Array 1 33277-33701 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NVDH01000010.1 Bacillus thuringiensis strain AFS061760 AFS061760_73_H2_Contig10_140411, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	================================	==================================	==================
     33277	    32	  84.4	    34	......T..CT.GC..................	AACCAATCGAATATAAACGTGGGAAACCGAAAAA	
     33343	    32	 100.0	    34	................................	GTGACGGATATAGAGACAGGTGAAAAAACAAAAA	
     33409	    32	  96.9	    33	...................T............	CTTAAAGAATACTATGAAATTGAAAGAAGTACA 	TG [33432]
     33476	    32	 100.0	    34	................................	TTTAATACGGCTAAAGATTTACTAGCTGGATTAA	
     33542	    32	  96.9	    30	....................A...........	AGTAGACAGAAGATGAAAGAAGATTTCTTT    	
     33604	    32	  90.6	    33	...A...............G......C.....	CCATTAACAAAAATATAAAAAGCATACGTGCCG 	
     33669	    32	  78.1	     0	....T....C.......C......T.A.G.C.	|                                 	A [33692]
==========	======	======	======	================================	==================================	==================
         7	    32	  92.4	    33	GTCGCACCTTATATAGGTGCGTGGATTGAAAT	                                  	       

# Left flank :   TGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCCTGGGAAAGATAAAGGTTCAGATACGATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACGCAATTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAGATTAAAAATGCACTGGTTATACTGTTTGAAAATGATGCATCAGCAGCACGACCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGGATCATAAATCAAAAATTGGTCAATACTCCTCTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGACGAACCAAAAACAATCGATGATTATACTGTATTGGTACATGAATTAGATGATTTAAAAGTTGAGGTTATTAATGGAATGTAATAAAAAGCGTCAGAATAGTTGAACGAAAGTATCCTTATAAAGATATACTTTATCAATTTATTAAAGGAAA
# Right flank :  TGGTAATATGCTTGATAGTAATTTAGTGTCTCTGCTGGAGTAAGAAGAACTGCTTCAATTCATACAGCAACTAGTGTTGATTCAATTGACATTACTAGTATGCAGATTATGAAAAGTATAAATTTTGAGCCTGAGAAGGATAAAGGTTCAGATACGATGGGATGAAGCATCGTGTTGATCTTGGAGCTTATATTTTTTACGGAAGTATTCATATGCAATGAGTAAGAAATACAGATTTTACCAAAGGTGATGCGGAAAATATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGTATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGCTTGTTGGTGGAAGCATAATTCAAAACTTGGCCAGTACCATTCCGTAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTAACGAACCAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATAGTTTAAAAGTGACGATTATTGATGGAC

# Questionable array : NO	 Score: 8.44
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTTATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.25%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.10,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [5-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [10.05,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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