Array 1 292-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000284.1 Streptomyces sp. W007 contig00324, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 291 29 100.0 32 ............................. CCGACGATGTCGGGCGACGGCCATGGCCTCGA 230 29 100.0 32 ............................. AAGTACGAACAGCGCAACAACAAGCTCCAGCA 169 29 100.0 32 ............................. GAGCGCCCGCACCGCGGGCACCTCGTCGTCCT 108 29 100.0 32 ............................. TGGAACCGGCTCACGATCTACTCCGGCGACAA 47 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCCCCGCATCGTCACCGACATCCAGCAACTCCTCGACCCCAACCACACCTACGAAGCACCCGACCCCGCAGAACAAATGGTCGACCTCTGGGACCCGGTCAGCGGCTCCGTACCCGCAGGCATCAACCACGGAAATCAGCCGTGAGCCTCCCCACGGAAGAAGACCAACCATGTCCTCGATGATCGTCATCTCCGCCACCGCCGTACCCGATCACCTCCGCGGAGCCCTCACCCGCTGGCTCCTCGAAGTCACACCAGAGCTCTATGTCGGCACGGTGTCCGCCAAAGTCCGCGATGAACTCTGGGCAGCCGTCACCGCCTGCACCAACGAAGGTCTCGCCGTCCTCGCCCATCCCGCCGACAACGAACAAGGCTTCCAGTTACGCACAGCAGGCACCCGCCGCCGCGAACCCATCGACTTCGACGGCCTCACTCTCATCGCCTTCCACCGTGAAGGTCAAGAAATGGCAAACCTCCTCTAACAGCCCAGGTCGCGAAGG # Right flank : GCAGCTCGGGCGGCGTGAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [6.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9963-10297 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000284.1 Streptomyces sp. W007 contig00324, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 9963 29 100.0 32 ............................. CGCCGGCGGTGTTGCCCGAGGTGCGGGCGGAG 10024 29 100.0 32 ............................. CAGAGGACACCGCCGAGCTGCTCGCGGACATC 10085 29 100.0 32 ............................. GTGGCCAACTAGGTAAAGGGTTGACAGAGTTT 10146 29 100.0 32 ............................. ACGACCTGCTGCCGATCGGCCAGGTGCCGAAG 10207 29 100.0 33 ............................. TCCGTTGCCCTTGATCTTGACCATGCGCCCGTC 10269 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 6 29 100.0 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGTTCACGTACGCCGGATCGTCGCGAACCCGCTCGTAGGCCCCGGGAGCCTGTGCCTGAAAGGGCGGCGTGATCTTGCCGATGTCATGCAGACCCGCCCAGAACGAAACCACCGAACGCGCCTCTTCCACGCTCAACCCGAGTGCGCTGGCAAGAGCAGACCTGGTTCCGCTGCTCAGAATGGCATCCCAGAGCTCCCGAAAAACCGCACTGGTGTCCAGGAGATGACACACCAGCGGATACGGACTCGACAGCCCGCTTTCCTTCCCCCACAACCGGGCATCCAGAACACAGCCCCTCGAAGCCCCAGCCTTGCCATGCTTCAGCATGCCCACAGACATAGCACCCCCCACTGACAACAGCCCCGAATAGCCCAAGCCGGTCCTTAACTACGGGCCCGGCCCTACACTCGCTGCGCCACGACAACGAGACGAGACGCATGCACAACAACGCACTGCAAAGGGATGGCAAAGCGGCTGAGTAAGGGCAGGTCGCGAAGGG # Right flank : CGGTCCCGCGCCCGCCCGTCCCCACCTACTGAGTGCTCTCCGCGCGAGCGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 14223-14072 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000040.1 Streptomyces sp. W007 contig00042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14222 29 100.0 32 ............................. AGGGGGGAAGCACGAAGGGAGTTCCCCCGGTC 14161 29 100.0 32 ............................. GGCAAGAGCGTCACCATCCAGCTCTACCTCCG 14100 29 93.1 0 ..........................TT. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GGTCAAGCAGCACCGCGAACGCGGTCATGGCGATACGGATGACGTCGTCCGCGTCTGGGGCCGGGCCGGCGCTGCGGGTGCGTGCGAGCTCGGCGGCGCCTTTGGCGAGGACCTTCTCTCGGCCGGTTGCCTGCGGGTCGTTCAGCGCGCCCAGGACCTGACGCCATAGCGTCATCGCTCGCTCCAGTCCTGCGGGGCTCCTGGTCCGCGCCGACGACGGCACCGCCGTCCTGGCCGACGACGTCCGCTACGGACTCCGCCTCACCGACGCCGACGACGTCAGCACCTACTGACACACCTCATGGCAGAACCACTGACATCAGCTGTCGGAACCCACTGTCATCCTCATGTCGTCCGACACCCGGCAAGACCTCCAACGCATGCACCACTTCCGGCAACCCCACCCCTTGATGCAAGGTCACATGGACCACTGCAAGATCAGATGCAGCTTAGAGCTGACATCTGCAAGGTCAAGCCGTACCGGACAGTGGCCGGGCCCC # Right flank : AGGTGGTGGAGATGACTGCGGACGGCCCCGGGCGGCGGCTGCGCCGTGGGTACGGTGGTCCGTAGCTGCCGTCGACGGCAGCAACGGCGTTCTGCTCGTCCGCGTCCTACCCGCTGTTCCCCGCCGCCACCGCAGTGGCCGCCTCCGGAGCGGCAGCGGCCACTATGGGCGGGGCTTGGGCGTACGCCCGCCTGTGCGAGGTGGCAGTTCTGTCGTATTGGGGTCGCACGATGCGGTTGTGCGGCATCAGGAGCTTGGACCGGCGTGGTGTTCAGGCTTCGCGGGACCGGTAGCGTGCCGCTACGGCGGAGATCCACATCATCGCTGTGATCGCGCCGATCGCCAGTGTCAGGGTCCCTGCCGTGCCTCCGCTCATTGCCCAGCCGTTGCCGAGCAACAGTGCGGTCGCGGCGACGCGGGAGGCGATCGCCCGTCCCCGGTCCGCGGTGCGGGAGAAATGCCGGCCGAGCACGTAGTTGGCGGCGATCAGTGAGGTGAAG # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.10,-12.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3548-3820 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000281.1 Streptomyces sp. W007 contig00308, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3548 29 100.0 32 ............................. TGACCATGAAGCTTTCGACACAGGCGGACGTC 3609 29 100.0 32 ............................. ACCTCTGCCGCCAGACCCTGAACAAGGGCGAC 3670 29 100.0 32 ............................. GTCCTGCGCCTCAGCTGGATCATCGTCGCGGG 3731 29 100.0 32 ............................. GCGGCGAACGACTACCGGGCCGGGCTGAAGTC 3792 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GAGGTATATCCCGAGCCCCATCACAAGGCTGCGGCTCTGTTGTGCGAGCTGACGCGAAACCCGAGCCTGGAGAAGCGGAATCTGCTGTTCGCTGCCGCAGTGACTGCGGCCTACCTGTCAGCATGCGGGATGTCGGTAAGCCCTGGCCTGGATAGCGTCCTCCCGCTGGCCCGCGCTGCCCGGGACGGCCTGCCGGTGCGGGAGGTCGCTGCTCAGATCAAGACTTGGACGGGCTGACCCTCTCGTCGGTGGCATCTCTCCGGACGTACAGGCCAGCCCGGATGCCGTTGCGACCCTGGTGGTCGACGGCTTCGGGACACCGGGTGCATTGGCTAGAGATAGCGCTCTCACGGACACCGGCCCCTAAATACCCCAAGGCAGGACCGGGATGAGGGGCGTGCCTTTACACTCGCTGCGCGACGGCAACGAATCGGGATCCGTGGACGAAAACGATCTGCAAAGAGATGGCAAAGCGTCCGAGTAAGGGCAGGTCGCGAAGG # Right flank : GACGGAGCCGCAGGGAAGGACGGGACGAACGGGTGCTCTC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 400-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000245.1 Streptomyces sp. W007 contig00261, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 399 29 96.6 32 ............A................ CAGGCCGCGATCACGGCCCACCAGCTCATGGC 338 29 100.0 32 ............................. ATCGCCAAGAGCATGGACAAGGCGATCCGTAA 277 29 93.1 32 ............GA............... CCGAACAGGGCGACGGCGGTGCCCGGCAGGAT 216 29 96.6 32 ..................A.......... AGGATCCGCACGGTGGTGGCCCGGATGCTGAT 155 29 96.6 32 ..............G.............. ACGCAGGGGTGGCAGCTCCGCGCGTAGGACAT 94 29 89.7 32 ............T...........C.G.. ACCGGCGGCACCGGGCAGACCACGTCGGTCAC 33 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.1 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGGGGCGTCACGGTCTGGGTGAACAGGGGGACGTGCAATTGAGACCATCATCCAGATCGTCAATCCGTCGCTGCTCGACGACCTCCGCGAGCAGCAGAACACCGGGATCCCTTCATGACCGACGCCTTGGTGGCCTTCCTCCGGGCGCGGCTCGACGAGCAGCTGGAGAAGGCCCGCTTCGCAAGCAGCACGGTGGCTAAGGCCCCCGAGCGGTTCGGTGTAGATCCCGAGCAGGCCGCGGCGCATGCCCGGTTCTCCGTCGCCACCGCCGAGGTGCACCTCGCACTCCTGGAGGACACGGTCATCCCGCACCTAGGAGCAGGTGGGGCAGCCGACCGGACTGCTGAGTACCAGCTGCGGCTCCTCGCCGCCCCCTACGTCGAGCACAAGGACTACCCGCACGACTAGTGCTCGACCGCCAAGTCCCCTGCCAAGGTGGTGACCTCGGCTACAGGTCACCGACGAAGTCGCCCCCTCCGCCGCTCCCCCCACGATTTCCC # Right flank : GGTGG # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2281-2008 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000245.1 Streptomyces sp. W007 contig00261, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2280 29 100.0 32 ............................. CCGAAGACCCAAGGGGAACGAGACCTCCTGGA 2219 29 100.0 32 ............................. CTCGTCCAGGTCCGTCAGGTACAGCATCTGTC 2158 29 93.1 32 C...........T................ CTGGCGAAGAAGGCGGCCCGGAAGGTACGCAG 2097 29 93.1 32 ........................G.T.. CTGCACCCGGCCCGGTACATCGAGGTCGACAG 2036 29 89.7 0 .............C......A.C...... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCGACTCCGACCAGTGGCGGCGACCTCGTCGGCG # Right flank : CTGGTTTATGCCGTCGAGGCGGCGTTCAGCGCCGAGCTGACCACCTTCCACCGCGACACCACCTCGCTGCCCATGGTCGGCACCACCCGCCCGCTGAGCAATCCGGACGGCCCTCGATGAGCCTGAAGGCCGTAGACCGCAACGTCACCATCCTCGCCCTTGTTGCTGGAGATTGGTCAGCGCCGTTCTGTGGGGTTCGGCAGCAGACCAACGGGACTGTCATCGCCTGCCCGTGCTGGCTTTGAAGGGGCTGATGAAGAGCTCCAAGGAAGTAGTCGCAGCCGGTCGCCAGCCACTTCCACGGGCCTGTTCACCAGGGCACCCGCGCCAACCGCGGCACCCAGAACCGGCACTGACCCAATTCGATCACTTCGCCCACTAGGCGACCCACCCGCCGATAACCTCCGATCTCACACACAATCCCCTGGGGGACCATGAGCACCGAAGTACCACCGCCGGTCGAACCGCCAACCACCTCTGACGTACCCGCAGCTTCTGAA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.50,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [31.7-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 46086-45391 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGSW01000007.1 Streptomyces sp. W007 contig00007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46085 29 86.2 32 ACC.......T.................. AACTCATGGAGCCGGTCAGCTCCGAGGCCGAC 46024 29 93.1 32 .....T..............A........ TTGGTCGCAACGGTCCCCACGAACATGATCTT 45963 29 86.2 32 ...T.......A.A..............T CCGGACCGCGATGGGGGACGCAGAGTCATCAG 45902 29 100.0 32 ............................. CTCCTCCTCGTCGTCCTGGCCGAGGACGCCAA 45841 29 93.1 32 ...........T..........C...... ACGGGCACCCCGAAGGCGAGCCCTTCCAGCCG 45780 29 93.1 32 ..A.................T........ CGATGCTGGGGCGACTCCTCCGGTGTTAGCGC 45719 29 96.6 32 .............A............... TCGCCGATCCTCGCCGACCTCCTCACCAAGGA 45658 29 100.0 32 ............................. CGCGACAACCGTCGCGAGCCGCTGCTGCTCAG 45597 29 96.6 32 .........A................... GGTGGAGGGCTGAGATGCTCGACCGCGCGGCA 45536 29 96.6 32 ..........................T.. GAGGCTGGGGCCGACGAGCACACACCGGGGCA 45475 29 89.7 27 A...........G.........C...... TTCGGCCCGGACCGGCCGCAAGGACCG 45419 29 72.4 0 ...T....T..TT...GA.....A....A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 92.0 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CAGCACCGCCGCCCGGCGGGCGTTCCAGGTGTTGACCGCCGCCGTACCCCACAGCAGTTCCAGGGCCTCGCCGATCTCGTCGTCCGCGACCGACCCCAGCGGGCGGGCCTCCCCGATCCGCTCGGCGGTCTTGCCGACCCCGGTCCCGTAGCTGCGGACGGTGTTCGGGTTGCGGAGCGAGTCGAGGAAGGCGTCGGCCGCCGCGCGGACGGTCAACGCCTTCCCGGCCGGCAGTTGCACGACGGTGGACACCGCTTCCCCCTTGCCACGGATAACAGGGCCGCTTCACGTACGGCCCGGAGAACATCACCGCAGGTGACGAACCAAGATCCCTCAGATAATAGGGCATTATCTGTGGAAAGACTTCAACGGGTCCGGCCGCCGACGATCCGTCAGCTGCCCACCAGGGCCGATCGAGGCTTAGCGCCGGATTTCGTTCCGATGTTCCTCAACCCCCGATCCAGTCCCAGGAACGCTTCGTCGTACCGGCCGTCGGGCAG # Right flank : GCAGCCCACGGTGGCTTCGGAAGTTCCAGGTCCGGTCCGTCACCAGGTTCTGGAGCACGGTGCCGAACCCGAACGCCGCGCGCCCGCCTCGATACCGTTCACGCGAGCGCCCAGGTGGTGCAGCCGAGTTGGAGGTGCTCAAGGCCGGACAGGCGCTGCACCTGGGCGACGAACGCCTGGGTGAACAGGCGCTGCGCCGACCGCTCGCCGTACCGGTCGATGTGGTCGAAGACGAGCTGGTGGTCGGCGGCGGCGCGGTTGCGCCAGTCCAAGACCTGCTCGCGGGTGAGGTTCTCGAGGACGAGCTCTTGGTCGTCGTCGACGTCGCCGAACTCCGGCTCCGCAACGGGGACGACAGCGGCGGGGCGCGGCGCGGGCATTGCGACCGGGGCCACCGGCGCCGCCGGGACGTCGTCGGCCGGCTGCGCGGCCGCAGCTTCGGCGCGGTGGGCCTTGGCGGCGGCCTGACGGGCGCGGACCTGCTCCCACTCGTGCTCGCG # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //