Array 1 2764810-2759265 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR699011.1 Roseburia hominis isolate MGYG-HGUT-02517 chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2764809 33 100.0 33 ................................. TACTACGGGCGCCGCTATTGGACTTGTGTTCAT 2764743 33 100.0 35 ................................. CCTGGTCTTAAGTGGCAAGATACATACTTGATCGA 2764675 33 100.0 35 ................................. GCTATACCGGCACACAGGTGCTCACTCCACAGCGA 2764607 33 100.0 34 ................................. GCTAACGCTTTAGTTGAGCAGATCATGGAGCAGA 2764540 33 100.0 34 ................................. ACGGCATTGCACGGCGTAAGAATGGCATGTACGG 2764473 33 100.0 34 ................................. GTCTGGATGGTAATCTCTTTTATACATATTATAC 2764406 33 100.0 36 ................................. AGATGTAGAGCTGGCACAGACGGACGCAAAGTATGC 2764337 33 100.0 34 ................................. ATTGATAATAGAGACAATCTTATCGCCAATATTC 2764270 33 100.0 35 ................................. TCATAATATCCATAAAACCGCCCCCCCTATGCTTC 2764202 33 100.0 34 ................................. ATCAAGCCATTTTTCCATGTTTTTCTTGTCTGGC 2764135 33 100.0 34 ................................. GCTCACTCTTTTTTTGATGACTCTTACCATGATG 2764068 33 100.0 34 ................................. GCATAACCATAATCCTTGTACTCCTCGCGCAGCT 2764001 33 100.0 34 ................................. AAAAAATGATGATGACGGATTCCAACGCAGCAAT 2763934 33 100.0 35 ................................. GCTAACGCTTTAGTTGAGCAGATCATGGAGCAGAG 2763866 33 100.0 35 ................................. TGTTATAAAGTGACCTAAACGTTTAGCTCCTGTGA 2763798 33 100.0 34 ................................. CTGCGAGCAGGGTCGACGAGCACATCAAGACGGA 2763731 33 100.0 36 ................................. CCCTGATTCCATTGAAAGCTAATGAACAGGAAACAC 2763662 33 100.0 33 ................................. ATGCAGATGATTGATATGGAAGCAAAGGTTGAG 2763596 33 100.0 33 ................................. ATAGGAATTCATGTGGCTTTTAACGCTTTCTTC 2763530 33 100.0 33 ................................. CGCTATATGCCTAGCTTGTGCCGCCGCTTCGAT 2763464 33 100.0 33 ................................. AAAACTTAACGTCGATTCGCCGTTCGGTTCGTC 2763398 33 100.0 35 ................................. CTGTCGTGTGCATTTTATAATGGACGTTTGGACAA 2763330 33 100.0 33 ................................. ATATTATCTAGATTGGTTACTCCATCTTTGACA 2763264 33 100.0 33 ................................. TCAATCTGCTGAATCCGCTGCTGAATTGCAGAT 2763198 33 100.0 32 ................................. CATATTCCGACATTGAGGATGACAGGCTTGTG 2763133 33 100.0 34 ................................. AGTCTATTGCAGACGATTTTGACGGCTTGCAAGA 2763066 33 100.0 34 ................................. AACCTGCTCCTCGTCGTTATCCTGTGGCGTTGTC 2762999 33 100.0 33 ................................. GATTGAATTATCTCTTTGATAACTCCAAACGCC 2762933 33 100.0 36 ................................. AGAAGTTATAGGTGCTGGCAAGATTTACCGTGTCTG 2762864 33 100.0 33 ................................. ATGTTGTCCAAGTTGGTTACTCCGTCTTTGACA 2762798 33 100.0 36 ................................. ATGCAGAGGTATTCATCCCAGTTTGCCGCCGCAAAA 2762729 33 100.0 34 ................................. AAATAGCGTCATACGTGACAAGCTACGCCCGTTT 2762662 33 100.0 35 ................................. CATGTACATAATCGACCGTAACATGAGTTTGTTTT 2762594 33 100.0 35 ................................. CGAGATCGACGGAGATCGTCACGTTTGTCTGATCG 2762526 33 100.0 34 ................................. AAGGTTTCCGTCAGCTATTGCCTGTGCGATCTCC 2762459 33 100.0 34 ................................. TCCGCCTCCGAGCATCTTACCGCCCATCTGTCCG 2762392 33 100.0 36 ................................. CTTGGAGATGCCGCAGTTCTTCAGAATAGCCATGTC 2762323 33 100.0 33 ................................. CTGTCGGCGCAGAATTCCAGGGCGTCTTATATG 2762257 33 100.0 36 ................................. AACTCATCGCCACGGAGCACGCCAGACCCTAACGCC 2762188 33 100.0 34 ................................. ACTAAGCGCAAGTTCTGACAGCCAGTACGCCATC 2762121 33 100.0 34 ................................. TATGGCTCCATGCATCATCCATTGCCCGATGCCC 2762054 33 100.0 35 ................................. TTTCAGATGTTTGCGGTGTTTTTCCGTGAGTCCAA 2761986 33 100.0 33 ................................. TGATGCACCTATCCGATACAATTCACCAAAGAA 2761920 33 100.0 34 ................................. TTGCGCGCCTACGGTGTAAGTCTAGGCGTTATCA 2761853 33 100.0 35 ................................. GCCCGTCTTGGTCTGCACATACACGCAGTCACGAT 2761785 33 100.0 35 ................................. GCCCCAGTTTGCATCAAGTACCACCCAGGAGCTGT 2761717 33 100.0 33 ................................. ACATTGTCAATAGCAAGATCAAGACGAGTCACA 2761651 33 100.0 34 ................................. TGTCGAAAGTGTTTGTGAAATATAAGTTTAATCG 2761584 33 100.0 35 ................................. TGACCATCCGGCATCTGTTACCTTGTTCTTCACAC 2761516 33 100.0 35 ................................. ATGGCAAACGTAAGAAATCAGATCAATGACTACTG 2761448 33 100.0 35 ................................. GATCTGCTTGTGATGTGTTGTTACCGTCGCTTGTG 2761380 33 100.0 36 ................................. TCCCTCTTCTGCGTTTTCCGCTGCGAGACCGTATAT 2761311 33 100.0 33 ................................. CTCATTGATTGATGCTTTTAGGTGTAATCCAAT 2761245 33 100.0 35 ................................. ATAATTTAGGTTATGAATTTATGTTTGTAAAGGAT 2761177 33 100.0 35 ................................. AAAATACTCCATGTCAGATGCCGACAGCACGGCGT 2761109 33 97.0 33 ..................G.............. GCATTTAACCGTCCATAGTTTCCCGCGTCATAA 2761043 33 100.0 33 ................................. CCGTTTCCAAGTTTGGGGAGCTCCGAAGCTGTT 2760977 33 100.0 34 ................................. ATATACTCCCATGCCGTTTCTCATGTTTGCAACA 2760910 33 100.0 35 ................................. ATTTTCTTGTCGCATACAAGGTCAATGGCGTTGTC 2760842 33 100.0 36 ................................. ATCTACTGTGTAGTGAATTTCCGTTCCGCAAGGTGC 2760773 33 100.0 34 ................................. ATTTTGAAGATATAGAGTGGTTATGCGGATATAT 2760706 33 100.0 35 ................................. CGCCATGGCGAAGCAATATCAAGTGGCGCAGCTAT 2760638 33 100.0 33 ................................. ATCTGCAATTTGACTTGCGTATACTATTTCCAA 2760572 33 100.0 34 ................................. TATGTATTTAATTATCATTAGCACCACCCCTTTT 2760505 33 100.0 33 ................................. ATATCTTTTACAAATTTAACTTCACTATGATTT 2760439 33 100.0 35 ................................. TGAAGGATTTTTTAAAATTCCCGCCACAAAAATCA 2760371 33 100.0 34 ................................. TTTGAATTGAAAAAATACACTGCATTGCAGATCG 2760304 33 100.0 35 ................................. GTCGACCTGTACTTCAAAGTTTCCATCGCACGCGC 2760236 33 100.0 35 ................................. TTGATCGGATATACACCAAAAAGAAGCATCTTTGT 2760168 33 97.0 36 ......T.......................... ATCACAGATACAGGCAAAGCACCAAGGGAATAGTGT 2760099 33 100.0 36 ................................. ATCACAGATACAGGCAAAGCACCAAGGGAATAGTGT 2760030 33 100.0 33 ................................. CCCTTGCTACAATTATAAAAACAGCGGAGCTAC 2759964 33 100.0 34 ................................. CGCAGTGGCTGCCGGGACAGGAGATAACTGTGGC 2759897 33 97.0 33 ......................A.......... ACGAATTACATGAAAGAGGGCAAGTCATTATTT 2759831 33 97.0 33 ......................A.......... TTTGTAGTGTTCCCGGACTCCACGGTCGCAACT 2759765 33 97.0 36 ......................A.......... CATTGGATATGTGGAGCAGAACATGGATTTCACGGT 2759696 33 97.0 34 ......................A.......... TTTTTAAAGTGATATGATAGTATCAACAAGAAAA 2759629 33 97.0 33 ....................T............ TAATATCAGTATGACCCATTTGCGTTTTTATTA 2759563 33 100.0 33 ................................. TGGAAGAAGCAACCACGATCACCGATATTCTGG 2759497 33 97.0 34 ......................A.......... TTTACAACGATCTCTCGTTGTATTGTTTGGTTTT 2759430 33 93.9 32 ......................A........G. AGTCAGATGGCTGATGTTGTTGCCCGTTCTGG 2759365 33 72.7 35 A......G.A.C....AA..T........G..G GTTGATCTCAGCTTGGAGACAGGCGTGAGAGTGGA 2759297 33 78.8 0 ..TAT....A.A........T....G....... | ========== ====== ====== ====== ================================= ==================================== ================== 83 33 99.1 34 GTCGCTCCCTGTGAGGGGAGCGTGGATTGAAAT # Left flank : TGCTGTTTGGAAGGAAGGTGAGTTATGTTAGTGCTGATTACTTATGACGTGAATACACAGACTGCGGCGGGAGTACGAAGACTTGCCCGGGTAGCGAAAATCTGTACGAATTACGGACAGCGGGTACAAAATTCTGTATTTGAGTGCATTGTTGATCAGACGCAGTATGTCATGTTGAAAAAGCAGTTGAAGGATATCATTGATGTGGATAAAGACAGTGTGAGGTACTATGTCATGGGGGAAAAGTATAAGAGTAAGGTGGAACATATCGGTGTGCAAAGGGCATTTGATGTCACGGCGCCGCTGATTATCTGAGAGTTTTTAGAGTAGTGCGAATGTAAAGTGTACATAAATACAGCGGAACATTCGCGCACAATTTATCAGTGCAAATAGCACAAAATCAAGTTATCGTCTGTGGAAAACGTGAAAGAGTAAAGGAATTTTTGGAAGAAAGCGTTGAAAACAGGAGGTCACAAAGGAATTTTATGTGTATATTTGCT # Right flank : ATCGCTAATAATATAGAAGGGATAGCATGGCTGTGTTTCGTACTCTGCGAAGAAAACACGTTTGTATCTACCACTTCTGGCCAAAGTCGCAACTATTACATCTTCGAGATAGCGAAAGATACTAAAAAACTATCCCTCTTCACTACGTAATAGGGGGGATGAAATAATAGCTTTGATGTGACTTGGTTTTGCTGGTGCATTTATCAACATCAAGAGTTTTGTGCATGAGACAGATATGTCGAAGAAGCAAAGGTAAAGTAGTTGAAGTTGTGGACACACAATAATGAAATATATATTCCATGCGAACGAAATCTTCTGTAAAATCCCCCGAAAATCTGTTGAAAATTCCTAAAAAATGTTATTATTTTGATGTTTTTTCTTGAAAAACGCCACTTACATTTTGTGAGATAAAGCGTTAGAATAGCTATGCTATAAGAATACTTTATACATATTTAATAATTTATTAACAGAAAGGGAGTATAGATATGGAATCGTATTCA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTGTGAGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //