Array 1 1788560-1787812 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046791.1 Vibrio navarrensis strain 2462-79 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1788559 28 100.0 32 ............................ TTAGACAACAATCACAACTCGTCCATTAACTA 1788499 28 100.0 32 ............................ TATCCATGGCGGGATGTTTTGTTTACGGCTTC 1788439 28 100.0 32 ............................ GTCACCATTGCCAGAGCCGTCACCATCACCGT 1788379 28 100.0 32 ............................ TTCCGATATGCTTGCTATTATCGCGCTGTCTG 1788319 28 100.0 32 ............................ ATACTTTACGACTTTACGCCGCAAGGCATCGG 1788259 28 100.0 32 ............................ ACAACTAAGCCATAATTGCTTTGACCTGTTGT 1788199 28 100.0 32 ............................ GAACTCAAAGAGGCGTTAACGCAAGATAAGGA 1788139 28 100.0 32 ............................ AGCGAAGGCTCATTGACCTTCTATTACTACCA 1788079 28 100.0 32 ............................ ATGAGGCAAAGTTCTGTACCGGGTTATAAAGA 1788019 28 100.0 32 ............................ GCTTGGTGTTGACCTTCTAACCATTCGATAAC 1787959 28 100.0 32 ............................ GAGAGATGGCACGGGTGGCGATGCGGTTAATC 1787899 28 100.0 32 ............................ TCCTGCCTGCATTGTTCAGTATGTCAAAAAAT 1787839 28 92.9 0 ......................C.A... | ========== ====== ====== ====== ============================ ================================ ================== 13 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAATTGAGCTTTGGGATTGCGCGAGGTCAGTCAGTTTGGCGCAGAGTCGCTTTGGAAGTTTTGCTTTCGCTTTGAGTTTCCTGAAAGTGTGTGCTTAAAATTTACAGGTTTCAAAACAAACGAATGGCCACAAAGTTTGAGTCAATTCGGATTTCAAAACTCAAGCGGTTTGTTGGTTTCCCAAATCGGGTTAATCTCAGCTTTGATAAATCTTAAGGTGCTGAAATTTAAGCTAACAAACTGCTTAAGCGGGATTCACAATGCGTGGCATTTTCAGCATGCGGTGGGTTTCGTGATTAAGGTGGTGTGCGGTAGCTTTAACAGTGCATTGCTCACCCCTTAGCAGGGCGTTAACTGGCAATTAAATTACCCATCTTTTTTTGTTGAATCTTAACTTATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTCCATA # Right flank : TATTGGTAACTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGACTTGGCACGCGTGGCATTTTCGGTTTGCAGTTTGTTTAGTGGTTAAGTGATATGCAGCAACTTTTGTATTGCGTGCCTGCGCCCCTTAACGCGGCGTTATGCCTAAGGTGAAATTGATGATCAAGCAGCTTGATGCAAATGAAAAATCAGTGGTTGAACTGTCAGAGCGTTGCTTCGACGAACTTCGCCAAGTTTACAGGCCAACCGAGCTCGCAGTTAGCAATAAAAACAGTGCTAAAAGTGAGTGGAGTTGTTTTGGTTTCCATGTTGATCAGGTTTTAGTAGGAGTAGTTAAAGCTAAACAGGTTGGCTCAGAATTACAGCTTAGCTCGTTAGCAGTTACACCAAGTTTTCGCCAAAAAGGTGTAGCCAGAAAGCTCGTTGATTTCGTTGTTACACAGTTTAAGCCTATTAACTCAGTCTCGGTTTGGTGTGTTGAGCAAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1890572-1890364 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046791.1 Vibrio navarrensis strain 2462-79 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1890571 28 100.0 32 ............................ TGTCGGCAGTTCTAAGCGGTCATGATGCATTT 1890511 28 100.0 32 ............................ TAACCCGCATGTGCACTTGCTGATGGATTGGG 1890451 28 100.0 32 ............................ TTGTCGATTTTAAGCAAGACAGTAAGCGTCTT 1890391 28 92.9 0 ......................C.A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATTGAATTTTGGGACTGCGCGAGGTTAGCCAGTTTGCCGCAAAGTCGCTTTGGAAGTTTTGCTTTCGCTTTGAGTTTCCCGAAAGTGATCTATCAAAATTTTCGGGTTTTCAAATCGCATGAAAGGCCACAAAGTTTGAGTCAATGCGGGTTTCAAAACTCAAGCGGTTTGTTGGTTTCCCAAGTCGGGTTAATCTCAATTTTGGTAAATCTAAGGTGCTGAAATTTAAGCTAACAAACTGCTTAAGAGGGATTCGCAATGCGTGGCATTTTCAGCATGCGGTGGGTTTTCGTGATTAAGGCGGTTTGCGGTAGCTTTTGCAGTGCATTGCTCACCCCTTAGCAGGGCGTTAACTGGCAATGAAATGACCCATCTTTTTTTGTTGAATCTTAACTTATTAATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGGAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTCCATA # Right flank : TATTGGTAACTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGACTTGGCACGCGTGGCATTTTCGGTTTGCAGTTTGTTTAGTGGTTAAGGTGTTATGCAGCAACGTTTGTATTGCGTGCCTGCGCCCCTTAACGCGGCGTTATGTTTATCGGAGAAGTTCATGGTCAATTGGCCTTGTATTCTGAAATTAGATGGTGACGATGAGCTTGTTTATTTGGGTTCTGAAGCTGATTTGAATTGCGAGTGTGTGGATTTGATCGTTAGTCCAAGCGATCGAGTCATTGATTCTGAAGGTTTTGCCTATTCAATAGTTTCAGATGGCTCAGTAGTTCACTTGATTGGAAACTCAATCCAGATTTCAGCAGAGGAAGCGTCTAGATTGATTCAACGTCATGAGTTCTGTTTAGCGGAAGTCTGTTTGACAAAAATTCAGTTTGAAACAGTCGCTGAAGCATTTAACTGTTTGAAATCTTAGGCTAAATAAACAT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3241814-3241427 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046791.1 Vibrio navarrensis strain 2462-79 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3241813 28 100.0 32 ............................ ATCTGCATCTTAACAAATGTGCGACCGTCATT 3241753 28 100.0 32 ............................ ATCAGCATGTTTATCAGTCTTATTCAAATATA 3241693 28 100.0 32 ............................ TTTCTGATGATATGTTATTTACTTTCTATTCT 3241633 28 100.0 32 ............................ TATGGCTGGAACGGCTTACTTGCACTCTTTGG 3241573 28 92.9 32 ...........T.T.............. GTGCTTTTCGTCTTTACCACCCCACTTAAGAT 3241513 28 92.9 32 ...........T.T.............. TAGAGGCGGATTCGAACCCCCGACCTGATCAT 3241453 27 96.4 0 .......................-.... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 97.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAACGGGATATGCAGCAAAAAGCAGTCCTATGGGCAGCAAAATCCGGCAAACCGCTAGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGACAAAAACAGCAGGTTCCCGCTGTTTATTGAGATGCAGCCACAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGCCAATGTTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAAGAGTAGTTTTAACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATGGTTGCAACAGGCGGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : AGCAAAAACGCCACGAGCAAAGCTGGTGGCGTTAACATCAATTCTAATCTAATCATAGCAATCGAGCATTTTAGATGCGCCCGTATCCCAAGCCGTACCCAGAGCGATTTTTGCTACAATTAAAAACCGTTTAAACCTTTATTTAATGCGCTCTAACATCACACCCGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGAGCGAAACGAGTAATGGTGTGGGTTTCGCTCAAGATTTCGAGGTTCTCGAGCAGGGTCTCTGGGTTGCACGAAATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCTACATCCATACCTGCGCGCGGAGGATCGACAAAAATGGTGTTGCAGCGGTAACTCTTAAGATCGATGCCATGGTCTTTAAGGCGACGGAATTCACGTTTGCCTTCCATCGCTTCGGTGAATTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //