Array 1 12532-15244 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNKA01000001.1 Quadrisphaera sp. DSM 44207, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 12532 28 100.0 33 ............................ GGGGTGCTGGACCAGCTGCGAGTTCGACGTGGT 12593 28 100.0 36 ............................ CCTGTACGACGACGCCGGCGCGCGGATCAGCCTCGC 12657 28 100.0 33 ............................ CACGTTCTTCGCGCGGGTGTGGCAGCCGGCGCT 12718 28 100.0 33 ............................ CCACACGGCGAAGGCCACCCATCCCACCAGGAA 12779 28 100.0 33 ............................ GCAACTTCACCGGCCTGGCGACGGGCGCGCAGG 12840 28 100.0 33 ............................ CGAGCGCCACACCCCGCTGCCGTCCGAGGAGGG 12901 28 100.0 33 ............................ GACGAGATCCAAGAGTGGATCCAGGACGCCGCC 12962 28 100.0 33 ............................ GCGGTAGACGCGCACGAACCCGGCCGCGGGAAG 13023 28 100.0 33 ............................ CGTCACGGTCACGGCGGTCGCGGTGGCGACGAT 13084 28 100.0 33 ............................ GGTGAGGTCGACCTCCATCACCCGCCAGCAGCC 13145 28 100.0 33 ............................ GACGCCCCACAGGATCGAGCGCACGTCGTCCTG 13206 28 100.0 33 ............................ CTCGCCGTACCCGTTCTTGGTCCGCCCGGTCCA 13267 28 100.0 33 ............................ TGCTGATCATCGAGGACGACGACCGCATCCGCC 13328 28 100.0 33 ............................ ACCGCTCCCGCCCCGAGAGGACGACACCCCCTC 13389 28 100.0 33 ............................ CCTAGCTGCCGCGCCCTGGGCGGGCCGCGACGC 13450 28 100.0 33 ............................ CAACTCCATCGCGCCGAGGGCGAGCTGGATGAC 13511 28 100.0 34 ............................ TCCGGATGCGCGCCGCGCCGCCCGCCGGTTAGCG 13573 28 100.0 33 ............................ GGCGGATCTGGACCCGGCTACGGGCAAGGTGGT 13634 28 100.0 33 ............................ CGGCGTACTCGACACCTGCGTAAGGCAGCATCT 13695 28 100.0 33 ............................ CAGTTCGATCGAGCGATACGCACATACCCGACA 13756 28 100.0 33 ............................ GACGGTCCACGAGCGCATCGAGCGCGTCCGTGC 13817 28 100.0 33 ............................ GGTTGAAGCCCTATCGGACAAGGCGTTCCGGCT 13878 28 100.0 33 ............................ CGCGGCGACCGCGTCCACCCCGATATCCCGGTA 13939 28 100.0 33 ............................ CGGCACCGGCGCTCCAGAGATGGTGATCCCGAA 14000 28 100.0 33 ............................ CGCGTCGGTCGGGAAGTCCCCGGACCCGGCGGT 14061 28 100.0 33 ............................ CGCGAGGTTCCCGATGCCGTTCGCGGTGCCGTC 14122 28 96.4 33 .................A.......... CCCGGAGGCTCCGGCGTCGTTGACGCGGACCCG 14183 28 100.0 33 ............................ GGAGTACGGCACGTCCTCGTAGGTGCGGGCGGC 14244 28 100.0 33 ............................ CACCGCCATGACGTCGGCGGTGAGCACTCCGGT 14305 28 96.4 33 .......................A.... GGGCGATGCACGCAAGGCCCACACGAAAGCGCT 14366 28 100.0 33 ............................ CCAGAACACGTCCAGGTCCGTCTGCTGGGAGGT 14427 28 100.0 33 ............................ GACGCCGTCACCACCCGCCACGACCTGCGCAAG 14488 28 100.0 33 ............................ GACCGTCACCCTCTACCCGCCCGTGCCGGTGGA 14549 28 100.0 33 ............................ CAGCCCGGAGGCCAGGACCCACATCTCCGGATC 14610 28 100.0 33 ............................ GGTCAGCTCGGCGATGCGGCCGAAGGCGAGCAG 14671 28 100.0 33 ............................ GGCGGCCAGGCCCTGCGGGGTGTCCCCGAAGAC 14732 28 100.0 33 ............................ GTCGGTCGATGCGCAGCTGCTGCGCGTCGCCCC 14793 28 100.0 33 ............................ GGCGCCCGGCAGCTGCCCGGAGGTGAAGCCGAG 14854 28 100.0 33 ............................ GAGGGCGACGCGGTGCCCGCCTCCCACGTGGAG 14915 28 96.4 33 A........................... CGTCTCGGCGGAGGACGTCGGGCGCCTGGCGAC 14976 28 100.0 33 ............................ CACCGCCATGACGTCGGCGGTGAGCACTCCGGT 15037 28 96.4 33 .......................A.... GGACGTGGGCACCAGCGCTCGCCTCGAAGCGCT 15098 28 100.0 33 ............................ CTCGCCGCCGAGGCCCGCGCCGAGGCACAGCAC 15159 27 96.4 33 .....-...................... GGACGTGGGCACCAGCGCTCGCCTCGAAGCGCT 15219 26 92.9 0 .....................--..... | ========== ====== ====== ====== ============================ ==================================== ================== 45 28 99.4 33 GCCGTCCCCATGCACGTGGGGGTGATCC # Left flank : ACGCGTGCCCGACCAAGTAATGCGGCAGGACCGGGCCCGGCGCCTGCCCGGTCAACGCCGTGAACGCGGATGCGGACAGCGCCTGAAAGGCGGGCACGGCCTTCCCCACGTCATGCCACGCCGCGACCACTTGCACGAGGCCCCGGACCTCCGCCGCTGTCAGCCCCGTCCGAGCGAGGACCTCCCGCTGCGAGGACGTCAGGACCTCATCGATCATCAGACCCGCCGCCGCGGCCACGTCCAGCAGGTGCGCCTCCAGCGGGTAGACCCGCCCACCGGCCAAGCCACGCTGCTTGCCCCACACCAGCCCCGGTACGAATGTCGCCGCCGCACCGGCCGCTCCCGACGGCGGGGGCGGGCGGTGCTTCCTGATCGGCATGCACGGAGGATGCCCGACCCGTCCGACAGTACGATCAGTGCAGCCCGCTGCACTCCGGGCCTACAACACCAAAGTGAAGCTAGAACGGACCCTGCCAACGCAACGCCGCAGGTCAACAAGG # Right flank : CCGTCGGTGCCGGCGTCCTCGCTAACAACCCGCACCGGAGCCGGAAGCCGAAGATCGTCAGAGGCTCATGACAAGACGCAGGGCGGCGTCGACCCGACGCAGCTCCTCGAAGGTGAGCCGCCCGACGGACTCCCCCAGCCGCTGACCGTCGACGGCCGCGGTCTGCTCGACCAGCACGCGTGTCATCCCACCAGCAACGGCGACCTCAGGGCGAAAGCTCGCCGCCAGCGCGGACGTCGACGTCGGCGCCACGAGCAGGGTGGACAGTTGTAGGGCATCGGACTGCATCACCATGGCGTAGCGTCACCCGGCTTGCTCATGACCGCTCGTGTCGCGAGGTGCCCTAGGGTGGAAAACCTCACTCCGCACGCAGCGCCTCCATGTCGCGGACCACCTGTGCGGCTCGCTGCCGGTCCCTAGCGTCGGCTGCCAGCGCCACGGCCTCGGCGCGGAGCCGATCCCGGACTGCAGCCTCTGCCGCAGCGACCAGCGCCGCGCGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTCCCCATGCACGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 854154-845888 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNKA01000002.1 Quadrisphaera sp. DSM 44207, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 854153 29 96.6 32 ............................G TACTGGATCACCAAGGCCAAGACCGAGGGCAA 854092 29 100.0 32 ............................. AAGGCCGAGCCGCGGGTCTCCCAGCCGGGCAC 854031 29 100.0 32 ............................. CTCTGCGGGCAGGGAGGGCTGATGCGCGCGTA 853970 29 100.0 32 ............................. CACCTCATCGCCGGGCAGATGAACGCCGTGCT 853909 29 100.0 32 ............................. AGGGCCAGCGTCGGGACGCCGTCGAACTTCCC 853848 29 100.0 32 ............................. GGTGCCCTCATCGACAACTTCAACAAGCTCGC 853787 29 100.0 32 ............................. TTCGACGTCGCCCGCGCGCACGCCGAGGGCCT 853726 29 100.0 32 ............................. GTGTCACCGTGGGAGCGAACAAGCGTCTCATC 853665 29 100.0 32 ............................. GCCGCCGTGCACATGATGCAGCGCCACGGCCG 853604 29 100.0 32 ............................. GCCCGGAAGCTGTTCGCGGCGAGCTGCCCGTC 853543 29 100.0 32 ............................. GCCGCGTTCCGAGCACTGGCAGGAATCACCCG 853482 29 100.0 32 ............................. CGTGCCGAACGAAGCAGCCGCCGCACGAGCAG 853421 29 100.0 32 ............................. ATCCTCGCCTCGATGCGCTACGCGCTCAAGCG 853360 29 100.0 32 ............................. GTCCCCGCGCTCTTGTCCACCGCCCATGCGGC 853299 29 96.6 32 ..................A.......... GTCCCCGCGCTCTTGTCCACCGCCCATGCGGC 853238 29 100.0 32 ............................. TGGAACGGCTCGTAGACCTTCTCGCGGTCGAT 853177 29 96.6 32 ............................T GCACAGCGTCTTGTTCTCGGCCTTGGCCTTGT 853116 29 100.0 32 ............................. AGCGCCCACGTCTCCTCGCTGCAGCGCCGCAC 853055 29 100.0 32 ............................. TCGAGCTCGCCGACCCAGGTCAGGTACGCCAG 852994 29 100.0 32 ............................. CTGCGCCGCATCGTGGACCTGGCCGCGGCACA 852933 29 100.0 32 ............................. GTGATCTTCTCGTCCTCGTCGCCGAGGATCGA 852872 29 100.0 32 ............................. TGGACCGGGATCGTGGCGTACTCGCTGCCCTT 852811 29 96.6 32 ............................G CCCACGCCCGTGCTGCCCGGGCGGAGCAGGAC 852750 29 100.0 32 ............................. GCCGTCCTCGTCAACCCGAACCTGCCCACCCC 852689 29 100.0 33 ............................. CTGTCCCTCGCCGAGTACGACGACCTCCTCGAC 852627 29 100.0 32 ............................. CATGCCCCGGTCGCAGCGACGTAGACGCCGTT 852566 29 100.0 32 ............................. GGATCAGCCAGTCCAGGGCCAGGTAGGAGCGG 852505 29 96.6 32 ............................G TCGCGGTGCTTGCTGGGGTCGCCGTCGGTGCA 852444 29 96.6 32 ........T.................... TACGACCCCGCCACCGCGGTGCAGCGCTCCGC 852383 29 100.0 32 ............................. TTCAACAAGCTCGCCGACGCCTTCGGCACCAA 852322 29 100.0 32 ............................. ATCCTCGGCAACGCCTACGCCTACAACATCGA 852261 29 96.6 32 ............................T AATGAGAACGTGAGAGCCAACGCGACGCTCGA 852200 29 100.0 32 ............................. AGCACCCTGTCCTCCGGGATCTCCGGGGTGCT 852139 29 100.0 32 ............................. GGGATGTGGTGACGTGCCCGCCTCGGCTCGTC 852078 29 100.0 32 ............................. GGGGACGCCGTCGAGCTCGAGTGCTGGGGCGC 852017 29 100.0 32 ............................. GCAGCGCCCACTACGACCTCGGCACCTTCCAC 851956 29 100.0 32 ............................. AGGTCCGCCTCAGCCAGGCGCGTCGCGGCGAT 851895 29 100.0 32 ............................. ACGGTGACCTGGAAGTCACGGGCGCCGCCCAC 851834 29 100.0 32 ............................. GGGAGGCAGCCGCTCGGCTGCCGGCGGAGGGG 851773 29 96.6 32 ............................G GCGTGCCCGTTGCCGGTCAGGGACTGGCCCGT 851712 29 100.0 32 ............................. AGCTGGCCCAGGCGGGGGTCGTGGAAGTCCTG 851651 29 100.0 32 ............................. CGGACCCACCGGCCCTGCCGGTCCTGCTGGCG 851590 29 96.6 32 ............................G TCCTCCACCTGCAGCCGCTCGGAGAGGGCGTC 851529 29 100.0 32 ............................. TCCTGGGACCTGCTCGGGCAGCTCGCCGAGGG 851468 29 100.0 32 ............................. AGCTCCGCGGCGCGCAGCCTTGTGGCCTGCAC 851407 29 100.0 32 ............................. TCACCGTGCTCAGTGCGGATGGTCGCGCTCAT 851346 29 100.0 32 ............................. CGTAGTGCCCGGCGGCGCGGGTGGGCACCTAG 851285 29 96.6 33 ............................G GACAAGGCGCTGCTGCTGTCGATGGTTGAGCAG 851223 29 100.0 32 ............................. GACGTCATGACCACGATCTTCGTCGGCCCCAC 851162 29 100.0 32 ............................. TCCCCGTCCAAGTCGTTCGCCTGCCATACCCG 851101 29 96.6 32 ...........A................. CTCACCGAGGAGGTCGCCCAGCTCGAGGGCAA 851040 29 100.0 32 ............................. TGCGGCCCTACGGACCCGGTGGCGCCGACATC 850979 29 100.0 32 ............................. CGGTAGCGATCACCCGATGGTCCTCGTCCACG 850918 29 100.0 32 ............................. GGGTCCTCGGATTACCCGGCTGCCGGCTCGGA 850857 29 100.0 32 ............................. CACCGGATGACCTCCTGCTCATCCTGGATCTT 850796 29 100.0 32 ............................. CCGAACCTGCTCACCCCGCGCCGCCTGGTTGG 850735 29 100.0 32 ............................. GCGCTGCTATACGCGCGCGCCTCCGTGAAAGG 850674 29 96.6 32 ............................G CCGGTGAAGCCGCGGTCGCGGGCGAGGTTGGA 850613 29 96.6 32 ............................G TTCGCGTCCGTGGCGAACGCCCACTGCAGGCC 850552 29 96.6 32 ...............A............. TCCTCCGCACTGCCCATCACTTACGGCCCGCC 850491 29 100.0 32 ............................. CTGGGTCTCAAGTCGGCGCCGCCTCGGGCCGA 850430 29 100.0 32 ............................. TACAACGAGCCGAACGGGAGCGCGTTGTTGTT 850369 29 100.0 32 ............................. GCAAACACCCGCGCCACGGGGCAGTGGGGCAA 850308 29 96.6 32 ............................G TCGAGGTGCTTCTCGGCGAGCACCTGCGCGAC 850247 29 100.0 32 ............................. ACGGCCCATCCGGCGAGGACGGGGACGCCGTT 850186 29 100.0 32 ............................. CTCCTCATCGCCGCATGCATGGCGGCGCCCTT 850125 29 100.0 32 ............................. AGCCACCCGTCGGCGGCGGCGATCGCGGCGCG 850064 29 96.6 32 ............................G GCTGCCGAGGCCCGCCGCAACCTCGCCTGGGG 850003 29 100.0 32 ............................. GATCCGGTTCGCGCCCCACCCGGACTCCAGGG 849942 29 100.0 32 ............................. ATGGACACGGTGGTCATGCGGCCGGCTCCTCG 849881 29 100.0 32 ............................. TGGTCCGGCCTCGGCGGGAAGTGGGCACCCTC 849820 29 100.0 32 ............................. GCGCCGAGGGCGCGGGCAGCGGAGGCCGCGGC 849759 29 96.6 32 ............................G CCGCGAGGCGGTGGTTGGCGATGACCTCCGCG 849698 29 100.0 32 ............................. CGGATCAACGCCGCGCGCGCCTCCAGCGCTCG 849637 29 89.7 32 ..........................GGA CCTCGCGCACGTGCTGCTGGCCGAGGGCAGCG 849576 29 100.0 32 ............................. ACCGCCGACACGTGGGTCCTGGAGGGTCCGGC 849515 29 100.0 32 ............................. AGGCTGTCCCCGGGCAGGTCGACGGAAGAGAC 849454 29 100.0 32 ............................. ATCCACGGCTGCGCCTGCTTCCGCTTGCGCAG 849393 29 100.0 32 ............................. GAGCGGGACGGCCGGATGAGGATCTTCAACCG 849332 29 100.0 32 ............................. CAGATCAGCGCGCCGACCGCGGCGGCGATCGC 849271 29 100.0 32 ............................. GCTGGTGTGGCGTCGGTGACCCCGGCGCGGCT 849210 29 96.6 32 ............................G CGCAGCTCGGAGGTGGTGCCCATGTCCACGAC 849149 29 100.0 32 ............................. GATGCAGGTCAATCGCGCTGGCCAGCGCGAAC 849088 29 100.0 32 ............................. CTCGGCGCGGTCGCCGATGGCCTGTCCCAGGT 849027 29 100.0 32 ............................. TCCCCTTCGACGTAGGCGCTCCAGGACGGGTA 848966 29 100.0 32 ............................. CTGCCGGTCGGGCTGCGGCTGGACCGCGCGCA 848905 29 100.0 32 ............................. CGCACCGGCACGGCCGGGGCGGGGCCGGCGTC 848844 29 100.0 32 ............................. AAGCCCGCGCCCATCGGCGCGCCGTCCGCCGC 848783 29 96.6 31 ............................G GCGTCGGAGTCCTCCGCGGCGACCCCCCGGT 848723 29 96.6 32 ............................T CCGAGCGATCTGAGCGCTCTTGTCGGCAGAGC 848662 29 100.0 32 ............................. TGGGTCATGGTGCGGGTCCCCTCGGCAGTGGC 848601 29 96.6 32 ............................G GCCGGGGACAGGGGCGGGTCGGGCTGGTCGAG 848540 29 96.6 33 ............................G TCCACCGGCAGGCTCCCCAAGCCCGGCAGCCAG 848478 29 96.6 32 ............................G CGGTAGCTGACCACGTCCCCGGCCCACGGCGC 848417 29 86.2 31 ......T.................G..GG TGCCATGACTGTGCCGCCTGCTCAAGGCAGC 848357 29 93.1 32 .C...G....................... GGGATCAACTGTTGGCGGGTCGGGGTGTCCTA 848296 29 100.0 32 ............................. TGCACGATCGCCTGCGCGAAGTCCGTGGCGGA 848235 29 100.0 32 ............................. TCGTCGAGCACTTCCGCGCCGACCACCGGCCC 848174 29 100.0 32 ............................. GACGTCGACCCCTTGTCCCCGCTCAGGTTCGG 848113 29 100.0 32 ............................. AGGTAGCCGAGGCCGACCATGCCGACCTTGCG 848052 29 100.0 32 ............................. TCGACGCTGCTCGTGTTGCCGCGCGGGCTGTA 847991 29 100.0 31 ............................. TCTTGAGCGGCTTGCCGTTCACGGAGCGGTA 847931 29 96.6 32 ............................G GCGTCGAGGCCGGCCTCCTCGGGGAGGGCGGC 847870 29 100.0 32 ............................. GCCGGCATCGGGGACGGCGCACCCGCCTACGG 847809 29 100.0 32 ............................. GACACGCAGCAGCCGCGGCCCTGCCAGCAGGG 847748 29 100.0 33 ............................. GGCGGCACGGTCCGGGCCCGCGGCGGCAACGCC 847686 29 96.6 32 ............................G CCGGCCAGGAGGCGGTCCACGGCGTCCCCGAA 847625 29 100.0 32 ............................. GGCCGGACGCTGAAGGACTGGACCGCCGGCTG 847564 29 100.0 32 ............................. CCCTTGTAGGAGTTGCGTTGTACGAGGGGGTA 847503 29 100.0 32 ............................. AAGCACAAGCCCGGTTGGGTTCTGTGGTTCCA 847442 29 96.6 32 ............................G ATGTTCATCTCACCGGTCTGGCGGATGAAGAA 847381 29 96.6 32 ............................G GAGAGCGTGCTGCGCCAGCTGGCGCGTCTGAC 847320 29 100.0 32 ............................. GGCCCGATAAATCAACCGACAGGAGACCCTTC 847259 29 96.6 32 ............................G CGGCCGATCCGCTCGGCGCGCCGGCGGACGCC 847198 29 96.6 32 ............................G TCCCTGGAGCAGGCCGCGCGGATGAAGGGCGG 847137 29 100.0 32 ............................. TAGTGGGCTCGCTCGCTCACTCGTCGATCGTG 847076 29 96.6 32 ............................G ACCGGGGCGAGGACGTTGGTCCACAGCCAGCG 847015 29 100.0 32 ............................. GCCACCCTGACCCCGGCGCCCTCGAGTCCGAG 846954 29 100.0 32 ............................. TTGGAGCCGTTGGCGACGACGATGTACAGCGC 846893 29 96.6 32 ............................G GCGGGGTCCTTCAGCCGGGTGGCGTCCCGGGA 846832 29 100.0 32 ............................. CCCCGGAACGCGCACATCTGGCTCGGCGGGGG 846771 29 96.6 32 ............................G GGGTCACGCACCCATCCGGCGGCCTGCAGGTG 846710 29 100.0 32 ............................. ACCGCCGGAATCAAGGTGCGCCACCTCGGGTA 846649 29 96.6 32 .....G....................... CTCGCCCACGCCGAGGACCGGGTCGACCTCCC 846588 29 100.0 32 ............................. TCCCCGATCTCGCAGCTGGTGACGACGACCTC 846527 29 100.0 32 ............................. ACCGCCGGGATCAAGGTGCGCCACCTCGGGTA 846466 29 100.0 32 ............................. GTGACCCTGGCCTCCCCGGGCACCACCCTCGA 846405 29 100.0 32 ............................. GCGACCAGGGTCCCGTTCTCCTCCAACCATCC 846344 29 100.0 32 ............................. TCCACCGCCCACAGCACGTTGGCGGGGGCGTC 846283 29 96.6 32 ........T.................... GTGGCGAGGTCGTCGGCGTGGACGTAGACGAC 846222 29 100.0 32 ............................. CGCAGGGTGCACTCCTCGGCGTCGACCACGGC 846161 29 100.0 32 ............................. GTGCAGCGGGCTCGGAAGGCGGCCTCGGGGAT 846100 29 100.0 33 ............................. AAGGCGCGGATGGGCCATGCCCACGCACGCCAG 846038 29 96.6 32 ............................G CGGTAGCTGACCACGTCCCCGGCCCACGGCGC 845977 29 86.2 31 ......T.................G..GG TGCCATGACTGTGCCGCCTGCTCAAGGCAGC 845917 29 72.4 0 .C...G........G....T.C..T.TA. | C [845892] ========== ====== ====== ====== ============================= ================================= ================== 136 29 98.6 32 GTGCTCCCCGCGTACGCGGGGATGAGCCC # Left flank : GACGAGGTTCAACCGGACATCGACGTGGTGCAGCTGTGGGACGGCGCCCGCGGGCGCGTCGCAGGCGGCGCCAGCTACGGGGACGACGAACCGTGGTGGTGATCGTCCTCACGGCATGCCCAGCCGGCCTGCGCGGTCACCTGACGCGCTGGCTCCTCGAGATCGGTCCGGGGGTCTTCGTCGGTGTCCTCACCTCGCGGGTCAGGGACCTGATGTGGGACCGCGTGGTGGAGCTCGCCAAGGACGGGCGGGCGATCATGGTCTATGCCACGCGGGGAGAGCAGCGCCTCGCCTTCAAGGTGCACCGGCACGAGTGGGAGCCCGTCGACGTGGACGGCGTCTACCTCATGCGCCGCCCGGCCGACGAGTCCGCGAGGCCCGCCGATGCAAGGCCGGGATGGAGCAGGACGAGCCGCTACCGTCGTGCTCGACGTTGACGCGTGCATTGAGAAGTGATGCCGACCTGGCCCCTCGGTCAGTGTCGTTGCAGCTCAGCAAGA # Right flank : CTAAGCGCGTGTGATGGCGAGCGTTCAGGTCAGGCCGGCAGCGGTTCCAGCGCTGCGAGCACGGCGGCCTGCACGCGCGGGTCGCTGAGCACCCGGAAGTGGCCCACCGCGCCGGGGATGCACACGTTGGTGGCCCCGGGCAGGTGGCTGCCGCCGGGGATGTTCGGGTCGACCTCGCTGAAGACGGACGTGATCGAGCCGTTGACGCCCGTGCTCGACGCCAGCTCCACCAGCAGCGGACCCCCTGGTGCGAACACGCGCAGGGTGCGTCCGGGCAGGAACCGGGCGTAGCGCGAGCCGGAGAAGGGCGTGTTGACCGCGACCAGGTGGCGCAGCGCGCCGTCGCCGTTGTGGTGCACCAGCAGGTGCTTGCCGATCAGGCCGCCCTTGCTGTGGGCGACGAGGGCCGCGCCGGTCAGGCCCTGGTCGTCGACGAAGCGCCGCACGGCCTGCGCCATGGCGGGCACCTCACCGGTGTTGTGGCCGAGCGCCTCCACCAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //