Array 1 3184108-3175794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066783.1 Comamonas sp. CJ34 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3184107 28 100.0 32 ............................ GAGATAAAGCGAAACGAGCATTAACCAACCCT 3184047 28 100.0 32 ............................ TTGATGTGAGCAACGCGGTCTTCATGAGTCAT 3183987 28 100.0 32 ............................ GCTGGTCCAGCTCTGGCAATGGCTCAGGCCAC 3183927 28 100.0 32 ............................ AATTGGGCAATGGTGCCTAAGCGTTTGCCGGT 3183867 28 100.0 32 ............................ GCCTGTCCAGTTGCCGTCGTCTCGCGGGTCTA 3183807 28 100.0 32 ............................ CAGTTGAGCTGGGAGGGTGGTGGCTCGCGCAT 3183747 28 100.0 32 ............................ TCGCAAGGCTGAAAAAGCAAAGCGCCCCGATC 3183687 28 100.0 32 ............................ TGGCCGTCGATCTGCCCGACAGTCAGAACGGC 3183627 28 100.0 32 ............................ TTTCCCTGCGAGCATGATGTCTATTTCATAGT 3183567 28 100.0 32 ............................ AGACCCGGAAAATCGAATCCCGTCTGACTGCT 3183507 28 100.0 32 ............................ TCAAACCAGGGAGGCTGCCCAGGTGCAGCAGG 3183447 28 100.0 32 ............................ GTAAGCGTTCCCATGCCCTTCCAGAGGGTCTT 3183387 28 100.0 32 ............................ AAGGGTTTTGCCGTTGGACTTGGTGCCCATGT 3183327 28 100.0 32 ............................ AAACGCTCAGACTCTGACCCTGAGCAGTCCAA 3183267 28 100.0 32 ............................ ACCCGCAGAAAAAAGCGATCCCGTCGACAAGC 3183207 28 100.0 32 ............................ ATTCACAAAACCCTTGAAGGCTTTGAAGCCTG 3183147 28 100.0 32 ............................ TGCCACATGCGATAAGTGGACAGCACGGCCTT 3183087 28 100.0 32 ............................ TGTACATGCTTTGGCTGTGGGTCCATCAACAT 3183027 28 100.0 32 ............................ AGGCTGCTGCTGCAGCTGGCGCTCTGGTTGCC 3182967 28 100.0 32 ............................ AAGCTGCAGAGAAGATCAAAGACACCGAAATT 3182907 28 100.0 32 ............................ TCGATACATCGTCTCTAAAAGGCATTGCAGAC 3182847 28 100.0 32 ............................ TCCAAAGATCAAGCGGCGAGCAACGATCAAGG 3182787 28 100.0 32 ............................ ACACATCGCGCTCACCATCAGGCCAGAAGGCC 3182727 28 100.0 32 ............................ TTCATGTGTGAACTCGACGTTGAGCGGGTCAG 3182667 28 100.0 32 ............................ GTTGAGCAAAACGCTGCTAAAGCGGAGCACTT 3182607 28 100.0 32 ............................ CAGATCCAACTTGGTGGCGAAATGTCGTGCAC 3182547 28 100.0 32 ............................ AGTCCGAATTCCAGCTGGCGCGATGCTTGGCG 3182487 28 100.0 32 ............................ ATTGCGGCTCCTTTCGATAGCTGGCAGCTCGT 3182427 28 100.0 32 ............................ TCAGGAAATCGTCAACGTCGCTCAGCTATCGG 3182367 28 100.0 32 ............................ TTTTTGACGTCACCAGCGAAGACCTGAAAGAT 3182307 28 100.0 32 ............................ GTTTATGTATCTTATGTTTAATCGCAAATGCT 3182247 28 100.0 32 ............................ AATCAAGAATGTCTTGCTCAGACATCTTCGAC 3182187 28 100.0 32 ............................ ATTCAAGTTCGGTGACTCCACCGAGATTGAAA 3182127 28 100.0 32 ............................ AGAGTCGATCACGATGGGCTTGTTATCCGTTC 3182067 28 100.0 32 ............................ TGCATAGGTCAGCGTTAGCATCCAAACACGTT 3182007 28 100.0 32 ............................ TGTTGAAAAATAGCCCAATGATGGGTGATTCG 3181947 28 100.0 32 ............................ TCATTGAAGTGCGCAAGGCCTGTGTTCCGGTG 3181887 28 100.0 32 ............................ GCGACCTGATTTCCGGGCTGGCAGGGGTTTTC 3181827 28 100.0 32 ............................ AAACCGAACCCCAACGCCACCGACTGGCCGAT 3181767 28 100.0 32 ............................ ATTGCATCGCCCAGCTGAGCTGGGAAGGCGGA 3181707 28 100.0 32 ............................ ATGTAGAGCGCTGACACACGCCCCTCAGCATC 3181647 28 100.0 32 ............................ TGGCTGCACGCGGCACCTCCCGCAGTTACATG 3181587 28 100.0 32 ............................ ATAAGGCGACAGAGGAACTAACCCAGTTCGTC 3181527 28 100.0 32 ............................ ACTGATGCGAGCGCCATGCGGAAACTTCCCTT 3181467 28 100.0 32 ............................ ATATTCGGGTGATGAAGGCCCATTTCTTGGGC 3181407 28 100.0 32 ............................ TTACGGCCTTTTTTCAGTGCTGGCAGCACATG 3181347 28 100.0 32 ............................ TCGTCGTTTCAGCCTGCAAATGAGTTCAGCTT 3181287 28 100.0 32 ............................ ATGCGCTGGGTCATCAGCAGCACATCAGCACC 3181227 28 100.0 32 ............................ CTATGCGTCGCCCACTATGGGCTGCATGGTTC 3181167 28 100.0 32 ............................ TGACCTTCACCGCACTTATCTGGCGGTATCTC 3181107 28 100.0 31 ............................ TGCCGGGTTGGGCATCACCCCTCAAAGCATC 3181048 28 100.0 32 ............................ TTGCATTATTCAGTGCGTTTCTCGAGAGCTTT 3180988 28 100.0 32 ............................ TTCCGGTCGCTGACTGAGTCGATTGAAACCGA 3180928 28 100.0 32 ............................ AGGACGATTGCCGGCGGCGCTGTTTCTCTCTC 3180868 28 100.0 32 ............................ GGCAGATCGTTGTGGCATTCATCAATCAGAAA 3180808 28 100.0 32 ............................ GATAGCGGAGATAGCTGTCACGCCACCTGTGA 3180748 28 100.0 32 ............................ AAGGGCAAGGACGGTGAGGGTAATGATGTAGA 3180688 28 100.0 32 ............................ TCAATGGAGTGTCCGCCTGGGTAGACAATTTT 3180628 28 100.0 33 ............................ ATCGGGCACCATCTCATCACAGTAATTTGCGAT 3180567 28 100.0 32 ............................ GTCACGCTCAAGAAGGCACGCATCGAAGGCAG 3180507 28 100.0 32 ............................ TTGCCCGGCGCTTGGTTCCAGTACGTGCATTC 3180447 28 100.0 32 ............................ ATCGAAAACGCGTTTGGCCATGAAGTCGCAAG 3180387 28 100.0 32 ............................ AAGTCCCGGTCTTCGGTTTCGCGTGGAATGCG 3180327 28 100.0 32 ............................ GAAGCCTGAAGACAAGGCGCTGGTGACGCAAA 3180267 28 100.0 32 ............................ CGCCCTTACGCCTTCTTCACACCACGCTTGCC 3180207 28 100.0 32 ............................ AAAATGTTTGTGGAGGTCTTCAAGGCAGCATG 3180147 28 100.0 32 ............................ TCGGGCAGCACGTTGACGAGCCCGAAAAACTG 3180087 28 100.0 32 ............................ GTCAAGCGCCCTGCAAAAGTTCCAGTGACCCC 3180027 28 100.0 32 ............................ ATCTCGGGCAGCAATCCAATCAAGAATGTCTT 3179967 28 100.0 32 ............................ CTATTGGCACTGGGGCAAATGTCACTGCTTCT 3179907 28 100.0 32 ............................ AGAATCCAACAAGGCACATCAGTTATGAGATC 3179847 28 100.0 32 ............................ AAAAGGGCAGTGCGAATTTCGGTGTCTTTGAT 3179787 28 100.0 32 ............................ AGTCGCTGTAGAAGTCCCACACAGTGCCGAAC 3179727 28 100.0 32 ............................ TAAGCCTGATGTGGACGTCTGGGGCAATAAAA 3179667 28 100.0 32 ............................ ATCAAAAGCAGAATGTACTTACAGGTATCCCA 3179607 28 100.0 32 ............................ ACATTTTTGTAGACACCCGAGATGGCCAGATA 3179547 28 100.0 32 ............................ ATGAGATTCGACCGAACCTGGGCATTGCGCAT 3179487 28 100.0 32 ............................ TCAAAAGCCGCTGCTGCTGCAACTACTGAAAC 3179427 28 100.0 32 ............................ TGGCAGAGCAGCTCATGCCAACGTCACTCAAT 3179367 28 100.0 32 ............................ ACCGACTGGCCGATGCTTTGAGGGGTGATGCC 3179307 28 100.0 32 ............................ TTGCTGGATCTGGGATACCTGCAAATACATCT 3179247 28 100.0 32 ............................ CATGTTGTGCAGCTTGGTCGCCTTGAAAGTCA 3179187 28 100.0 32 ............................ ATTCCCCAGATCTACCAGGACTGGAAGCGTGA 3179127 28 100.0 32 ............................ AGGTGGAGGGCACCATTCCCCAGATCTACCAG 3179067 28 100.0 32 ............................ TTGTGCGCGATAGCGGCGCAGTGTCGATGGGG 3179007 28 100.0 32 ............................ TCTGGGGGGCGGTACTGCCGTTGTTTCTCAGG 3178947 28 100.0 32 ............................ AACGGCAAAACCCTTGGCGTGGTCACGCGCCC 3178887 28 100.0 33 ............................ CTGTGAGCTGAAGAATGCTCCTGTCCCGGTTGC 3178826 28 100.0 32 ............................ TGCTGGTGCGTTCGGTGCATCGCAAGTAACCG 3178766 28 100.0 32 ............................ TTGGAGATATCGGCCATGGTCGCATGCTGCTG 3178706 28 100.0 32 ............................ AAAGCATCAGAGATTGGCACAACACGCTTGAT 3178646 28 100.0 33 ............................ GTTCCCCTGAGTTCTTCGCCGTGCCTTTAGCGG 3178585 28 100.0 32 ............................ TCAGATGCTCAGCAAACTCCTCCTGAGACAAA 3178525 28 100.0 32 ............................ CAATGTACGCGACGACCTCACGTCCTTTTTTG 3178465 28 100.0 32 ............................ TGCCCCCAGATGCGCTTGAGGTGACGATGCCA 3178405 28 100.0 32 ............................ AAATCAATCGCTTTCCACGATGACAGCTCACC 3178345 28 100.0 32 ............................ GCAGTTTCAGCAGCAGGCCACCATGGCCGACA 3178285 28 100.0 32 ............................ ACCGGACTTGACACGTTCTGCCTGCAAACGAA 3178225 28 100.0 32 ............................ GTCGCACAAAGGTGCTCCGCATCTTGCGCGAC 3178165 28 100.0 32 ............................ CGCAGGGCCAAAGCCCGGTTGCCGCGTATGCG 3178105 28 100.0 32 ............................ TTCCACATGAGATAGGTGTGCAGCAAGGCCTT 3178045 28 100.0 33 ............................ GTTCAGGACTTTGCCGCGCTGGGCATCACGCCT 3177984 28 100.0 32 ............................ ATGCTGAAACCGATGTTGATGGACCCACAGCC 3177924 28 100.0 32 ............................ TTCGGTTGCATCTGGCAGGTCTTCGACCCATT 3177864 28 100.0 32 ............................ TGTACAAAATACAACACAATTTGCTTTAACAG 3177804 28 100.0 32 ............................ AGAAAGGCAGCTCATCATGGCAATCGCAGCAA 3177744 28 100.0 32 ............................ TTGGTGGAGTCGTAGCCAGTGCCGTTTTCCAA 3177684 28 100.0 32 ............................ TCTGTTTTCTCTGAAGTCTCAGAACTAATCAG 3177624 28 100.0 32 ............................ TGCTCGAAGAAAGCTTCGCCGATCACCTCAAT 3177564 28 100.0 32 ............................ TTTCGGGAAGTTTCAGGGCTACAGCGTGGTAA 3177504 28 100.0 32 ............................ AGAACTTGAAGCGGTAGGCCATGAAGCGCAGC 3177444 28 100.0 32 ............................ TGGCATTGATGGTTCAACAGAACCGGCAGACC 3177384 28 100.0 32 ............................ GTCATCAGCGACTTTGACTGCCCGTTGCAGAA 3177324 28 100.0 33 ............................ CTGGTATGTGTGCCAAGAGTGCGGCAGCCACAT 3177263 28 100.0 32 ............................ TGCCTGTGCCTGCTGAGCTGAAAGGCGCATGG 3177203 28 100.0 32 ............................ AGTTACGGTGCCGGGGCGAGTGTCGGAGAAAG 3177143 28 100.0 33 ............................ AAAACGGGCTTCATGCGCGCACCCCGGCTTCAA 3177082 28 100.0 32 ............................ CGGCAGAACCGGGAATCCTCTGAAGGAGCACA 3177022 28 100.0 32 ............................ ATAGGAGGCCATATGCAGCATTCATCTGTAGT 3176962 28 100.0 32 ............................ TGTTTTTGCTGATCGCCCTGCTTTCATGCTGC 3176902 28 100.0 32 ............................ AAGGCTTCGGGAACTGATACGGCGGCTTCAAA 3176842 28 100.0 32 ............................ ACCAAGGTCACCGCCCTGGCCGTGGTCATCGT 3176782 28 100.0 32 ............................ AATCGTTTCAGCAGAGCCTGTGCACTCTCGCC 3176722 28 100.0 32 ............................ ATTATAGAAAGCAGTTCCGCACGCCTGTTCAA 3176662 28 100.0 32 ............................ GAAGAGCGCGGCACGCGCACAAAGCCAGAGTC 3176602 28 96.4 32 .....T...................... TTCCGCCACCCCGCCCCCAGGCACACGAGCCA 3176542 28 100.0 32 ............................ AGCAAAAAATTCGTCGCAACGGGTAACGATGT 3176482 28 100.0 32 ............................ TGCAAGTGATTCTGAAGAGATTTGCGCCTGGC 3176422 28 100.0 32 ............................ TCCGCCACTCAGTACTAGGCAGGCCATCTATT 3176362 28 100.0 32 ............................ AAGGACTATGCAGACGCTCCAAAGGGCTCTGA 3176302 28 100.0 32 ............................ GTCGCTGGGTTCTGTGGCCTGCGTATGTGCAG 3176242 28 100.0 32 ............................ AAGAGCACCGAGGCCAGATCCACCCATTGCTG 3176182 28 100.0 33 ............................ ACATCGCGCTCGCCATCAGGCCAGAAGGCCCAA 3176121 28 100.0 32 ............................ AGGAAGAACACCAGGCCAAAGCCGAGCGCGAC 3176061 28 100.0 32 ............................ TGCCATAACGGGCTGTTTAGTTGCAGGGGCTG 3176001 28 100.0 32 ............................ TGCCATAACGGGCTGTTTAGTTGCAGGGGCTG 3175941 28 100.0 32 ............................ TATTGCCAAAAAATGGGTGATGATATCAAGCC 3175881 28 100.0 32 ............................ AAAGTCGATCGCACAGAACATTTCAGGAGCGA 3175821 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 139 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GGCACTGCAGGCGCTGATGGCGGAGCCCTGGCTCAAAGGCATGCGCGACCACGTGCAGGTTTCTGACCAGGCCGCTGTGCCAGCGGATGCGCAACACCGCATGGTGCAGCGCCGCCAGTTCAAAACCAACGCCGACCGCCTGCGCCGCCGCCGCATGGCCCGCAAAGGCGAAACCGCTGAGCAAGCCACAGCCGCCATCCCTGACACGGTGGAACGCAAACCCAACCTGCCGTTTGCGCAACTGCGCAGCAGCAGCACCGGTCAGCCGTTTTGTCTGTTTGTAGAGCATGGTGCCCTCCAGTCGCAAGCTGTGGCGGGTGACTTCAACACCTACGGCCTGAGCCTGAGCGCGACAGTGCCCTGGTTTTGACCCTTTTTCTGGACCCCATCGTGGCGCCCAGAAAAATCAATGACTTAGCCCTCACTCCAAAATTTGGGGTGAGTGGCTGGTTGTGGCTTTAGTTCCTTAAAAATCAATTTGTTGAAGGATTTAGAATCCA # Right flank : ACAAGCCGCCAATGCAACCAGTGGAAATAGCCGTTCGCTGTGAATCGCCCCGGGTTTTCTAGACACTTCTGAGCCTCAATCCCGAGGCCCAATAGGAGGTGCCATGAGTAAGCCTAAATATCCAGACGAATTCAAGATCGAAGCCATCAAGCAGATCACACAACGAGGCCACAAGGTCGCTGACGTGTCACAGCGCCTTGGCGTTAGTCAACATAGCCTGTATCAGTGGCTGAAGACGCATTCAGGGCCTCCCGCAGAGCGACAAGCTCAACTTACGCAGACAGAAGAGTTGCGCAGACTAAAGTCCGAGCTCAAGCGTGTGACCGAGGAGCGTGACATCCTAAAAAAGGCCGCAGCGTACTTTGCCAAGCAGCTCGGGTGAAGTACGCATTTATTCAGAAACATGAGCACGAATACAGCATTCGTAGCATGTGCAAAGTCATGGTGGTACATCCCAGCGGGTATTACGCTTGGAAAGCTGAACCCGTCAGCCCACGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //