Array 1 2326907-2322675 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049801.1 Acinetobacter shaoyimingii strain 323-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2326906 28 100.0 32 ............................ ATCTCGTGAATACATCAACAAAACCACTGGAG 2326846 28 100.0 32 ............................ TGAGACTGCAACACAATTGATTGCTAAGCTTG 2326786 28 100.0 32 ............................ ATAAACACTTGCAATCATGACTCGTACTCATG 2326726 28 100.0 32 ............................ AGTTAGACGCAGTAACTTCCGCTTCTTCGGGA 2326666 28 100.0 32 ............................ TTACCATCCTGAATGGTTTTAATTGCTTTCGG 2326606 28 100.0 32 ............................ TGCAGCAGTTGCGCTTGTAGTTGTTCGCCACT 2326546 28 100.0 32 ............................ ACTTCGTCGTGTTCTTTCTCGCCAACGTAGAT 2326486 28 100.0 32 ............................ TAATGAAGCAACACCAAAGGTCGGTAAAATCA 2326426 28 100.0 32 ............................ CTTGATTCAATGGCAACTCGTCAAGCGTGTCA 2326366 28 100.0 32 ............................ ATGAGCTATTATTTTCAAATTTTGTAGTTTGA 2326306 28 100.0 32 ............................ TGCCCGTTTAAAATTGGAGATATTGGAATTAT 2326246 28 100.0 32 ............................ AAGCGATGACCATGCAAGCCACATGTCAAGAC 2326186 28 100.0 32 ............................ AAACATAAACTGCATGTTTCCAGATATACCAC 2326126 28 100.0 32 ............................ CTACAAAATTTTAGCTCCGATTCTTTAACCCT 2326066 28 100.0 32 ............................ ATCATCGTGATTTTCTCTCAATACAATCATTG 2326006 28 100.0 32 ............................ AAGGCGGTGCATTTCTTAATTCGCTAATTTTG 2325946 28 100.0 32 ............................ TGCAAAGTATTGAGTTTCATCATATCCTCTAT 2325886 28 100.0 32 ............................ TGGTTATCCAATTACGTTTTAGCAAAAAATAA 2325826 28 100.0 32 ............................ TTGGATTTGGATATATCCAGGTTGTGACAAGC 2325766 28 100.0 32 ............................ GCAATGCCTTGATTGAATCCCTCAATCTTAAT 2325706 28 100.0 32 ............................ TTTATAACTAAAATGCCACTCACCCTTAATAA 2325646 28 100.0 32 ............................ TTACACACTACGGCATTAGAATTTGTGAATCC 2325586 28 100.0 32 ............................ GCCAATTCCTACAAGACTTCATCAAACTAAAC 2325526 28 100.0 32 ............................ GTCATAATCTGGATCTATATCAGCAACAACAA 2325466 28 100.0 32 ............................ TGCTGATTATCAAATTAATTGGCAAACTCCTT 2325406 28 100.0 32 ............................ TTCATGCTACACGCTCCACAGCTGTTCCATTT 2325346 28 100.0 33 ............................ TATCATTGCTTCCCAAACATCACTATACTTAAA 2325285 28 100.0 32 ............................ GTAAGGACTATTTGGATTATAAATTTCAGGTA 2325225 28 100.0 32 ............................ AAGATTCGAAAAGGTGCAAATGCTGTCAATAC 2325165 28 100.0 32 ............................ CCACCCAATAACTCAATAATTTCGTTTAAACG 2325105 28 100.0 32 ............................ ATATGTTGCATGGCTGTCGCAATGGGTAAAAC 2325045 28 100.0 32 ............................ ATAGCCATCCAAGAATGAACGATTATTTTGAA 2324985 28 100.0 32 ............................ ATCAGCAAATTCCATCAAAATCGAAATCATAT 2324925 28 100.0 32 ............................ AATAATTGCAAAAATAGCGGCAGGCAAAACAA 2324865 28 100.0 32 ............................ TTGGATTTTGATCTATCCTGGTTGCGATAAAC 2324805 28 100.0 32 ............................ CACAGTGCCTTCAATGAATCCATAGTGTGCCG 2324745 28 100.0 32 ............................ TTTTGGGATAAATATAAATAAATAAATAAATG 2324685 28 100.0 32 ............................ TCTTGAAAGAATTGGAATGTTCGCAAGGGCAA 2324625 28 100.0 32 ............................ TTAAAGTATGCTGACGAAGAAACATTAATTGA 2324565 28 100.0 32 ............................ ATTCGCAGATAACAGGGAACCAATCACATGCA 2324505 28 100.0 32 ............................ AGCCAATGATTTTAATGCACTATCAGCACTAT 2324445 28 100.0 32 ............................ ACACTCGAAAGTTGAATGCAGATGAAACGTGA 2324385 28 100.0 32 ............................ TTCGTCCGCTGTTTGAGCTTCAATGCTACCAG 2324325 28 100.0 32 ............................ AGCGTGCTTCAGCGCAAAATCGTGTTGAAAAC 2324265 28 100.0 32 ............................ AAATAAGTCTGATCAAGGTGTGAAGAAGAAAG 2324205 28 100.0 32 ............................ TATTGTAGGGGGATTTATGCTTTTTTTACTTA 2324145 28 100.0 32 ............................ TTTAAAGAAGGTTTAAATTTCTCGTGTGACTC 2324085 28 100.0 32 ............................ TATGAAAGATAGCGAAATCATACACGCTATGA 2324025 28 100.0 32 ............................ ATTGACCATATATATTCACCGTAAGAATCTTC 2323965 28 100.0 32 ............................ ATGAACACCTAGACGTACCATTGTTGCAACAG 2323905 28 100.0 32 ............................ TTTAAACCATTCAATATTCTCTGAATGTATAT 2323845 28 100.0 32 ............................ CACCAGATGATGAGAATATTCAGCAAGCATTT 2323785 28 100.0 32 ............................ GCTACGTGTGGGCTATATTGATGGTGACATTA 2323725 28 100.0 32 ............................ ATTTATTACACTTAGTACCTTACGCTGTTACT 2323665 28 100.0 32 ............................ ATAACCCTCACTTATTTAAATATATCTTTATT 2323605 28 100.0 32 ............................ AGTTGTTACCGTTGTATCAACAGAATTAACAC 2323545 28 96.4 32 .........T.................. TTACTCACATTTGCTTTATTCGTAACTTCTGT 2323485 28 100.0 33 ............................ CAACGTAATCCATTGATAATCAACGGTGGATTT 2323424 28 100.0 32 ............................ GAAGTCAGCTCAAGCTATAGTGAATAAACAAT 2323364 28 100.0 33 ............................ AAAATAAAATTTTAAAATCGATCATTTCTGTCA 2323303 28 100.0 32 ............................ AAAAGGAGAAATCTATTACTATAAAATTATAG 2323243 28 100.0 32 ............................ AAGATCATTGCAAGCAGTGATATAGCCTTGTG 2323183 28 100.0 32 ............................ AGATATAAAGTCAGGCGCATTAGTAACTTTTG 2323123 28 100.0 32 ............................ AATACAAACGGTATTCCACCGTTGCAAAATCC 2323063 28 100.0 32 ............................ AGTTGATAAATTCCCGAACGACACGCCATTCC 2323003 28 100.0 32 ............................ TTTCTAGACGCTAATACTATGGTTTTCATTTA 2322943 28 100.0 32 ............................ TACCTCATAGTCATTGGTTTTATACAGTACAG 2322883 28 100.0 33 ............................ TTACCTACACTTTTTTTGACAAAACCCTCGATT 2322822 28 100.0 32 ............................ GTTATGCGATACCAGCTCGCTTTCTTTCCAAA 2322762 28 100.0 32 ............................ AACAGTCACAGGTGGCGTGGTTACATTACCTA 2322702 28 85.7 0 ............G.C..........TC. | ========== ====== ====== ====== ============================ ================================= ================== 71 28 99.7 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : GCTGATTTGAAGAAATTGGACATTCGACGCTGGCTTGAGCGTTTAGAAGATTATGTGCATATTACTTCTATTCGTGAAGTGCCTAGTGAAATCAAAAGTTATGCCATATTTAAACGTCAACAAGTTAAAACAAATGCTCAGCGTTTAGCACGTCACCGTGTAAAACGTGGAGATATAGGTTTTGATGAGGCATTAGCACGTTATAGCCAAGTTGTAACAACAACGGATTTGCCTTATATCCAAATGAAAAGCTTAACGTCTGATCAGCCTTTTAAGTTGTTTATTAAAAAACAAAATGCTGAAAAATCTGAAACTCAGGTTTTTAGCACTTACGGATTAAGTTCAGTGTCATCTGTACCCGAATTTTAACCCAATATTTTTATACTCTTTAACAATTTAATAAAATCAATAGGTTATAATAGTGGTTTGAAACTTGGGTCTTATAGTAGATTTAAGGTTTAAGTCATTGTTATAGCTTTATTTTTTGCTTTAAAATTACT # Right flank : CTTATTCTGTATATTGTTTTTCATGTGTATGATGAATAGACATTAATTTAAGAAAAAGGAAGAGCAATTGCTCTTCCTTTTTTTTTGCTGATATAGATGACCAATCTCAATATCTGACATTATTCAAACTTGATCATTTTTTCCAAGAGCTAAAATTATTTGTTTTGTCCCAAACTGGTAAATTTATCAGGTACAATCACCATCGTATTTAAAGTGCCTTTTTCAGCAGCTTTCAGCAAAGCTTCTGCTTTAGTTTTTTCAGCTTCAGCCCGCAGTAAATCCACATATTTATCAGATGCATTTTCTGCCAAAACTTTTTTAATTTCTGTTTCAACACGAGCAGTTTCAAGCTCATTTTGCTTGGTTTTTAATGCATTTTGAGAGTTCACAATTGCCAGTGATGAGTTCAAAATAGACTGAGGCGGAGATACCTTTAAAATGTTAATTTCATTGACTTTAACAAAGCGATCTTTATTTTGAGACTTTAGTTTTGAATTGAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //