Array 1 4314100-4317487 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034657.1 Xanthomonas vasicola strain NCPPB 902 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 4314100 31 100.0 33 ............................... CCGGATGGGCTTGTGATGGCGTATATGCCTGCC 4314164 31 100.0 34 ............................... TGCCCGCCTTGTACCTGGATGAGGAAATCTTGGA 4314229 31 100.0 35 ............................... AGAAACATCTCCGCTGATTCCCGCGCAGCAGGCAA 4314295 31 100.0 35 ............................... CGGCCTTGCAGCATACTTGCGGAGACACGAAGATA 4314361 31 100.0 33 ............................... CCACACTGTGCGATCAAAGTAAGCTACCTCAAT 4314425 31 100.0 41 ............................... CTAGGGGTGGATGAAGCACAGACCCTACCGCACGCATTGCT 4314497 31 100.0 34 ............................... CTAGGGGGCATCGCCTGTGGGACGAACTTGTGGT 4314562 31 100.0 35 ............................... ATTTATGCATGGCCTCTCTGTATGGCCCTGTGTCG 4314628 31 100.0 36 ............................... TTTAGCCAGTTCACCATCGCCAAGCGTGGGCAAAAG 4314695 31 100.0 35 ............................... CTGCGCCCGGGGGCTCTAGTCTCTCTACACGGCCC 4314761 31 100.0 35 ............................... AGTGCATCCCACGCCTCTGCAATGGCGGACTTAAC 4314827 31 100.0 34 ............................... AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA 4314892 31 100.0 36 ............................... TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT 4314959 31 100.0 34 ............................... TTCCAAGTCCACCTTGTCATAGCCATACCGATTC 4315024 31 100.0 36 ............................... AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC 4315091 31 100.0 35 ............................... TTGACTCATGAGCACCGTGTGAGCGGTTTTATGTG 4315157 31 100.0 34 ............................... TGTAGTCTCCCCGTCTTTTTGCGTACATGGGCTT 4315222 31 100.0 34 ............................... TGTGTCACCTGTACCTCCTTCATCTCTAAGTTGA 4315287 31 100.0 36 ............................... ACCTCCCGCCCGAACAAATCCCGCTGGATCAGGATG 4315354 31 100.0 35 ............................... GCACCAAAGGCTATGGATGCCACCGTGGTGCAGTC 4315420 31 100.0 34 ............................... CCGGTGACGCCACCGCCGATGCGTATTGTTAAAT 4315485 31 100.0 34 ............................... TTTACATGCATCCCAAGAAGGGCCGAGGAGAAGC 4315550 31 100.0 34 ............................... AGGTCCGCCTGCAAGGCACCCTGCGCCATCAGAA 4315615 31 100.0 35 ............................... GTCAAACTCAATGTCAAGCCTGTAGTACATGCCTA 4315681 31 100.0 34 ............................... AACTGGGGTAGTGCACCTCAGAAATCAGCACTGT 4315746 31 100.0 34 ............................... CCAGACCGGGGCGGGCACATTACCCTCAATGTAG 4315811 31 100.0 33 ............................... TCCTGAGGCGATCAGGTCGCTCGCTGACGCCTG 4315875 31 100.0 34 ............................... CTGTCACTGACTCTTGCCCCCTGGCTACGCAGGA 4315940 31 100.0 35 ............................... CTGTTATTCAATACGGAAGTCAGGTTTTTGGTACT 4316006 31 100.0 34 ............................... AAAGGCCATGGTCCGGGCAACGGCATCCGAATCA 4316071 31 100.0 36 ............................... TTTTCGATGCTACTCATTTGCTTCTCCTCGGACCTT 4316138 31 100.0 34 ............................... TTCCAAGTCCACCTTGTCATAGCCATACCGATTC 4316203 31 100.0 36 ............................... AGGTTAGTCATGCGGACGCGGTAACGCAGGCCGGTC 4316270 31 100.0 34 ............................... CTGCAATACATTTTTGGACTTGGCTGGCGCAACC 4316335 31 100.0 35 ............................... GCGATCCAGCCATTTTTGTGTGCGGAACAGGTTGC 4316401 31 100.0 37 ............................... GTGTCCTCCTACGGTAGTGCCGTCATCACAACGCTGG 4316469 31 100.0 35 ............................... CAGCAGGGCAGCCAGTTGCAGGGCGCATACGGGTC 4316535 31 100.0 34 ............................... CTGTAAGTGCAGAAGCCCGTAGAAAAATGTCCTT 4316600 31 100.0 34 ............................... CTCCCACAGGCGATGCCCCTTAGGCACGTAAGTC 4316665 31 100.0 35 ............................... CACCCGATGCTATTGTGAGTAACTGGCCAACGGGA 4316731 31 100.0 33 ............................... AACGTGGGAAGTTTGGAGACCTGCAAGGTAATC 4316795 31 100.0 35 ............................... TGCGTCACGCGGGCGGTCAGCAGATTTACAGCAGA 4316861 31 100.0 36 ............................... CAAGAGACGGCATAAACGTGCCTTGCCTCTGTGCTT 4316928 31 100.0 34 ............................... GTTCTCTCTGTTGGTTGGGCTTGCGTCGGTTGGG 4316993 31 100.0 37 ............................... TTCTGCGGCAAGCGCCGGGTCGAGATTACCGGTGGGG 4317061 31 100.0 36 ............................... CTCTATCAGTCGGTCTAGCTCGGCGCGTTCGTGGTC 4317128 31 100.0 34 ............................... AGCAGTGCTGACTGTCCAATCTGCGATGGGCCCC 4317193 31 100.0 35 ............................... ACGCCAGAGTGCGCGGATCTCAAATGACGCCTTAC 4317259 31 100.0 36 ............................... GTGAGCGGCCCGTGCCTGGTCGGTCGCCTGGTTCGC 4317326 31 100.0 35 ............................... TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA 4317392 31 93.5 34 ..........GC................... AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 4317457 31 90.3 0 .............A.A.....A......... | ========== ====== ====== ====== =============================== ========================================= ================== 52 31 99.7 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCGCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : CACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //