Array 1 11051-10541 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZO01000075.1 Pseudomonas putida strain GM4FR PSEMO_contig000075, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 11050 27 92.9 32 T.........-................. TGCACTTCCGGCGTCAGGGTCTTGATCCTGGT C,G,GT [11033,11044,11046] 10987 28 100.0 32 ............................ CGGGCAAAATCAGGCGCCAGCGTGCCGATTCG 10927 28 96.4 32 .............C.............. TGCAGGGGAGTTTTGTCCTGTACGTTTGTGAC 10867 28 100.0 32 ............................ GATGACCGACATCCTTGCCAAGCTGGAGAAGA 10807 28 96.4 32 ...........C................ CGGCGACCCAGCCGTCCGGCACGCCACGGGTT 10747 28 100.0 32 ............................ TGGATGTTGGTCGGCGTGATTGGCTTCTCGAT 10687 28 96.4 32 ............G............... TATCGGGGATGCAGCTGATCCCGACACCGTTC 10627 28 92.9 31 .........T...A.............. ACCTCGATATCCGGCAGCACGATCAGCCCCC 10568 28 89.3 0 A..........CG............... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 96.0 32 GTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : GGTGCGCCGGGTTTGCTCTGTGTGCCGGTCTGCTACCTCACGTACAGTCGCCACCCTCCGTCTAGCAGCGGAATGTGGCGATCTCTTGAAACAACACAGAGCGTAGCCATGAAGAAACTCGTACCCGATCCACCACCCGTCCTCTGCATCCGCGCGGGCATGTCCACCGAGGAGGCAATACACAATGCTGAGAAGCACCTCCAAAGTGCCCTTTTCTCTCTGACCCGGTTGCCCTCACAGCCGCTACTCGCTGACCAAACGAAAATCAGCAGTGCCATCGTCAATCTGAAAATCAGCAGAACATTGTTGACTGTCGCTAGGGCGAAATCAGGACTCAGTGTGCCTGTGCAGTAAAGGGTATCTCGCCGCGGGCGCGCCCGCGGCACTGCGCTGCTCTTCAACGCTTCCGCTCATTCGTTCACCCCCGTGCCATCTTTAGTTTTTGGGCTGCCTATACGGCAGTGAACAGCGGGGCGAGGCTATACCTTGTAACCCACGTA # Right flank : ATCTAGGGTGTAAGGAGGAGGACGCACTGGCAAGACCGAACAACTAGGGTGCCGCAGGCCTGCTCTCGGCACCGGTTCATTTACGTGACAAGCGCTCCACTATGCCTCGCATCGTTGGACGCTGCGCCTGCCATTCCGCTCGAGTGATGCCAAGCAACACGACATCGAGACGCGCACCGTCTTTCAGGATGTTCTGGCGCCGGACTCCTTCCTGAGAAAAACCGAACTTGCAGTGCATCTTCACCACCGCCGTGTTGCTCTCCAGCACTTCGCAGTTGAGCTTTTCCAGCCCCGCTTCGTTGAACGCATGATCGAGCAGCCAGAACTCCACCAAGCTCCCCACCCCGCGCCCCTGGAGCGCCGGATCGAGATAGAACGCCCAGTCCGCCGTCCGGTGCGCCGCATTGATGGCATTGAGCGAAACGATGCCCGCGACCTGATCGTCGAGCATCACGACAAAGACCCTCTGACGCTGATTGCCCACCAGCGACGCCAGCCAC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //