGGTCGATATATTCAAGGACACGCTGATTGTGTGAATCGCCAACCTGTTGTTCCCATAAAAATGCGGCAGGGTTGGCGAATTTGGGTTGTTCTTTAACAATCAGGATATTGCAAATGTGGATATGGCGGATAAGGCTGTGCTATACTCATATTTGTGCTTTTTTCGGGGGTTTGGCGAAGTCGGGGCTGCAAAGCCTGATGTAGTAAGGCTTTCGGAAGGAGCG
# Right flank :  CCACAATTTCATGGCGTACCTTTTTCTTTTAGCTATTGCAACGCGGCTTCGTCCCACAGTTTTTTGGGTTTCACGCTCAAACGGCTTTGTTGCCAAAATTCGTGTTCTAACTTGGTGCGTAATTCTTGGGCTTTTTGTTTGTCTTGTGTGCCAGTAGAGCGTCTAACTCGCTCGCCGCCTGGCATTCTGATGTCCAAGTACCATATGTGTAAGAAATCCTAGCGTTGTTTACAGTATATGGAAGACAATACCGGAATGAACATACACAAAAACACCCGTCTTACCCCGCACCGGCGCCAAGCCGTTTGGCGTGCCTATACGCAGGATAAAGCAACCGTAACCTCGCTCTCACGGCAATACCAAGTCAGCAGGGTAACCATTTACCGCATCCTCAAGGCCGCACGGTTACAGCTGCTCACACCACAAAAAAGTACCAACAACCGTTTCAAACAGGCAAAATACGGCATAAAACGGCTGGCCAAAGTTGAAAAAGCCATCGA

# Questionable array : NO	 Score: 5.84
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.90,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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