Array 1 1038988-1034166 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031230.1 Sporosarcina sp. PTS2304 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1038987 33 100.0 35 ................................. TACTGGAGATAATTTTAAGCGGCACGCCACAGAAG 1038919 33 100.0 34 ................................. CCGCAAAATCAATCACATCTATGCCGCCTGCGTG 1038852 33 100.0 35 ................................. AGTTTTACCAGGATACAGCCGGGTACCGCGCCCGA 1038784 33 100.0 34 ................................. AATCGTGTGGAGTTCGAGGGCTATACATATAACT 1038717 33 100.0 34 ................................. TGCTAAAGTTGGTAGATTTTCGATTCCGATCTCT 1038650 33 100.0 34 ................................. ATCGTCTTACCTCCCCTGGCCAATATTTATAACC 1038583 33 100.0 35 ................................. TACCTACTTGATGGCGGCGAAATAAAAAATTTAAA 1038515 33 100.0 35 ................................. AAAAAAATGAACGCCGAAAAGTTGGAAATCGCAAA 1038447 33 100.0 34 ................................. GAAAATTCGAGCTAAAGGAGAGTGTGAGATTTTT 1038380 33 100.0 34 ................................. AAGAAAAAAGGTAGCACAGAAATCGAAAAAGTTT 1038313 33 100.0 35 ................................. ATATTTGCCCGGCTTTGGTAATTCAAACCCTTTTA 1038245 33 100.0 35 ................................. ATCTGTTCACGGTGATATTGCTGGATCAACCCTTT 1038177 33 100.0 35 ................................. ACAAGTTAAAATAGATGAATTATTAGATCATGTTG 1038109 33 100.0 35 ................................. ATTACGCTGTTTGATCGAAAGCAAGCATCTGTTAA 1038041 33 100.0 35 ................................. GACCACTTCATCTCCGAAATCTGCCTCTGCCGATG 1037973 33 100.0 36 ................................. CTCCGGCTATCTACATTGCCCTTGCAGAACCGACTG 1037904 33 100.0 34 ................................. TTCTCCGTCGATACCGTATTTTCTGATATCTGAT 1037837 33 100.0 36 ................................. CGATGAATGAGTTACATCGAAAGGCTTGGGATTTGC 1037768 33 100.0 33 ................................. GGTAACATTGTAAATAGATAAAATACCTTTCAA 1037702 33 100.0 34 ................................. CGACTGAGTGGTTTCTTTTTACAACTGTATTGGT 1037635 33 100.0 33 ................................. AGTCGATCGAGTTGGGTGATACGGTGCGAGTAA 1037569 33 100.0 33 ................................. GCTTTACTGTTAGATAACTTCGGTGCTACCTTT 1037503 33 100.0 36 ................................. TACTAATAAATGATTTTGCTTTTCCGATGATAAAGC 1037434 33 100.0 33 ................................. ATTACAGCTTGTCTAATTGTGCCTGTTTTATAT 1037368 33 100.0 34 ................................. AAATATAGTTTGTAAATATGTAAAAAGAGTAACC 1037301 33 100.0 34 ................................. ACTTTGCAGGCAACATTGCACAGCTCTTGCAGGT 1037234 33 100.0 36 ................................. CGAACAAAATACGACAGAAAGGAGTCAGCAACATGG 1037165 33 100.0 35 ................................. CAAGACTTCGCTTTCGCGCGTGCGTCTGCTGGGCC 1037097 33 100.0 35 ................................. ATCGTGTACGTGCATAACAATTCGGTAACCTGCTT 1037029 33 100.0 35 ................................. TCTAGGGAATGGTAACGATGATAAACGACTAAGAG 1036961 33 100.0 35 ................................. CGTGACTAGGAGTCATAGGGTTAGGGCTGAACGAC 1036893 33 100.0 35 ................................. TCTAGGGAATGGTAACGATGATAAACGACTAAGAG 1036825 33 100.0 35 ................................. CGTGACTAGGAGTCATAGGGTTAGGGCTGAACGAC 1036757 33 100.0 34 ................................. AACCATAACTGGGACAACGTACTAGGACGCACAA 1036690 33 100.0 34 ................................. TAGTGTCCATGTATCCGTTGCGTCATCCCAATTG 1036623 33 100.0 34 ................................. TTCCTTGCTGATGTATAGATGTTTATGGTCCTCT 1036556 33 100.0 34 ................................. TTTATCAAGAGCAACAAGAACAACAACTTTTGTC 1036489 33 100.0 34 ................................. ACCGTATCCGAAGTTAGTAATACTTTTTTTATTC 1036422 33 100.0 35 ................................. TCATCAGGTACAATCTCGCCTGTGTTTGTCCTAAA 1036354 33 100.0 35 ................................. CATGCGGATGATTTATTGTATTATGCAGCGGCCGC 1036286 33 100.0 34 ................................. AACGTGCCGATCGAGTCGATTGATAAAGGTTCGG 1036219 33 100.0 35 ................................. CTTTATTCCCGAAGATCGACTGTTTGAGCGTATGA 1036151 33 100.0 34 ................................. ATCCGGTTGTTCGCGTGTCCAACCGCTTCTTAAA 1036084 33 100.0 34 ................................. ATTGTGTGAGTGTTTAAACATAAACCCGATTTCC 1036017 33 100.0 35 ................................. AATAGCCGAGAAATCCGAGACGATGAGGCGGTTAC 1035949 33 100.0 34 ................................. CCTGGGCTGTAGTTGCCATTCACGTTGAGTCTTT 1035882 33 100.0 35 ................................. ACCTACTCGCCTTAATTACAGGTGCAAATATCATT 1035814 33 100.0 34 ................................. TTTTGTCTACAATGATTGTTTTCATTTTTAATCA 1035747 33 100.0 34 ................................. ATTTGGTTTTGACGTGCCTGAGGAAGAAGTTGTC 1035680 33 100.0 34 ................................. TCCGAGTGTGAGAATCATAGATAACCCTCCTTTT 1035613 33 100.0 33 ................................. AGCAGAAGGGGATCTCGTTGGCTTCGTTGGTGA 1035547 33 100.0 34 ................................. TCCGTTAATATGATAAACCGGAGCGAAAGTGATT 1035480 33 100.0 34 ................................. CTTTGCAGCAGAAAACGACCGCCTAAGCGATCAG 1035413 33 100.0 33 ................................. TCATGTTTTACTCCGATTTCCAAGTTTTTATTG 1035347 33 100.0 35 ................................. AGAAATAGCCTTAAATCCAGTGCAAGATTTTGAGG 1035279 33 100.0 34 ................................. AGGTGTGCGTTTCAATCCAAAATCACCCTTTCTA 1035212 33 100.0 36 ................................. TGATGTGGAATTATATATTTTTGAGGGAGAATTATC 1035143 33 100.0 36 ................................. AGCGAAGAAGAGCACGTAATAGACGAATGGCCAATA 1035074 33 100.0 34 ................................. CTTATTTATTTTTTGACCATATTATGCCAATTTT 1035007 33 100.0 34 ................................. AATTATTATCACAGTCATTTTGTGGCATAACAGA 1034940 33 100.0 35 ................................. GTCCCCTGAAACTTCTAGAACGATTTCCTGCACCC 1034872 33 100.0 34 ................................. ATTCGCACGCCATTTTCAGCGATAGAAATAAACT 1034805 33 100.0 34 ................................. CATATCACCCGATAATACACGTATCTCTTTTCCG 1034738 33 100.0 35 ................................. TTGTCGTCATAGTCATATACCAGTGATGCGATTCA 1034670 33 100.0 37 ................................. ACTTTATATAAAATAGGTGTATGTAATAGACTGCCAC 1034600 33 100.0 33 ................................. TTCTATGTTCGTGACAACGAACTTTTCTTGGTG 1034534 33 100.0 33 ................................. AGTAGGTAGTATCGTTCCATTCTGCTGGCTCCT 1034468 33 100.0 33 ................................. TCGTTCGGACGGCTTTTTTTACAAAACGCATAA 1034402 33 100.0 34 ................................. CGCGGTGAAATGGCAGAATTTGAATTTACGGACG 1034335 33 100.0 35 ................................. TGACATGCGAGCGAAGCGATCTAGCGCATCGTTCA 1034267 33 100.0 36 ................................. TCTGATAAACATACATGCAACCAGATGTGCGACCTT 1034198 33 93.9 0 .............C.A................. | ========== ====== ====== ====== ================================= ===================================== ================== 72 33 99.9 34 GTCGCTCTCTGTATGGAGAGCGTGGATTGAAAT # Left flank : ATACCGTTTGGAGTTCCCAGTGAATAGAGTTGGAGCGGTGCCTCTCCGACTGGTAACGTTTGCTCAAACCGTTCACCCGCTGTCGGACGATTCCCCCATCTATTTGAATTCTCTTCTTCCCACTTCCATACGTTTGGTAATTCATATTTTGTCATAGTAACGCCTCCTATTATGTAGTGACTCTATCATACTAACAGCGTGAAACTATTCCAACTGTTTGGTTTGCTGGCTGTTTGTATGATAGCTAGTTCTTAAAAAGTACTTGTGTAAGAAACAGTATTGATCTATATGAGCTTTTTCTTTCTGTGGGTTTGTAGTAAAAGGGTATGGTTCTACTTTTTTCACATTTGAATGTGCGAACCCTAAGTGCCCACGAAATCACCAGGAGGTTCGCGCATTTTTCTGGCGTTTTCCAACAGAAAATAACCTCTAATTGATAGACTATTCATTTTTTTCACTTTATGTAGTACACTGGGAGGGAGAAGATACAACATCTCGTA # Right flank : TAAAATAACACCATCAATCCTCCCCCACCACACATAAACCTAAAAGTCCCCAAGCTAATAAAAATAGCTTGGGGACTTTCTATAAATTATTGTGGCATATTTCCATTCATCTGCTGCTGAGCCTGACGCACTAATCGCTTTGTGATTTCTCCGCCGACGGATCCGTTGGCACGCGATGTGGAATCTGGTCCAAGATTAACACCGAATTCGTTTGCGATCTCTTCTTTCATTTGATTGATCGCTTGCTGGACGCCTGGTACTAATAATTGGTTTGAGTTGTTGTTGTTGCTGTTTGGCATGTTTCTCACCTCCTGACACTCATAGAATGGTCGATTTTCGAGAAACTATACATAAGAAAATAAACAGAGTTACATAAAATAAACGTCGTATTAAGTTTATTTTTGTATTATTTTGAAATTTGTTTACATTCCGATAAAGACTTGCTATAATCGATAACATCCTAGCTTCATAGAGGATAAGCTCGTACACATTTGACGTAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCTGTATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: R [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2272264-2265405 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031230.1 Sporosarcina sp. PTS2304 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 2272263 33 100.0 35 ................................. ATATTGGCGATAGTCTTCATAAATATCTATCCATC 2272195 33 100.0 36 ................................. ATAATCGTGATAACCTCGACCGTAAATAAATCCATC 2272126 33 100.0 34 ................................. CCGCAAAATCAATCACATCTATGCCGCCTGCGTG 2272059 33 100.0 33 ................................. AGGACACGCACGAATCATTTGGTCGATTTCATC 2271993 33 100.0 34 ................................. ATCTAAATCTAACATGTCGCCTTGAGCAAACTTA 2271926 33 100.0 33 ................................. TTTTTTTATTATCAACTCTGCTAACTCAAATGA 2271860 33 100.0 36 ................................. CAATGAAGCGCAAAAATTTGAACGACAGTTGCGTAG 2271791 33 100.0 34 ................................. TGATTTATTACCTGAAGCGGAAACGCTTGAAGTT 2271724 33 100.0 35 ................................. ATACGCTTACTGCTTATCATCTACATCACCCTTGT 2271656 33 100.0 34 ................................. ACTCTTGTAAAACTTCATGAGCTGATCGGTGTTA 2271589 33 100.0 36 ................................. AAAAATAGTATAATCAGAAAATATTTCCATGATAAA 2271520 33 100.0 34 ................................. TTAGTACGTCATCCCATGGTCTTGCCATCACTCC 2271453 33 100.0 34 ................................. ATCGAGTTTGAAGGTGTGGACGAATGACTAAAAA 2271386 33 100.0 34 ................................. ATTATGCTTTACCTGGGATCAAATCGAAGAAGCG 2271319 33 100.0 35 ................................. TGACTTTGTTTTATAATGCCGAATCACTTGTAACG 2271251 33 100.0 34 ................................. TCTCCTTTTGGGTAACAGTAAGAAAGTTGCGCCA 2271184 33 100.0 34 ................................. TTCTGATTCGACCGCTGAAACGAATCTAGCGTTA 2271117 33 100.0 34 ................................. TCCCTTGAATCTATAATTATCGTTAATGTTTTCA 2271050 33 100.0 35 ................................. TCGTCGTTGTCGTCTTTAACTTCAAATTTCATTGC 2270982 33 100.0 35 ................................. AAACAACCTTCTAAAATCCAGTTAAAAATGCCAGG 2270914 33 100.0 35 ................................. CAAATATATGTCAACTTCAAGCGTTTCCGCTTCAG 2270846 33 100.0 36 ................................. TTTCCCATTCGTAGGCTTTGCCAAAAATGCTATTAA 2270777 33 100.0 34 ................................. TATTAATACCATTATATCATCATATCGCTATATG 2270710 33 100.0 36 ................................. AAAGTACATAGCAGACAACACCTTTAAATACTTCAG 2270641 33 100.0 35 ................................. TAGTTGTGCGTCACAATCACAATTAATAGGTTTAC 2270573 33 100.0 35 ................................. GCAAGGTAAAGTCATACAGCAATTCATCGCAAAAG 2270505 33 100.0 33 ................................. GTCGATCAACGTTATCATCCTGACTGGGTCTTT 2270439 33 100.0 35 ................................. CTTTACGGTCTTTAATCTCGTCATAAGCAGAATTT 2270371 33 100.0 37 ................................. GGTAACGTTTAATAATTTTCGGAAAGTCAGTAGTATC 2270301 33 100.0 34 ................................. GCCAACTTCAAATTTCGCACTAGCAAACTCAATA 2270234 33 100.0 34 ................................. AGCATTGCCTAATTCGTTCAATCTAAATTTCTTT 2270167 33 100.0 35 ................................. TCCTACCCACCCAGACGCTCCCACGTGCTTTTTAA 2270099 33 100.0 34 ................................. TCACGTACAGCAAACCATTCTTTACTCTTGTAAA 2270032 33 100.0 34 ................................. CCTGTCTTACGATCAATCTCCCACTGATAACCGC 2269965 33 100.0 34 ................................. AACAGCTAACCAACGAATGAATAGCTTTGTTGTC 2269898 33 100.0 36 ................................. CCGAAAACTAAAATACGCTCGTCTGAATGGTTGGGT 2269829 33 100.0 33 ................................. TAGCGTGACGTTTGTGTTGCATCCGGCTAACCG 2269763 33 100.0 35 ................................. ATAAGTTTCTAAGGCTTTATACAGGTCATTCGTTT 2269695 33 100.0 34 ................................. AGAAAAGGTTTTGAATCCATGTCCAGTGGATTGA 2269628 33 100.0 36 ................................. TTGACTACCCGTTCGAATGATTGTCCTCATACGTTT 2269559 33 100.0 35 ................................. TATGGGTCTTTTAGTTATGATATCCAAAAGAGGAG 2269491 33 100.0 37 ................................. ATGTTTACGATGCTTCTAAACATACAATCATCTTCAC 2269421 33 100.0 34 ................................. CTTTACGGTCTTTAATCTCGTCATAAGCAGAATT 2269354 33 100.0 35 ................................. AAAAGGCAATACGGAAAAATAGCTATGGTCGCAGT 2269286 33 100.0 35 ................................. CTTTCGTTGACTTATTCAGTGTTCTCACCTCCTTT 2269218 33 100.0 34 ................................. CGCACAAATACTAGAGCGCTAGACGGTTGTTGTC 2269151 33 100.0 35 ................................. TATTTTGGTTTTTGGCAATAAAAAAGAACCGAATC 2269083 33 100.0 35 ................................. GTAGCGAGTTTTTAAATCACCTCGCAAAATAGCAT 2269015 33 100.0 34 ................................. TGCTGATACCCTCTAGTGGCCCCCGCTGAAACTT 2268948 33 100.0 34 ................................. CATTTGATCTGATATATCTACACCATTTACAGAT 2268881 33 100.0 35 ................................. ATCAAAAATATACGGGAATGATTCTGTTCCTTGTC 2268813 33 100.0 37 ................................. TACAAAAGACAAGGACACAACTGCGAAATGCACTCAC 2268743 33 100.0 36 ................................. ATCAATCGACATCTGACTTTCTTCTAGCGTGACGTT 2268674 33 100.0 36 ................................. TTTTTTTATTATCAACTCTGCTAACTCAAATGACAT 2268605 33 100.0 36 ................................. AGAAAGACGACAAGAAAGAAGTTTTGGAGTTTCATA 2268536 33 100.0 36 ................................. ATAGATGATTTGACCGCAGAACAGGTGTTGGATGCA 2268467 33 100.0 35 ................................. GAAACCATAAAGCGGCATTAAAAGGAAATCTAATG 2268399 33 100.0 35 ................................. CAATTTCGCGCCATTGGAATCAGCGGTCAATTTAA 2268331 33 100.0 34 ................................. ATCAATGGTGATTTGATCGTTCACGACCTCGACT 2268264 33 100.0 36 ................................. ATTATCGGACATCTTAGAGGATCAGGTGGACGAAAA 2268195 33 100.0 33 ................................. ACCCTCCAACTCTATTAATTTATCAATATAAAA 2268129 33 100.0 35 ................................. GCTATGGAGCTGATAAGGAAACTCTTTAAACGTTC 2268061 33 100.0 34 ................................. GTCCTGAACTTTTACGAATGATGTCATGGGAAGT 2267994 33 100.0 34 ................................. AAAACAATTATACTAACTAAGTGGGAAGTAACTT 2267927 33 100.0 35 ................................. GCTCGCATGGGTGCAATGTACGCATGGGCGAATCC 2267859 33 100.0 33 ................................. ACCGATGGTATTGGCGCGCAAATCAAGCAAATG 2267793 33 100.0 34 ................................. TGCAGCAGTTACAAATTGTCTGCCTGTCGTAATC 2267726 33 100.0 35 ................................. TTACACCTACCAGACTAATATCTGCATTAGCTTTG 2267658 33 100.0 33 ................................. CGACATACGTATTGTTATCGTATCGTATTTATT 2267592 33 100.0 34 ................................. CATTTCTTTTTGCCATTGCTTAAATGCTTGGTTT 2267525 33 100.0 33 ................................. TTTCGCCATTTCAATCATTTGCTTGATTTGCGC 2267459 33 100.0 33 ................................. TTTCACCCTCCTCTTTCCAGTAGACGACTTAAT 2267393 33 100.0 35 ................................. GTTCCATATTTTGCGTTCATGAGCACACAAGCTTG 2267325 33 100.0 35 ................................. GTCAATTTGCTTTAAATGCTCGGTAAAATCATAAA 2267257 33 100.0 34 ................................. AATATCGGACTTGATACGGTCAAAACGTGCTTTA 2267190 33 100.0 34 ................................. ACGCAGACATGATCTGATTCCGTATAATGAGTAC 2267123 33 100.0 35 ................................. TTTTAAGTAACCCCAAGGATGTACAGCGTGACGCA 2267055 33 100.0 34 ................................. ACAACAAACTTGGAAACGAAGAAGTTACTGTTGT 2266988 33 100.0 36 ................................. AGTACGAAAAGCTTCGTGGAGAGGAGGTGAAGGAAG 2266919 33 100.0 34 ................................. TCTAAAGCCATCGTTCCAGCGATGGCTTCCTTCT 2266852 33 100.0 34 ................................. TTGAGGATGAAGAGGAAGAGTATGGCGATGGGTT 2266785 33 100.0 35 ................................. AATGTCGGGCATAAAAACATTGAATGGTACTCATG 2266717 33 100.0 34 ................................. TTTGTTTGTTTGTTTCTTTTTTAATTCCTAACGT 2266650 33 100.0 34 ................................. TCCGTAACATTATTTATCAATTAGCTTCTTTGAC 2266583 33 100.0 35 ................................. GTTGATATGCCGAGCGAGTTCCTGATCGGTAACGA 2266515 33 100.0 35 ................................. GCACGAAACATTCTTTCCCATAGCGATTCGTTTGA 2266447 33 100.0 36 ................................. TCTAACTCCTGCACCCGCTCGACTTGTTGGATAAGC 2266378 33 100.0 35 ................................. GTTCAAAGCGTCATAAGTATCTCCCCAGCGCCCCA 2266310 33 100.0 34 ................................. CATTAGTCCGCTCATATTAAATTGCCTCCTTCAT 2266243 33 100.0 34 ................................. ATCTGCCGCTGATAATCCACCGTCAGATGCCTTT 2266176 33 100.0 33 ................................. CTGTGCCGCGATTTGTTGTTTTGTCATTTTTTC 2266110 33 100.0 35 ................................. ATCATCTGATTTTTCTAACTCACGAAGGACTTTAT 2266042 33 100.0 33 ................................. CTCATTTCTAATTGTTTTTTTGGCGCCGATGAT 2265976 33 100.0 33 ................................. TTTGTGCTGACACGTCAAACATTCGTACTTTGC 2265910 33 100.0 34 ................................. CGCCTGTTCGTGTTTTGCGATCTGTCCGTTTAAT 2265843 33 100.0 36 ................................. AAACCATTTGCTACGGATTTCCGAAATCTCTAACTC 2265774 33 100.0 34 ................................. ACTTCGTCTCGTAATTCGTTGAGTTGGATTGTCA 2265707 33 100.0 34 ................................. AGGCAATAAACCACCCTCTAATACGAGCGTAGCC 2265640 33 100.0 34 ................................. CGAGACGGTGACGAAGAACGTCCAGATGATCCTG 2265573 33 100.0 35 ................................. ATTAAATTACCTCCGAAATTGTGATGCGATAATTG 2265505 33 100.0 35 ................................. TATTGGTGACTTATCGGGTTCTATAGGTACTCTAA 2265437 33 97.0 0 ...............................G. | ========== ====== ====== ====== ================================= ===================================== ================== 102 33 100.0 35 GTCGCTCCCTGTATAGGGGGCGTGGATTGAAAT # Left flank : CGCGGTGATCTTGAAGCATATCCTCCTATTTTAATAAGGTAGGTGTTATGTAGTGCTTGTGTTAGTCACTTATGATGTACAGACTCTTACAGATGGCGGTAAAAAACGTTTACGCAGAATTGCTAAGAAGTGTGAAGAGTATGGCGTGCGTGTTCAAAATTCAGTGTTTGAATGTATTGTGGATAGCACTCAATTAAAACAATTAGAAATTGAGTTGGAAGAGATTATGGATCCTAAGGTCGATAGTCTGCGTTATTACCGTCTTGGAAATAATCATGATACAAAAGTTAGGCATGTAGGAGCAAAGCCTTCGCTTAAAGTAGAAGATCCCTTAATTTTTTAATGTGCGAACCTTAAGTGAACATGAAAACCTAGGGAGGTTCGCGCATAATTTAATGTAAATTTACGCTGAAATAAAGATAATATTTTTTAACAGTTATGTTAAAGTGTAAGAAGCACAAGATATAGATTTCGATATATATATTCGTCTATATCTTGCT # Right flank : TTCAAGTGTTTATGGTCAGTGTCTTCAGCCAAAATTGTCGATTCTTGTAGAAAGAGCATGAATAAAAATGCCGCTTTCTAGTATATTGAAGTAACACTAATAATGTTAAGCGTGAAGATAATAAACAACAGCTGTCCCACAATCTATTAAAACCATTCCCTGCATAGGAACCTCCAATCACTCTTATTCTAGCTTTTCAGCAGCACGTTCATCCAAATAACGATACAAAGTCGATTTACTAATACCGGTTTCCTCTTTTATTTCGTAAAGTGTATAATTTTTGCTGTCGTACATAGAAAATGCACGTTGTAAATTATCATCAGATTTACGTGGACGGCCGATTAGTTTTCCTTGTTGTTTTGCAGCTTGGAGAGAAAAAGTAGATGAATGGCTTAAAAAAGTAGATTGTATCTCTGCGAAAAATTCTATTTGTTCTATAAGTACCAATGTTTGCAGTGTTTCAGTTGATAACTTTTCATCAAGAAAATGAAATATAATTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTGTATAGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //