Array 1 8083207-8080621 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS999641.1 Streptomyces viridosporus ATCC 14672 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8083206 28 85.7 33 G..........AG..........A.... GAGACCGCGGAGTCGGGCGGACGTATCCAGTAG 8083145 28 85.7 33 .TT................A...C.... TAATCCGCCAGGCCGGGAATGCTGTCCGGGCCA 8083084 28 89.3 33 .........T...G...........T.. GTCTGCCCGCGCCACCAGTCGTCGGCCTTGTCA 8083023 28 89.3 33 C.....................A....A ATCCAGCCGCGCGCATCAATGGGCCATCCCATG 8082962 28 85.7 27 G.....T..............G..C... CGATTGAAGTTGGAGCTGGAGCAGATG CCAA [8082938] 8082903 28 75.0 33 ..T.T.....G...A.....A.AC.... CTCGCCACGGTCGTCACACAGGCCGCCGCCGAG 8082842 28 85.7 33 ..G..................GC..T.. GTGACCTGGTGCGCGGCGACGGCACGGTCGGGG 8082781 28 89.3 33 .T......T.......T........... CCCTTGATCGAGTCCCGCAGGCCTTCCAGATTG 8082720 28 92.9 33 ..........T..T.............. ACGGCAGGCGGCGGCGTCGGCCAGGTGATCTCG 8082659 28 85.7 33 ......T.....G.A............A GGCCTGAACCCGTACGGGGAGCGGATGCGGCTG 8082598 28 96.4 33 ....................T....... GAGGTGCCCGACCCGGAGGGCCGCCCGTTCGGG 8082537 28 96.4 33 ......................A..... TACAAGGCGCGCTTCAGTCGCTTCTTCAACGTC 8082476 28 85.7 33 ...........A.T........AC.... GCCTCTGCCGAGGCGGTCTTGAACCGGGTCGTG 8082415 28 82.1 33 C.....TTA.........A......... CTCTGATCGAACGGAAAGGAGAAGAGGGTGACG 8082354 28 89.3 33 ......T.................C..A CCGTTCTCGGCGCCCGGCTGGAGCCCGAAGCCG 8082293 28 96.4 33 ..............A............. CTGGGCGAACTCGTCGGTCTCGACCGCAAGACT 8082232 28 100.0 33 ............................ AACTCCTCGTCGTACCAGGCCACGTCCAGAATC 8082171 28 96.4 33 .......................A.... ACGATCGACCCAGTCCTGAGCGGCTTCACCAAG 8082110 27 78.6 33 .T..T...A........A..-..C.... ACGATCTGGCCGGTAAGCGGGGTACCGTCCAGG 8082050 28 100.0 33 ............................ TAGTCGCCGGTGATGATGTTCGGACCCGGCCGG 8081989 28 89.3 32 C.....................CC.... TCACCCAGTAGCCATTCCAGGGGGAGCGGGCC 8081929 28 89.3 33 G..........A...........C.... TACCTGCCGTTCGCGGACGGCGGCATGGTCTCG T [8081925] 8081867 28 85.7 30 .......T........A.........GC TGTACGGGGTGCTGCCCGCCGTACCGCACG C [8081843] 8081808 28 75.0 33 ..T..T....T....T.......CC..A GAAACAGTCCGCCGCATCATCTGCAGGCGTGCG 8081747 28 92.9 33 ..T...G..................... TGGCTGGCAATCAGCCTTGCGGACGGCTCATGG 8081686 28 92.9 33 ..T..........A.............. CTGCGCTACCAGGGCATCACGCGTGACGTCCTG 8081625 28 96.4 33 .............T.............. CCCTCGATGATCAGCCGTCCGGCCGGGGTCAGG 8081564 28 100.0 33 ............................ GAGGCGGAGCGGGAGGGGTCACCGCAGCGGCGG 8081503 28 96.4 33 .............T.............. CCGACCAGGTCCAGCCCGTCTGCGGGCATCCCG 8081442 28 92.9 33 .T....................A..... CCGGAGGCCGCCGCGGCCGGGCGGCAGAATGTG 8081381 28 96.4 33 .......T.................... ACGATGAAGCCGGAAGGGCTGGGGAGCCTAGAG 8081320 28 96.4 33 .T.......................... TCCGCCCGCCTCATGCGCACCGTCACCGCGCAG 8081259 28 100.0 33 ............................ CGGCGTGATGGACCTGACGAACCGGGACGACGG 8081198 28 92.9 33 ......T....A................ GCGCCGGACGCGCAGACCATGGCCGTCACCGCG 8081137 28 100.0 33 ............................ GTCGCCGACCACGGGGTGGACGCCCTCCGCTAG 8081076 28 100.0 33 ............................ AACGCGGGGTGTCTCGCCCATCTGTGGCGGTCG 8081015 28 100.0 33 ............................ CTCGCCAAAGTCCCCGCCGCGTCCACGGGCACC 8080954 28 100.0 33 ............................ TACGGACCGGACGACGTGGACGGCACTCGCCGC 8080893 28 100.0 33 ............................ GTGCACCACAACCCGTGTGACGGCGGGGCCAAC 8080832 28 100.0 33 ............................ AAGTTCTGGGCGGAGAACCAGGCCCTCTTCTCG 8080771 28 85.7 33 ..............A...A....C...T CGGGCTCAGTGGGGGGTGTCTTCGCGCTCTTGG 8080710 28 92.9 33 ..............A........C.... CCGGAGGAGCAGGGCTACTCCACCGACGGCCTG T [8080706] 8080648 28 89.3 0 ......T......T...A.......... | ========== ====== ====== ====== ============================ ================================= ================== 43 28 91.9 33 TCCTCCCCGCCGACGCGGGGGTGTTCCG # Left flank : GCCCCATGGCCGGCGCGGCGATGTCCTCCCGCAAACCCTGGAACGTCGGCGACAACTTCCCCAAATCATGCACACCACACAACACCGACACCCAGCCCACCGCATCCCCCAGCGGACCGAACGCCCGGTCCAGCTCGGCACGGCAATGCGGCCCCACCAGCACATCCACCAAGCCCTCAGCCACCACCGCCGTATCCAGCGCATGACAGATCAACGGATGCGGAACCCGCCCCCCACCCGCCTTCCCCCACCCACCCCGAACATCAACCCCACCACGCTCCACACCAGCCACCCACCCATCCAAACCCACCCACCACCCCGGCCACACCCCTTTCCGGCCCACCACACCAGCACCGACCGACCCCCCACACCACACCTCAGGCCTGCAACCGACCGATAGGCTCACAACCAGCGAGCCCCGCACCGCCCGCACCTTGACTCAACAACACACCAAAACCCCCACCCGGCAACTGCCACTCACGCACCACGCTGACAACACC # Right flank : GTGATCTCGACTTCGCCGGACGCGGCGTACTCGTCCCGGGTGGCCGACGGCTACCCGGCGGGCTATGGGGCCGGCTCGTAGGTCACGGTCTGGTCGGGGCAGCCGGCCGCCGTCTCCCGCAGGGCCGCTACCTCGGCTTCGTCGGCCGCAAGGCTCCAGCGGAGCTTGGTGGCCACCCATTCGGCGACGTACCGGCAGTGCACCCCGGCAGCGGGCGGCAGCCACTGGGCGGGGTCCTGGTCGGCCTTGGAGCGGTTGGAGCGGGCGGTGACCGCGACCAGGCTGGCGTCGGCGCCCTGGTCGTTGGCGTATGCCTCGCGGCGCTGCGCCGTCCACGCGGACGCGCCGCTGTCCCAGCTCTCCGCGAGGGGCACCATGTGGTCGATGTCCAGGCCGGAGGCCGACGTCACCCAGACCTGGTCGTAGTACGACCACCAGCGCCCGCCCGACAGACGGCAGCCGGGCCCGACCACAGGGGATTCGACGGCCTCGGCGAGCAG # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCTCCCCGCCGACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCCTCCCCGCCGACGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [16-58] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 8092617-8094326 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS999641.1 Streptomyces viridosporus ATCC 14672 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================================================================================================= ================== 8092617 29 93.1 32 ..T...........C.............. TCGGGCGAGTACACACGGCCCGGGGAGCGGAG 8092678 29 100.0 32 ............................. CCCTGATGGCCAAGTACCGGACCGATACGGGC 8092739 29 100.0 32 ............................. GCACAGGACGCGGTCGCCCGGCACTACCTCAG 8092800 29 100.0 32 ............................. CGGATGACGGCCCGCCGCAGGGCGATGACGAC 8092861 29 100.0 32 ............................. CCGTGCAGGCGTATCCCGTGCCCGGCGATCCG 8092922 28 96.6 32 .................-........... CACTGGACAAGGCGCTGCAACCCACCCTCCGC 8092982 29 100.0 32 ............................. CTGAAGAACTCCTTCGGCAAGGTCGCCTCCCC 8093043 29 100.0 32 ............................. CCGACCGGGACATGGACCGGCGCAGCGTCCGC 8093104 29 96.6 32 .................A........... CGGCTGGTGATGTCGATGAACTCGGCAGCTTC 8093165 29 93.1 32 ..................A.......T.. CACTTCGAGTGGTGGCGGGGCCAGGCGTTCGA 8093226 29 89.7 32 ........T..T..C.............. CAGAGGCAGCACATGACGCGGCCGTCGGTGAG 8093287 29 96.6 32 ...........T................. CAGTCACCCCAGGGACGGCGAGTGACCCGGCG 8093348 29 100.0 32 ............................. ACCCTCGCCCGGCAGGGCTGGCTCGCCTCGTA 8093409 29 100.0 32 ............................. ACCCTCGCCCGGCAGGGCTGGCTCGCCTCGTA 8093470 29 100.0 32 ............................. GAGCTGAGGCAGAACCAGGCGGACTTGAAGGC 8093531 29 100.0 32 ............................. GCGATCGAAGCGCAGCTGGAGTATCAGCGTCA 8093592 29 100.0 32 ............................. ATGGGCATGACGGCGGGCTGGAGCGACCGCGA 8093653 29 93.1 32 ......T.......C.............. CCAGGGACGAGGCCGCCGTTCAGCGGGCCCGG 8093714 29 93.1 32 .......T......C.............. ACGACGACGGCGGCGAGTTCCCCGAACGGTGC 8093775 29 93.1 32 ..............C...........T.. GTACTTCCCGGGCACTGTCAGGGAAAGCGTCC 8093836 29 96.6 32 ..............C.............. CCGTCACGGTGCCCGCCCAGCCAGTCCCCGGC 8093897 29 93.1 189 ........T.....C.............. AACCCGCAGGGGCGGCCGATCCCCGTCCGCTCGTCCTCCCCGCCGCCGCGGAACAGGGCTACGCCATCCGCACGGCGGGAACCTGTCGCTGGTCCCCGTCGACTTCGACGGCCTTACCCTGATCCGTATGACCGCCGCACCAAGAGTAAAAGAAACGCAAAGCCCTTCTTAGGGTGCAGTTCAGGAAGT 8094115 29 93.1 32 ............A.C.............. GAGTCCTGGGAGAGGGACAGCACCGCCCGGGC 8094176 29 89.7 32 ......T.......C.....A........ CGAGCACTTCTATCCCGGCCCCGAACTCGACG 8094237 29 93.1 32 ..............C.........C.... CGATCATGACGCGGTGGTCGGGATGCCGGAAC 8094298 29 82.8 0 ...........ACCC............T. | ========== ====== ====== ====== ============================= ============================================================================================================================================================================================= ================== 26 29 95.9 38 GTCCTCCCCGCCGATGCGGGGGTGTTCCG # Left flank : CGTCCAGGACGTCCAGGCCCTGCTCACCCCGCCCCACACGACCACAGCTGACGACGACACCGACGAGGAACACTCCGAACGGCGCGACGTACGCATGGTCCACCTCTGGGACCCTAAAGCCGGAGTCCTCCCCGCAGGCGTCAACTACGCCAAAGGAGAAGGCTGATGCCCTCCATGGTCGTCATCGCCACCACCGCAGTCCCCGACCACCTGCGCGGCGCCCTCAGCCAATGGACCAGCGAAGTAGTCCCCGGCATCTTCATCGGCAGCGTCTCCGCCCGCGTCCGCGACGAACTCTGGCACGCCGTCACCGAAGTCGTGGGCACCGGCGCCGCCCTCCTCGTCCACCCCGCCGCCACGGAACAGGGCTACGCCATCCGCACCGCGGGAACCCGTCGCCGGGTCCCCGTCGACTTTAATGGCCTTACCCTGATCCGTATGACCGCCGCACCAAGAGTAAAAGAAACGCAAACCCCCTCTTAGGGTGCAGGTCAGGAAGC # Right flank : GCAGTTGGCGGGCGTGCGGTGCGCAGCTGGTGGTCGTGCCGTTGTGCGGCTGCGCAGGTGCCGCGCGCTCGATGGCTGCGCAATGGTCTGCGCATGGCGTTGGCCTGCTGTGGTGGGGTCCATGGTCGGGGTCCTGGTGGCCAGGGTCTGCGTAGCGCCCGTTCGGACCCCGACCACGGTCCTGGTCATGGTGGCTAGGAGTTCTGGGTGTGCATCCAGCCGAGCCGCTGGCCGTGGTCGGTGCCGGGGACGGGGTGCCAGACGGGTGCGGCGGGGCCGTGGTGGAGGAGGTCGGCCAGGGGTGCGGCGAGGACGGGAACCTCGCGCAGGAAGCCGGCCAGTGCGATGCCGCGGGCGGCCGCCCGCAGGGCGTGGATACGGGTGGTGACGCCGGCGGGGCCGGTGCCGTCGAGGACGAACAGCAGCCGGGGGAAGAGCGGGTAGCGCTGGCGCCAGCTTTCCTGCGCTGGTTCGGGGAAGGGCTGCTGCCGCGGCCGGGC # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.58, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGATGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGATGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.30,-12.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 8216025-8216175 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS999641.1 Streptomyces viridosporus ATCC 14672 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8216025 29 89.7 32 G.CG......................... ACGGACGCGCAGTTCCTCGAGTCCCGGCAGTT 8216086 29 100.0 32 ............................. GCATCTCCATCGCGCCGCAGTACAAGGGGGAC 8216147 29 86.2 0 .....................G.A.CT.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 92.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGTCGGATTGCGGTTTGTTCTGGTTGTTCGATTGCAATGGTCGGTGCGGCTGAGGGGCCTCCCCCTGAGTGGTGGACACGCTGATACTGGATCTGCTTGATTCGGAGGAGGCGAGAAGACCGCCGATGGCGCTGAAGGACTACTCGGACGAGTTCAGGGCCGATGCCGTGGCCCTGTACGAGTCCACGCCCGGGGCGACGCACAAGAGCATTGCCGCCGACCTGGGCATCAACCGGGCCGCTCTGCGGCAGTGGGTGCTGCGGGACCGTGAACGCCGCGGCATCGCCCGGCCGCTGATCCGGACGAGCGGATCCGGCGGTTGGAGGCCCGGGTGGCCGAGCTTGAGGCCAGCGAACGCAAGCTCGCAACCGAGCGGGACATTCTGCGCAAGGCTGCGAAGTATTTCACCGGAGAGACGAACTGGTGAGGAGCCGTCAACTAACTACTGCCTGATTCTGTCCCGAACGCGATCTGTGACGTGGCAGGCGGGCATTTCGTTG # Right flank : CATCCTCTCCCTCCACCGCCCGCGCACAGGCCTGTCGCCCCCCGGGACGCTGCGGGAAGCGAGCCATCGGTGCGGGTACCGGTAGCCACAGCCCTTGTCTCCATGCAGCTTGCTGGGGCGCCGGCGTCGCGGGCCGCGACGTGAGCGGATGGGCGGGATGTCGCACTACGGCCGCCTCGAGGAAGCGGACGCCGCACTCGGCCGCGCCATCCGCTTCTTCACCACCCACCCGGGCACCCAGGCGCCGACCGTCTCGAACCGGTCTGCTGACCCTGGCTCCGGCGGCCCTCACGTGATGTCGGCGACGTTTGCAAGAGCACCATCGCCGACTTCGCCTTCAGTGACGGCACAGCGAAGCCCCCGCGCGGGACCGAAGGCCGGGCGAAGGCTCCGTCGTGTTCAGTGTCGGTGTTGGATGTCGTAGATCCGCACGGTCTGCTGCTTCTGGTTGATGGCGATCACAGCGGTGACGAGAGGACGGATGATTTGCCGGTGGATGC # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //