Array 1 505770-504078 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012370.1 Moorella thermoacetica strain DSM 2955 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 505769 37 100.0 35 ..................................... CGTATAGCCGAAAGGCTTGCACAGCCTGGCGTATC 505697 37 100.0 35 ..................................... CTGTCCTGATTAGACCTTTGGTAAGACCGTCTAAT 505625 37 100.0 35 ..................................... CGAAAAATTTTTTGAGGATTTTTTTCGGGCGAGAG 505553 37 100.0 34 ..................................... ACTCGTTCGCCACTCTTTCAAATGGCGAACAAAT 505482 37 100.0 35 ..................................... TGGAAATGTGGTATAATTTAAGCAGGTGAAGGTGC 505410 37 100.0 35 ..................................... AACATATTCTTGGACTTGATCGGATATGGATCTAC 505338 37 100.0 35 ..................................... TGGATGGCAAGGAATATAAGGCCCCGAAGCCGAAA 505266 37 100.0 34 ..................................... TGACGGTGCTTTTAACCCTTCGTCTGATACGCAA 505195 37 100.0 35 ..................................... TGCAGGGCCGGAAGCTAGAGGACCACCGGAAGGTC 505123 37 100.0 35 ..................................... ATCTTGTATCATCTCAATCGTTTTGCCAAATAGCC 505051 37 100.0 36 ..................................... CGAATCCGAATACGGGGGCATATGCTGCCTATTGTC 504978 37 100.0 34 ..................................... TTTCTATAGTCCGCAGCGGAGCCGAAATTCGGTC 504907 37 100.0 36 ..................................... AATGTCTACATATACCTGTCCTGACTCGCCAATGAC 504834 37 100.0 35 ..................................... ATCGATCACGGCCATATGGGGGTTCAGGCCGTCAA 504762 37 100.0 35 ..................................... AGCACAAAATAATCATTTTCATAAACCTCGTGGGC 504690 37 100.0 35 ..................................... TCTGCGCTGCCATTAACGGCTACCTGGAGGGCCTA 504618 37 100.0 34 ..................................... AACCACTAAGTAAGCTTTGCCATCCAACAGAATC 504547 37 100.0 36 ..................................... CCTGGTCGCGCAGGAAACGCAAAACAAAAATCTCAT 504474 37 100.0 35 ..................................... CACAAGGGCCTTGATAGCGACATCAGCGCTAATAC 504402 37 100.0 35 ..................................... CTTTTGTGTCTCTTCCAAGGGCACAGGATAAATCA 504330 37 100.0 35 ..................................... CGTTTAAGCCCCATCTCTGCCGCTTTGTTGTGCAC 504258 37 100.0 35 ..................................... CTGCGAAGTGCCGGAGGGGTTTACTTTGACCAGCC 504186 37 100.0 35 ..................................... CTAACATCAGCCATGGCAGACTCAAAATCCATAGC 504114 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 24 37 100.0 35 GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Left flank : CGGTAAATATATCGCTTTTCTTAAGTGGTGTAGATAACATGTATATTTTAATTACTTATGATGTTTCTACAGAAACAGAGGCAGGTAAAAAACGCCTGCGTAAAGTTGCCCAGGTATGTAAAGATTTTGGTCAGAGGGTGCAAAAGTCCGTCTTTGAGTGTTCGGTCAACGAAGCCCAGTTTGAACAGTTAAAGCACCGGCTCTTGCAGTGTATCGATGAAAAAAGCGATAGCCTGCGGATTTATCGACTGCGCGAACCCGCGAAAAAATACATCCAGGAGTATGGCGTCAACCTTACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGCAAAAGGCCGAAAGGTTCGCGTTCTTTGGCGAATCAAGACCTGAAGCTAATTTTAGAGGTGAAGCATAATGAAGTATTCTAATTTAGTCATCAGGTTCGCGCAGAGTAGTAATATAGGGGTTGTCCGCCAAGGGTTTTAGCGCGAAGT # Right flank : AGGACGGCATCAACGGCGTAGCTTGGGTAGATGAGTTATGCCCGGCTATTACGCCCAGCTTACATTGATCGCAATGCTCTCCTGCTCCACCCATTTGCGGTGCTTCAGCATGGCCTGCAGGAGGGGGTGCCAGGGGGCGTAAGCCGGGTCCTCAGCCAAGTGCCGGAGCCTGGCGGCATACTCGTCGCCGAAGGGTATTCCGGCCGGCAAATACCTGGTATAAGTAGTGACATCCATAAGGTAGGGCTGCAAATCGGGAATTAAGTTGCGGCGGATATATTCGCAAATGCGGATGCCGCCGTAGTCCATATCGCCCCAGTGGTAGACCGGGGGCCTGGCGGTGGCTCCAGGGGATTCCCGGTAATCCTGGAGCCGGCGTAAAAAAAGCTGCACGCCGCGGTGGGGGAAGCCGCCGGTATATACTACTAAGCCAGCAGGGCCCTCAACCGCTAAACCCCGGCCCCCTCCCCCTTCCCGGCAAGGTACAGCCAGCTCACTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1769715-1767087 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012370.1 Moorella thermoacetica strain DSM 2955 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1769714 29 100.0 36 ............................. CTGCGGTAAAAGTAGTACTATAATCAACAGCAGATT 1769649 29 100.0 35 ............................. ATAATCTACAATTATTCCTTCCTTTTCGGCCAGCC 1769585 29 100.0 36 ............................. GGGAGATTTTCAAAGTCTCGACGTTATGCTCTACGT 1769520 29 100.0 35 ............................. AAACTCCACCGTCCCCTCCTGCGGGTCTAGCACCC 1769456 29 100.0 36 ............................. TTTGCCCTTGCGCCCTTGAGTTTTCTGCCCGTCGAA 1769391 29 100.0 37 ............................. TTTAAGCTTATCAACAGCCCCGCAGGCAATGGCGACC 1769325 29 100.0 37 ............................. TACTTACCCGAAGGTCATTGGCCGCGGTGGTATCAGG 1769259 29 100.0 36 ............................. TCGACCGCCTGAAGTCAATTCTCTACGCCAGTAGCG 1769194 29 100.0 36 ............................. CCCGCTCTCCCGAAACCCTGACCATCCCCACGGCAG 1769129 29 100.0 36 ............................. TCGGAGATTGCTGTATTTGTAAATGGGGCAAAAGAG 1769064 29 100.0 34 ............................. GGGTCGTCTTTACCGGTCCGTTAGCCTGCTCCGG 1769001 29 100.0 36 ............................. ATCCCCAGGAAGAACGGCTGCTGGCCGATCCTGTTT 1768936 29 100.0 37 ............................. AGCTTTTCAATGGATGGATTGCATCGACCGTGTTCAA 1768870 29 100.0 35 ............................. TTCTTTTATAGCGGATATTGAAGCTGGACGTAGCA 1768806 29 100.0 36 ............................. TAGCGATGACGGAATAGCCCCGTAAACCGTCGAAGC 1768741 29 100.0 35 ............................. CCCGATAACGCGGAATGAGTGCCGCGAGTGTGCCA 1768677 29 100.0 34 ............................. TGTTAAGGGGCACAAAGTGTTTGTCCCCTTCCGG 1768614 29 100.0 37 ............................. GGTTTATAAGCATAAGTTTCCGTGCCGTGGGCCGAAG 1768548 29 100.0 36 ............................. AATGGATCGTCTGGCATGGTGAAGAAGAGTACGGCA 1768483 29 100.0 37 ............................. TGCGGCATATCAAGCAAAAGAAGTCGATTTACGAAGA 1768417 29 100.0 37 ............................. AAGAAACCGGCGACAAATAAGCCGGTTTTCTTTTTGC 1768351 29 100.0 35 ............................. TATAAACATCAATTAAATCCGCATCAAGCATTTTA 1768287 29 100.0 37 ............................. TCCGGCTCGGAGCCAGGTGGTTTCTTCCGTGACAGGG 1768221 29 100.0 35 ............................. TCCTTTTACTGATGACCCTGAAGGCAATATGAAGA 1768157 29 100.0 35 ............................. TTACTCACCGAGGTTTCCAGTCGGGGCGACAACCG 1768093 29 100.0 36 ............................. TTACGGGGCGTAGGCGGAGAGCCGAAATTCATAAAG 1768028 29 100.0 36 ............................. CAAGCTCTCGGAGCTCTTCTCTCAACATTCCCACCC 1767963 29 100.0 36 ............................. CTACCAGATCGCTTGAATTCGGAGAAGGTCTTTATT 1767898 29 100.0 37 ............................. CTTTTCGTCCAGGTGGTCCAGGCGGCAGGCGTCTTCG 1767832 29 100.0 38 ............................. TTCGGGCAGGGAATAAAATATTTCTGCCGGCAAATCTC 1767765 29 100.0 35 ............................. CGCTCATGTAGAGGTACTTTTCAAACCCGTTGAGT 1767701 29 100.0 35 ............................. CGTCCCAAGCCGCTCCATACGCCACCGGGGTACCC 1767637 29 100.0 37 ............................. TACATTGAGCCACCCAGGCATCACGTTCCCTGGGTGA 1767571 29 100.0 36 ............................. TCATAACAGTAACCTTCCCTGTAGAGGAATTAAACT 1767506 29 100.0 36 ............................. CTGGCTCACCGTAATGCGGTATTTGGGTAACTGCAC 1767441 29 100.0 36 ............................. TTAGATATAATAGGTTAAAAAGCACTGGAATATTAG 1767376 29 100.0 35 ............................. TTTTAATCCCGCCTCTTTCAGTTTTACGGCCATTT 1767312 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 1767247 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 1767181 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 1767115 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ====================================== ================== 41 29 99.8 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : CTGGAAAAGACGATTTTGCACCGCAAGCTAAAAAGGAATATTCGCTATAAAAGTCTTGTCCGGTTAGACTTATATAAGCTTATAAAGCACCTCCTTGGTGAAGAAAAATATTCCCCCATGAAGGTGTGGTGGTAAATATAAGAGTGATCCTGATCTATGATATTAATACTGAAGACAACGACGGCAAACGGCGCCTGGTAAAGATCATGAAGACCAGCCGTAAATATTTATCTCATGTGCAAAAATCCGTTTTTGAAGGAGATATTACCGAAGGGCAAATATCCTTACTTAAGAAGGAAATAATGGCCATAGTTAACATGAAAAAAGACTTTGTCATCATTTATAGCCTCAGGGATGGAGTAAAGCTAAACCGTGAAATCTTGACTGACACCCCCGACCCTACAGATAATTTCCTGTAGTGTAAGTGCAAACTGGCGGTTTGACGCAGGGGCTTTTAAAAAATTGCTAAAATCCCTGTCGGGACAAGCCTTTCATCTGCG # Right flank : AGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGTTTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //