Array 1 4317033-4317207 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLIP01000001.1 Streptomyces libani subsp. libani strain NBRC 13452 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================ ================== 4317033 31 100.0 44 ............................... GACCGAGCCCGAGGACACGGGCGGTGACGGCGGCACGTACTCCG 4317108 31 96.8 38 ...................C........... GACGTCCGAGCCGCCGACCTCTCAGCCGCCGACCTCTC 4317177 31 93.5 0 .........................G..C.. | ========== ====== ====== ====== =============================== ============================================ ================== 3 31 96.8 42 AGCCGCCGACGGAGGAGCCGAGCACTCCGGA # Left flank : GGTGGCGCCGTCCCAGGTCGCCGACGCGGTGCCGCCGGAGCTGGACGGCCTGGTCATGCGGTCGCTGGCGAAGGACCCCGACGACCGCTTCCAGTCCGCCGAGGAGATGCGCGGCCTGGTCCAGTACTCGCTGCAGATGCTGCACGAGCAGGGCGGCCACACCGGCACCTGGAGCACCGGCCCGGTCGCCATGCACGAGGGCGGGCTCACCCCGTCGATGGGCACCGCGGCCACCACGGCGCTGCCGCACCCCGACGCCGGCCAGACCACGGCGCAGCCGATCCTGACGCCCGGTAGGCGCGACGACGACGGCGGTTTCGACGGCGGGCCCCGGCCGTCCAAGGGCGGCCGCGGCAAGATCTGGCTGATCGCGGCGCTGGCGGTGATCGCCATTGCGGTGGGTGTCGCCTTCGCGCTGCAGAACACCGGCGGCCAGGACCAGAAGCACGAGACTCCCACCACGCAGTCGCCTTCGCCGTCGCAGGACGACAAGACGAGCG # Right flank : AAGAGCCGTCGGACGAGCCCACCGATCCCACCGAGCCCACGGACCCCACGGGCGGGACCGACGACGGTGGCGCGGGCACCGGTGGCCCGGACAGCGGCTTGACGTCGGGCGCGACCGGCTGACGGGTGCCCCGCTCCCCGTTCAGCGGGTGAACGCGTTCCGTACGGCCCGGTACTCGCGGGTCCACCACACGGCCAGGGCGGCCGCCGCCGGGAACTGAGGATCGGTGCGGCGGTCGCCCAGCTGGTAGCGCCAGGTGAGCATCCAGAAGTCGTTCAGCCGCTCCCACCACACCCGGTGGACGGCCGCCGCGAGTTCCTCGGCACCGGCTCCGCAGGCGCTGCGGTAGGCGCCCGCGTACGCCGCCACCTTGGCCAGGTCCAGGGTGCCGCAGGGGCGTACGAAGAAGATCGCGGCGGCGCGTACCGCCTCCTCGGCGCGCGGCTGGACGCCCAGCCGGTCCCAGTCGACGATCGCGGTCGGTTCCGTGCCCCGGTAGA # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCGCCGACGGAGGAGCCGAGCACTCCGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 425432-431796 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLIP01000002.1 Streptomyces libani subsp. libani strain NBRC 13452 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================================== ================== 425432 37 62.2 37 CGC.GC.GTCG..C..A.....A...A.A........ TTCGGAGGCACCATGGAGCGGGCGCAGATCGGAACCA 425506 37 70.3 35 ...AA..C..T.....A.AA..A...AA.......G. ACCAGCATCCGCCGTACAACTTCCGGGTGCCAGCC 425577 37 86.5 35 .........A...C..A.......T.A.......... AGCATGGCTCGCAGGGTGTCTGACCCGCCCAGCTC 425649 34 81.1 37 .............C.---....A...A.........T GACTTCCCCGTCCTCCCCGAAGACGGCAACGCCGGCG 425720 37 81.1 37 .......C.....CT.A.....A...A......T... TCCGCGTCGGGCGTGACGGTGATGCCAGATGGCTGGA 425793 36 81.1 37 ........T....C..A.....AT..A.-........ GCCCGCGAAGTCGACCTGATGAGCGCCGAGCCCGGGA 425866 37 81.1 35 ............TCA.AA..A.....A.......... AAAGTGATGCATGGAACTGGCGGAAACGGGGGAAG 425938 36 56.8 33 ...A..A..T..TC.AACC....TTC.C..-...GC. CCGCGGTTACGACGGCCCCCAACCCCCCAGGCC 426007 37 89.2 6 .............C........A...A..G....... ATCACC Deletion [426050] 426050 37 56.8 50 .GAA.C.GAATT.C...AC..CA...A....T..... ACCGAGGATTGCAACAAGCAGCTGCTCGACGAGGCGGCCGTGTGCGACAC AC [426074] 426124 36 83.8 41 .........-T..G..A.....A...A.......... ACGGACAAGGTGACCTTCCCCACCTACGGCATCGGCGGCGT 426202 37 83.8 36 .C...C...C.TT.............A.......... GACGCGATGACACGACTTAACCGGGAAGACGGTGAA CA [426218] 426277 37 86.5 35 .C........T.........A..T..A.......... CTCCGGCGCTGTCCGCGATGATCTGCCGGTCTGTG 426349 37 91.9 38 .........A.....G..............C...... GAGAGCCGGCGCGAGGTTGCGCGTGAAGAACTGGAAGA 426424 37 97.3 35 .........................A........... ACCTGGCGACGATCAACGTGCCGCCTGTCGGTGGC 426497 37 100.0 36 ..................................... TGCTGGAGGCGAGTGACGAGCTGCGGGCCGAGGATC 426570 37 100.0 36 ..................................... ACCTGGTAGGTCTCGCCGATCCGGATGTCCGGGATA 426643 37 97.3 37 ..........T.......................... CTGTAGGCGATGGACACATGCGGGGCGAAGCCGTCCT 426717 37 100.0 35 ..................................... ATCTGGTCGACGGCGCGCTGTATCTGCGGGGCGTA 426789 37 100.0 36 ..................................... ACCTGGTAGGTCTCGCCGATCCGGATGTCCGGGATA 426862 37 97.3 37 ..........T.......................... CTGTAGGCGATGGACACATGCGGGGCGAAGCCGTCCT 426936 37 100.0 35 ..................................... ATCTGGTCGACGGCGCGCTGTATCTGCGGGGCGTA 427008 37 100.0 36 ..................................... ACCTGGTAGGTCTCGCCGATCCGGATGTCCGGGATA 427081 37 97.3 37 ..........T.......................... CTGTAGGCGATGGACACATGCGGGGCGAAGCCGTCCT 427155 37 100.0 35 ..................................... ATCTGGTCGACGGCGCGCTGTATCTGCGGGGCGTA 427227 37 100.0 38 ..................................... CCGTTGTGGGAGAAGCCCGATGCCAGGGTCGGCGTGGT 427301 37 86.5 35 .............C.G......A...A.....A.... TTGGTCATGACGCGGAACCGAAGCGACGCCTCGGG 427373 37 86.5 36 ...........A......C...A...A.......G.. ACCACAGCGTGTGCCGTCTACCCGGCCCGCCGGCCG 427446 37 83.8 37 ...........T.C.TA.....A...A.......... TAACAAGGCAGGCCCTGGGAGTAGCCGGCGGTGCCGA 427519 37 83.8 36 .............C.G..T...A...A.A........ CGGATTCTCCGCCGCAAAGTAGTGCTACTACGCCGG 427591 34 81.1 37 .............--.A.....AT..A.-........ GCCCGCGAAGTCGACCTGATGAGCGCCGAGCCCGGGA 427662 37 78.4 29 .....A.......CA.AA..AT....A.......... AAAGTGATGCATGGAACTGGCGGAAAGGA 427728 37 59.5 37 .G.AA...G..GA..TCCTT.AA...A..T....... GCGCCCCGCGGTTACGACGGCCCCCAACCCTCAGACC 427802 37 83.8 36 .....A.....G.......C..A.T.A.......... CTTTTCCGCGATCGGACCGAGGTGCACGTCGCTGTG 427875 37 94.6 32 ..........................A......T... CTGTGGACTCAGAGCAGGACGGCATGGAGCAC 427944 37 81.1 23 ....T.....T.T....AA.....T.A.......... CATCTACTGCCCGTTCTGCGCCT Deletion [428004] 428003 36 64.9 36 AC....A.G.A.-.G.A..A.A..G.A...C...... GGCATCATCTTCTGCGCGGCAATGTTCGGCGTTGTC 428074 37 81.1 36 ..A...C...T..C........A.T.A.......... TTGGGCGGCGGAATTCTTGGTGTGATGGGCGGAAGC 428147 37 78.4 36 ......A....A.C.A....T....CA.A........ TACACGACCGGCGACGAGTACGGAAAGAAGAGGACC 428220 35 81.1 37 ..............T--.....A.T....T..A.... TGGTGTCTGGTGACCTCGGGGTGTAGGCCCCCATGAG 428292 36 73.0 37 .C..T...TT..TCT.......A.-.A.......... TCCACCAGCGGTGTGGAAGCGTACGGGGCGGCCCGCC 428365 37 73.0 35 .....A.CT...TGT.A...T...T.A.......... GACAGGCGATCCTCCTACCTGCCGGTGTGAAGCTT 428437 37 78.4 35 ........T..G.C.T...A..A...A.....T.... AGGCGGTCAGTGAGGGTGGTGAAATACTCGATGGC 428509 37 89.2 38 T.........TT.......C................. GGCCTCGACAGCGACGGCCAACCCGTCACCGCTACCGA 428584 35 83.8 35 .......A......G.A.--......A.......... ATCGCGGTGGCTGCGGTCATGTTCTGCGGCGCCTG 428654 37 91.9 30 ..........T.A....A................... CGAGTCCGTCTGGGGCAACGCTCCGCCTCC 428720 37 75.7 38 .CCC...G...T........T.A...A.....A.... ACTGGCGAGGCCGCCGAGCGGGCCAGGGCCACGCTCGT T [428726] 428795 37 86.5 106 ....T.......GC.....T.........G....... GTCTCTGCCCGCGAGGACGCCTGGCACCGCCTCGGCAGTGGCGGTCGCTCCCTGGGACGGTCGAGGCAACCGGCCCGAGGCGCTACCCTCGATGCGCTGGATACCG 428938 37 75.7 36 ..........T..CG.A.AA......A.AG....... GCCTACTACGTCCACATCGCCGCTGCCATAGGCGAC 429011 37 86.5 38 .....A....T...........C...A........C. TCTGAGGTCTCCGGGGACACGTAGAAGCGGCTGCCGCC 429086 35 83.8 36 A...........T..--A........A.......... ATCAACACGCGGATGGTGGAGGGCGTCAAGTACGCC 429157 37 91.9 36 .G..........T..A..................... TCCTCGGTGACCGTGCTGACCGACGACTCCCCGTTG 429230 37 94.6 37 ......................A...A.......... GCTGCGGTGCGTGGCTCCTCCGAAACCTGGGTCAAGC 429304 37 83.8 35 .............C.T......A...T..G..T.... TTGCGTGGCATTGACGACGCGAACGTCCGCAAGGA 429375 37 83.8 35 .............C.T.A........A..G..A.... ACGGTGCAGGCCGCCACCATCCCCGGTATTCCCGG 429447 37 89.2 37 .............C.T..........T..G....... GTTCCCGAGCTCATTCCCGAGCCGCAGGATCTCGACC 429521 35 78.4 35 .......CGT...C....--......T..G....... CCGGCTATGACGCCCCACCGGGCGGCGACCGAGGT 429591 37 91.9 36 .............C...T..............T.... AGCAGCGGCGCCGGGGCCACGGTCGGGTACAGCACC C [429607] 429665 37 100.0 36 ..................................... CCGCAGGTCAGATCGAGCAACACGGCGAGCAACAAC G [429685] 429739 37 97.3 37 ........................T............ GCCGCGGCCGGCGCCTGCGCGGGTGGCCTGCTCGGCT 429813 37 97.3 35 ..........................A.......... ACCAGGAGCGGCCCCTCCGTCCGGTCACCGATGAC 429885 37 89.2 37 C...........T.........C.....A........ ATCATCTCCCTACGCCCGGACGCAGCGCTCAGCGCAA 429959 36 91.9 37 ...................-..A...T.......... GCCGTCGGATTCCTCATCCTGGTTGTCCGAATCGCGA 430032 37 86.5 12 .......C..T.....A.........A..T....... GCCCGCGCCGCC Deletion [430081] 430081 37 91.9 37 ..................A.T.....A.......... TTGTTACGCTCGATGCACAGTCGGCACGCCTCACCGG 430155 37 97.3 37 ..........................A.......... TCTGTCGTCCGGGGCCTCCCTACGCCGGCGCCTCATG 430229 37 97.3 36 ...............G..................... GCGTCCACCAGCTGCTCCAATGCCTCGCGGTACTGA 430302 37 100.0 36 ..................................... AAGTTCGTGCAGCGCCTCTTCCAGGCCGGCCGGCAT 430375 37 97.3 38 .......C............................. ACGTACCCCAGCCAGTGTGTGCCCGGGTGGACATCGCC 430450 37 94.6 38 ......................C...A.......... TCTGAGGTCTCCGGGGACACGTAGAAGCGGCTGCCGCC 430525 37 89.2 36 ............T..A.............G.T..... ATCAACACGCGGATGGTGGAGGGCGTCAAGTACGCG 430598 37 91.9 36 ............T....A......T............ TCCTCGGTGACCGTGCTGACCGACGACTCCCCGTTG 430671 37 89.2 39 .........A...........A....A.A........ GCCGCATGGTGGACGCGCTACGGCCGTGGCACCGCGCAG 430747 37 94.6 38 ................A.........A.......... AAGCACGTCGAGGTCACTCCCCAAATGCTGGCCATCCG 430822 36 78.4 35 .........AT..C.T...-......T..T......T CGTGGCGGTGACGCGGAGGAGATGGCCAACCGGGC 430893 37 67.6 36 T....AT..AT..CT....CA.C.GA........... TCTCGCCCGCCAGCCCTGCGGCGGCGACAAGTTCGG 430967 37 81.1 35 ..........TT.C.T......A...T..G....... TTCCTCGACGACATCCTCCGTGAGGAGGGAAGCGC 431039 37 91.9 37 .G........T...............A.......... GTGACCGCCTGCGTGGATACCGTGGCCGCCGAAATCA C [431057] 431115 37 83.8 35 .........C..AG......T.....A.........T GCCCCACATCGGCCGGCCGCCGGGGTAGCGGCCGA 431187 37 81.1 37 ...........G.CT.C....A....T.....A.... TTCAGTCGGCCGCGGGCCAGTACCCGCGCCTTGGCAT 431261 37 89.2 99 .........A...C.GA.................... CACCAGGGAGATCCCCTTGCTCGCCCCGGGCCATCGTGACGGTCGCCCTCCAAATTGGCCGAGGGTCACAACATCCTCTACGCCGGGATGGACTCCATC 431397 37 83.8 36 C.C...........T......A...CT.......... TACCGCGAACTGCTCGCGGCCGCGCCCGAGAACGCC 431470 37 86.5 38 ..........T..C.........T..A..G....... CACCCGAGCCAGTCCGCCACGCGCACGCTGGGCGGCGG 431545 37 83.8 31 ...........T.C.T......A...T.....C.... GCTTGCTGGGAGGGCTGGGACGAATTCATCC T [431562] 431616 37 81.1 36 ........T....CTA..A.......T........C. CAGGACCTGTCGGTCGCCGCGAATCCCCGGCGGCTG 431689 37 89.2 34 ...........T.C............T...C...... GTCACGGCCTTGAGCCAGAGGTCCGGAACCGGGC 431760 37 78.4 0 A..........TT...A....A....A........GT | ========== ====== ====== ====== ===================================== ========================================================================================================== ================== 87 37 86.2 37 GTGGCGGTCGCCCTCCGGGGCGGCCGGGGATCGCAAC # Left flank : ACCCGCGTCGCCCCCAACAAGCCGGAAGACCTGGCCAAGGGCAAGGTCACCGAGATGGGCAACAAGCACTACGTCCCCTACGGCCTGTACCGCGGCCACGGCTTCTACAGCGGAGCACTCGGCACGAAGGCGGACATCAGCTCGGAAGACCTCGAAGCCTTCTGGCACGCCATGACCATGATGTTCGACCACGACCGGGCTTCATCCCGCGGCGAAATGGCCCTCCGCGGCCTCTACATCTTCAGCCACTCCGACGCATACGGCCGCGCCCCCGCACACAAACTCTTCAGCCTGATCACCATCAAGCCGCTCGGGCACAGCGAAGCCCGCTCCTGGGACGACTACGCCGACCGAATCGACATTAACGAGGACGCCGTACCCGACAACGTCACCCTCACCCGCCTCATTGGCTGAAATCGCGAAACGCCTGCGGCAGACACCCATTCAAGACAGCTGGGATCGCAACCTGCGCCGCTCCCGCCTCGCACAGCCTGCGACAC # Right flank : TATGCCGGGCACCTGGGCAAAATACGGCGTCGACGGGTGGCGGCCGTCGAACTGGACCCCCTAGGAGTATGCCAAGTAGCGGTCGTCATTTCGGATGGCTGAGGACAACAAGGCTGCTCAGACGCCTCCAGTGACGGCACACCTCTGGGATTTTTCAGGGACTTTCAGCTCTGCCAGAGGGACTTCTGAGGGACTTTCGGCCGCCCAAAGCGGCAAGCGCGTGAAAGGCCGGAAAGGGCCTCAGACGCAGGTCAGAGGCCCTTTCCGGGGCAACGTCCCAGGTGGCGGCGGACGAGTCGGCCTGTACGCCGGGTTCTGACTCACGGCAGTTCGCCTACGGCAGACGTGCACGACTGGAGACCTACGCGGACACCATGCCAACGTACGGGTACAGGCAAAACCGCAGGTCAACGAGAGGATGATCCAGCATCATGGACCGCTAAGCCCGAGATCAGCAGCCGAATCTCAGAACCCCTCAGGCAGCCAGTACACGTGCTACC # Questionable array : NO Score: 4.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.31, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGGGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [80-85] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //